RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 GAGE5Q13069 117 aa6.54□□□□□ -1.36
DDB1-211ENST00000538280 MIAQ16674 131 aa6.54□□□□□ -1.36
DDB1-211ENST00000538280 LINC00242Q5T6M2 205 aa6.54□□□□□ -1.36
DDB1-211ENST00000538280 GEMIN7Q9H840 131 aaKnown RBP6.54□□□□□ -1.36
DDB1-211ENST00000538280 CDKN2A-AS1Q9UH64 79 aa6.54□□□□□ -1.36
DDB1-211ENST00000538280 SORL1Q92673 2214 aa6.53□□□□□ -1.36
DDB1-211ENST00000538280 TCL1BO95988 128 aa6.53□□□□□ -1.36
DDB1-211ENST00000538280 COX6A2Q02221 97 aa6.53□□□□□ -1.36
DDB1-211ENST00000538280 FHL2Q14192 279 aa6.53□□□□□ -1.36
DDB1-211ENST00000538280 ADAMTSL4-AS1Q5T5F5 129 aa6.53□□□□□ -1.36
DDB1-211ENST00000538280 DGAT2L7PQ6IED9 249 aa6.53□□□□□ -1.36
DDB1-211ENST00000538280 KIR2DL5BQ8NHK3 375 aa6.53□□□□□ -1.36
DDB1-211ENST00000538280 TMEM101Q96IK0 257 aa6.53□□□□□ -1.36
DDB1-211ENST00000538280 LINC01600Q96MT4 127 aa6.53□□□□□ -1.36
DDB1-211ENST00000538280 CDC42SE2Q9NRR3 84 aa6.53□□□□□ -1.36
DDB1-211ENST00000538280 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.36
DDB1-211ENST00000538280 SMIM1B2RUZ4 78 aa6.52□□□□□ -1.37
DDB1-211ENST00000538280 M0QXV9 152 aa6.52□□□□□ -1.37
DDB1-211ENST00000538280 GAGE7O76087 117 aa6.52□□□□□ -1.37
DDB1-211ENST00000538280 GAGE12FP0CL80 117 aa6.52□□□□□ -1.37
DDB1-211ENST00000538280 GAGE12GP0CL81 117 aa6.52□□□□□ -1.37
DDB1-211ENST00000538280 GAGE12IP0CL82 117 aa6.52□□□□□ -1.37
DDB1-211ENST00000538280 IFITM1P13164 125 aa6.52□□□□□ -1.37
DDB1-211ENST00000538280 PCP4P48539 62 aa6.52□□□□□ -1.37
DDB1-211ENST00000538280 TMEM243Q9BU79 118 aa6.52□□□□□ -1.37
DDB1-211ENST00000538280 PPDPFQ9H3Y8 114 aa6.52□□□□□ -1.37
DDB1-211ENST00000538280 LOC107984156A0A0G2JMH3 177 aa6.51□□□□□ -1.37
DDB1-211ENST00000538280 A8MZ25 164 aa6.51□□□□□ -1.37
DDB1-211ENST00000538280 F5H768 121 aa6.51□□□□□ -1.37
DDB1-211ENST00000538280 PSMB2P49721 201 aa6.51□□□□□ -1.37
DDB1-211ENST00000538280 ETDBQ3ZM63 59 aa6.51□□□□□ -1.37
DDB1-211ENST00000538280 SH2D6Q7Z4S9 175 aa6.51□□□□□ -1.37
DDB1-211ENST00000538280 ARL17AQ8IVW1 177 aa6.51□□□□□ -1.37
DDB1-211ENST00000538280 ERG28Q9UKR5 140 aa6.51□□□□□ -1.37
DDB1-211ENST00000538280 COL7A1Q02388 2944 aa6.51□□□□□ -1.37
DDB1-211ENST00000538280 TRGV2A0A075B6R0 118 aa6.5□□□□□ -1.37
DDB1-211ENST00000538280 TRBV30A0A0K0K1B3 111 aa6.5□□□□□ -1.37
DDB1-211ENST00000538280 LOC100131303A0A0U1RQF7 123 aa6.5□□□□□ -1.37
DDB1-211ENST00000538280 INSL3P51460 131 aa6.5□□□□□ -1.37
DDB1-211ENST00000538280 X6R8D5 127 aa6.5□□□□□ -1.37
DDB1-211ENST00000538280 BIRC6Q9NR09 4857 aa6.49□□□□□ -1.37
DDB1-211ENST00000538280 TRGV4A0A0C4DH28 118 aa6.49□□□□□ -1.37
DDB1-211ENST00000538280 SMIM9A6NGZ8 99 aa6.49□□□□□ -1.37
DDB1-211ENST00000538280 J3QR89 54 aa6.49□□□□□ -1.37
DDB1-211ENST00000538280 PF4P02776 101 aa6.49□□□□□ -1.37
DDB1-211ENST00000538280 MTURNQ8N3F0 131 aa6.49□□□□□ -1.37
DDB1-211ENST00000538280 ZNF625Q96I27 306 aaPredicted RBP6.49□□□□□ -1.37
DDB1-211ENST00000538280 SPATA25Q9BR10 227 aa6.49□□□□□ -1.37
DDB1-211ENST00000538280 NOTCH3Q9UM47 2321 aa6.49□□□□□ -1.37
DDB1-211ENST00000538280 KPRPQ5T749 579 aaPredicted RBP6.48□□□□□ -1.37
DDB1-211ENST00000538280 C9orf66Q5T8R8 295 aa6.48□□□□□ -1.37
DDB1-211ENST00000538280 TRBV6-8A0A0A6YYG3 113 aa6.47□□□□□ -1.37
DDB1-211ENST00000538280 UBE2L6O14933 153 aa6.47□□□□□ -1.37
DDB1-211ENST00000538280 HERV-K104P63124 156 aa6.47□□□□□ -1.37
DDB1-211ENST00000538280 FOXI1Q12951 378 aa6.47□□□□□ -1.37
DDB1-211ENST00000538280 SFTA2Q6UW10 78 aa6.47□□□□□ -1.37
DDB1-211ENST00000538280 TEN1Q86WV5 123 aa6.47□□□□□ -1.37
DDB1-211ENST00000538280 Q9H8V8 135 aa6.47□□□□□ -1.37
DDB1-211ENST00000538280 DYNC2H1Q8NCM8 4307 aaKnown RBP6.47□□□□□ -1.37
DDB1-211ENST00000538280 TRAV13-1A0A0B4J241 112 aa6.46□□□□□ -1.38
DDB1-211ENST00000538280 TRIAP1O43715 76 aa6.46□□□□□ -1.38
DDB1-211ENST00000538280 SCGB1C2P0DMR2 95 aa6.46□□□□□ -1.38
DDB1-211ENST00000538280 CIRBPQ14011 172 aaKnown RBP6.46□□□□□ -1.38
DDB1-211ENST00000538280 LINC00308Q8TCZ7 52 aa6.46□□□□□ -1.38
DDB1-211ENST00000538280 PPDPFLQ8WWR9 84 aa6.46□□□□□ -1.38
DDB1-211ENST00000538280 CARD19Q96LW7 228 aa6.46□□□□□ -1.38
DDB1-211ENST00000538280 ICOSQ9Y6W8 199 aa6.46□□□□□ -1.38
DDB1-211ENST00000538280 SACSQ9NZJ4 4579 aa6.45□□□□□ -1.38
DDB1-211ENST00000538280 PRSS2P07478 247 aa6.45□□□□□ -1.38
DDB1-211ENST00000538280 GAGE6Q13070 117 aa6.45□□□□□ -1.38
DDB1-211ENST00000538280 ATXN8Q156A1 80 aa6.45□□□□□ -1.38
DDB1-211ENST00000538280 C21orf62-AS1Q17RA5 79 aa6.45□□□□□ -1.38
DDB1-211ENST00000538280 LINC01620Q4KN68 170 aa6.45□□□□□ -1.38
DDB1-211ENST00000538280 OXLD1Q5BKU9 147 aa6.45□□□□□ -1.38
DDB1-211ENST00000538280 SOSTDC1Q6X4U4 206 aa6.45□□□□□ -1.38
DDB1-211ENST00000538280 MRAPQ8TCY5 172 aa6.45□□□□□ -1.38
DDB1-211ENST00000538280 IGLV4-60A0A075B6I1 120 aa6.44□□□□□ -1.38
DDB1-211ENST00000538280 GAGE12HA6NDE8 117 aa6.44□□□□□ -1.38
DDB1-211ENST00000538280 LYRM9A8MSI8 78 aa6.44□□□□□ -1.38
DDB1-211ENST00000538280 SLC25A20O43772 301 aa6.44□□□□□ -1.38
DDB1-211ENST00000538280 Q1RN00 199 aa6.44□□□□□ -1.38
DDB1-211ENST00000538280 COPS9Q8WXC6 57 aa6.44□□□□□ -1.38
DDB1-211ENST00000538280 IGHV3OR16-9A0A0B4J2B5 98 aa6.43□□□□□ -1.38
DDB1-211ENST00000538280 TRBV10-2A0A0K0K1G8 114 aa6.43□□□□□ -1.38
DDB1-211ENST00000538280 C9JAW5 83 aa6.43□□□□□ -1.38
DDB1-211ENST00000538280 H7C2G1 150 aa6.43□□□□□ -1.38
DDB1-211ENST00000538280 RPL13AP40429 203 aaKnown RBP6.43□□□□□ -1.38
DDB1-211ENST00000538280 ANKRD29Q8N6D5 301 aa6.43□□□□□ -1.38
DDB1-211ENST00000538280 A0A087WZ39 114 aa6.42□□□□□ -1.38
DDB1-211ENST00000538280 A0A1B0GUV1 79 aa6.42□□□□□ -1.38
DDB1-211ENST00000538280 LST1O00453 97 aa6.42□□□□□ -1.38
DDB1-211ENST00000538280 SCGB1A1P11684 91 aa6.42□□□□□ -1.38
DDB1-211ENST00000538280 NPC2P61916 151 aa6.42□□□□□ -1.38
DDB1-211ENST00000538280 LINC01561Q8N1V8 128 aa6.42□□□□□ -1.38
DDB1-211ENST00000538280 DAND5Q8N907 189 aa6.42□□□□□ -1.38
DDB1-211ENST00000538280 COX7B2Q8TF08 81 aa6.42□□□□□ -1.38
DDB1-211ENST00000538280 CDIP1Q9H305 208 aa6.42□□□□□ -1.38
DDB1-211ENST00000538280 PRO0255Q9UI72 69 aa6.42□□□□□ -1.38
DDB1-211ENST00000538280 H3BT86 120 aa6.41□□□□□ -1.38
DDB1-211ENST00000538280 DEFB130BP0DP73 79 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms