RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TRBV7-6A0A0J9YX20 115 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 Q6ZQY7 126 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 UBE2DNLQ8IWF7 75 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 CCL18P55774 89 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 Q5XG85 94 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 BEAN1Q3B7T3 259 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 LINC00269Q8N2A0 174 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 MAP6D1Q9H9H5 199 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 CXCL6P80162 114 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 LYPD5Q6UWN5 251 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 NANOS2P60321 138 aaKnown RBP3.91□□□□□ -1.78
PTPRD-213ENST00000537002 COX6A2Q02221 97 aa3.9□□□□□ -1.78
PTPRD-213ENST00000537002 SMCR5Q8TEV8 140 aa3.9□□□□□ -1.78
PTPRD-213ENST00000537002 CELA1Q9UNI1 258 aa3.9□□□□□ -1.78
PTPRD-213ENST00000537002 PSPHP1O15172 72 aa3.9□□□□□ -1.79
PTPRD-213ENST00000537002 LINC00242Q5T6M2 205 aa3.9□□□□□ -1.79
PTPRD-213ENST00000537002 DOPEY2Q9Y3R5 2298 aa3.9□□□□□ -1.79
PTPRD-213ENST00000537002 K7EQG2 157 aa3.9□□□□□ -1.79
PTPRD-213ENST00000537002 CHCHD7Q9BUK0 85 aa3.9□□□□□ -1.79
PTPRD-213ENST00000537002 DEFB4AO15263 64 aa3.9□□□□□ -1.79
PTPRD-213ENST00000537002 EDN2P20800 178 aa3.9□□□□□ -1.79
PTPRD-213ENST00000537002 C1orf158Q8N1D5 194 aa3.9□□□□□ -1.79
PTPRD-213ENST00000537002 SMIM1B2RUZ4 78 aa3.89□□□□□ -1.79
PTPRD-213ENST00000537002 PSCAO43653 123 aa3.89□□□□□ -1.79
PTPRD-213ENST00000537002 A6NED7 52 aa3.89□□□□□ -1.79
PTPRD-213ENST00000537002 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
PTPRD-213ENST00000537002 ARHGAP32A7KAX9 2087 aa3.89□□□□□ -1.79
PTPRD-213ENST00000537002 A6NDX4 124 aa3.89□□□□□ -1.79
PTPRD-213ENST00000537002 WFDC10BQ8IUB3 73 aa3.89□□□□□ -1.79
PTPRD-213ENST00000537002 CHCHD10Q8WYQ3 142 aaPredicted RBP3.89□□□□□ -1.79
PTPRD-213ENST00000537002 XAGE1AQ9HD64 81 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 A0A1B0GW54 56 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 PRYO14603 147 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 A0A0J9YWU9 116 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 LOC100131303A0A0U1RQF7 123 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 C10orf99Q6UWK7 81 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 NTM-AS1Q6ZSK4 140 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 PRR15LQ9BU68 103 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 REG3AQ06141 175 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 LINC01561Q8N1V8 128 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 Q8N3U1 123 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 Q8N814 137 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 GVINP1Q7Z2Y8 2422 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 UBE2AP49459 152 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 WFDC13Q8IUB5 93 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 Q8N2B8 174 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 KLK12Q9UKR0 248 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 SPTBN2O15020 2390 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 IGHV4-30-2A0A087WSY4 118 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 LOC110117498A0A087WWA1 95 aa3.88□□□□□ -1.79
PTPRD-213ENST00000537002 H0Y9J4 135 aa3.87□□□□□ -1.79
PTPRD-213ENST00000537002 BBC3Q96PG8 261 aaPredicted RBP3.87□□□□□ -1.79
PTPRD-213ENST00000537002 PRR3P79522 188 aaKnown RBP3.87□□□□□ -1.79
PTPRD-213ENST00000537002 A0A087WZ39 114 aa3.87□□□□□ -1.79
PTPRD-213ENST00000537002 H7BZZ5 65 aa3.87□□□□□ -1.79
PTPRD-213ENST00000537002 PLAC8L1A1L4L8 177 aa3.87□□□□□ -1.79
PTPRD-213ENST00000537002 CCL24O00175 119 aa3.87□□□□□ -1.79
PTPRD-213ENST00000537002 FHL2Q14192 279 aa3.87□□□□□ -1.79
PTPRD-213ENST00000537002 FAM218AQ96MZ4 157 aa3.87□□□□□ -1.79
PTPRD-213ENST00000537002 COL27A1Q8IZC6 1860 aaPredicted RBP3.87□□□□□ -1.79
PTPRD-213ENST00000537002 LINC00167Q96N53 147 aa3.87□□□□□ -1.79
PTPRD-213ENST00000537002 LINC00336Q6ZUF6 198 aa3.87□□□□□ -1.79
PTPRD-213ENST00000537002 NDUFB1O75438 58 aa3.86□□□□□ -1.79
PTPRD-213ENST00000537002 TMEM254Q8TBM7 123 aa3.86□□□□□ -1.79
PTPRD-213ENST00000537002 TRBV6-8A0A0A6YYG3 113 aa3.86□□□□□ -1.79
PTPRD-213ENST00000537002 TRBV6-4A0A1B0GX49 114 aa3.86□□□□□ -1.79
PTPRD-213ENST00000537002 LY6G6DO95868 133 aa3.86□□□□□ -1.79
PTPRD-213ENST00000537002 CDC42SE2Q9NRR3 84 aa3.86□□□□□ -1.79
PTPRD-213ENST00000537002 DEFB114Q30KQ6 69 aa3.86□□□□□ -1.79
PTPRD-213ENST00000537002 LINC00959A0A1B0GUT2 108 aa3.86□□□□□ -1.79
PTPRD-213ENST00000537002 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
PTPRD-213ENST00000537002 COX17Q14061 63 aa3.86□□□□□ -1.79
PTPRD-213ENST00000537002 ESRGQ1W209 222 aa3.86□□□□□ -1.79
PTPRD-213ENST00000537002 APOC4P55056 127 aa3.85□□□□□ -1.79
PTPRD-213ENST00000537002 C4orf3Q8WVX3 66 aa3.85□□□□□ -1.79
PTPRD-213ENST00000537002 LINC00337Q8N6G1 96 aa3.85□□□□□ -1.79
PTPRD-213ENST00000537002 LINC00482Q8N8I6 264 aa3.85□□□□□ -1.79
PTPRD-213ENST00000537002 PCNX1Q96RV3 2341 aa3.85□□□□□ -1.79
PTPRD-213ENST00000537002 Q6ZSN1 163 aa3.85□□□□□ -1.79
PTPRD-213ENST00000537002 Q6ZVQ6 151 aa3.85□□□□□ -1.79
PTPRD-213ENST00000537002 WDR87Q6ZQQ6 2873 aa3.85□□□□□ -1.79
PTPRD-213ENST00000537002 SPTAN1Q13813 2472 aaKnown RBP3.85□□□□□ -1.79
PTPRD-213ENST00000537002 COL6A6A6NMZ7 2263 aa3.85□□□□□ -1.79
PTPRD-213ENST00000537002 ZNF73O43830 326 aaPredicted RBP3.85□□□□□ -1.79
PTPRD-213ENST00000537002 MUC4Q99102 2169 aa3.84□□□□□ -1.79
PTPRD-213ENST00000537002 C19orf84I3L1E1 186 aa3.84□□□□□ -1.79
PTPRD-213ENST00000537002 IGKV4-1P06312 121 aa3.84□□□□□ -1.79
PTPRD-213ENST00000537002 CD164Q04900 197 aa3.84□□□□□ -1.79
PTPRD-213ENST00000537002 PRR15Q8IV56 129 aa3.84□□□□□ -1.79
PTPRD-213ENST00000537002 A0A0C4DFX4 3053 aa3.84□□□□□ -1.79
PTPRD-213ENST00000537002 C9orf116Q5BN46 136 aaPredicted RBP3.84□□□□□ -1.79
PTPRD-213ENST00000537002 PRO0255Q9UI72 69 aa3.84□□□□□ -1.79
PTPRD-213ENST00000537002 LMO4P61968 165 aa3.84□□□□□ -1.8
PTPRD-213ENST00000537002 NCOR2Q9Y618 2525 aa3.84□□□□□ -1.8
PTPRD-213ENST00000537002 IGKV2-28A0A075B6P5 120 aa3.84□□□□□ -1.8
PTPRD-213ENST00000537002 IGKV2D-28P01615 120 aa3.84□□□□□ -1.8
PTPRD-213ENST00000537002 Q8N9L7 120 aa3.83□□□□□ -1.8
PTPRD-213ENST00000537002 DEFB135Q30KP9 77 aa3.83□□□□□ -1.8
PTPRD-213ENST00000537002 DNAJC9-AS1A6NH13 148 aa3.83□□□□□ -1.8
PTPRD-213ENST00000537002 C9orf66Q5T8R8 295 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms