RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 NOP10Q9NPE3 64 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 A0A0J9YXY3 114 aa9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 A4D1N5 150 aa9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 TMEM262E9PQX1 116 aa9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 SLC25A20O43772 301 aa9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 IGHV3-33P01772 117 aa9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 RNF183Q96D59 192 aa9.16□□□□□ -0.94
CDK5RAP3-202ENST00000536708 TRGV1A0A0A0MS02 117 aa9.15□□□□□ -0.94
CDK5RAP3-202ENST00000536708 CEMP1Q6PRD7 247 aaPredicted RBP9.15□□□□□ -0.94
CDK5RAP3-202ENST00000536708 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.15□□□□□ -0.95
CDK5RAP3-202ENST00000536708 IGHV4-28A0A0C4DH34 117 aa9.15□□□□□ -0.95
CDK5RAP3-202ENST00000536708 C9JAW5 83 aa9.15□□□□□ -0.95
CDK5RAP3-202ENST00000536708 TIRAPP58753 221 aa9.15□□□□□ -0.95
CDK5RAP3-202ENST00000536708 MUSTN1Q8IVN3 82 aa9.15□□□□□ -0.95
CDK5RAP3-202ENST00000536708 MRAPQ8TCY5 172 aa9.15□□□□□ -0.95
CDK5RAP3-202ENST00000536708 LITAFQ99732 161 aa9.15□□□□□ -0.95
CDK5RAP3-202ENST00000536708 DEFB121Q5J5C9 76 aa9.14□□□□□ -0.95
CDK5RAP3-202ENST00000536708 ZFAND6Q6FIF0 208 aa9.14□□□□□ -0.95
CDK5RAP3-202ENST00000536708 Q8NAQ8 132 aa9.14□□□□□ -0.95
CDK5RAP3-202ENST00000536708 VSIG2Q96IQ7 327 aa9.14□□□□□ -0.95
CDK5RAP3-202ENST00000536708 OVOL2Q9BRP0 275 aa9.14□□□□□ -0.95
CDK5RAP3-202ENST00000536708 STAB2Q8WWQ8 2551 aa9.14□□□□□ -0.95
CDK5RAP3-202ENST00000536708 IGHV3-64A0A075B6Q5 118 aa9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 IGLV5-45A0A087WSX0 123 aa9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 TRBV10-1A0A0K0K1A3 114 aa9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 IGKV2-29A2NJV5 120 aaPredicted RBP9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 SPANXDQ9BXN6 97 aa9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 SPANXCQ9NY87 97 aa9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 PRKDCP78527 4128 aaKnown RBP9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 GAGE7O76087 117 aa9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 GAGE12FP0CL80 117 aa9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 GAGE12GP0CL81 117 aa9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 GAGE12IP0CL82 117 aa9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 FAM19A3Q7Z5A8 133 aa9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 ANAPC13Q9BS18 74 aa9.13□□□□□ -0.95
CDK5RAP3-202ENST00000536708 LINC01600Q96MT4 127 aa9.12□□□□□ -0.95
CDK5RAP3-202ENST00000536708 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
CDK5RAP3-202ENST00000536708 CELA1Q9UNI1 258 aa9.12□□□□□ -0.95
CDK5RAP3-202ENST00000536708 CSDC2Q9Y534 153 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-202ENST00000536708 TRAV8-3A0A0A6YYJ7 113 aa9.12□□□□□ -0.95
CDK5RAP3-202ENST00000536708 TIMM17BO60830 172 aa9.12□□□□□ -0.95
CDK5RAP3-202ENST00000536708 DAZ2Q13117 558 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-202ENST00000536708 ATXN8Q156A1 80 aa9.12□□□□□ -0.95
CDK5RAP3-202ENST00000536708 LINC01620Q4KN68 170 aa9.12□□□□□ -0.95
CDK5RAP3-202ENST00000536708 TRAV4A0A0B4J268 109 aa9.11□□□□□ -0.95
CDK5RAP3-202ENST00000536708 IGHV3-38A0A0C4DH36 116 aa9.11□□□□□ -0.95
CDK5RAP3-202ENST00000536708 H7C2G1 150 aa9.11□□□□□ -0.95
CDK5RAP3-202ENST00000536708 RNASE13Q5GAN3 156 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-202ENST00000536708 HUWE1Q7Z6Z7 4374 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-202ENST00000536708 SMIM9A6NGZ8 99 aa9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 DEFB130BP0DP73 79 aa9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 DEFB130AP0DP74 79 aa9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 Q1RN00 199 aa9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 FAM222AQ5U5X8 452 aa9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 NTN5Q8WTR8 489 aaPredicted RBP9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 K7EQD1 137 aa9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 MIFP14174 115 aa9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 RPL36AP83881 106 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 DAZ4Q86SG3 579 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 RPL36ALQ969Q0 106 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 DAZ3Q9NR90 486 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-202ENST00000536708 TRGV2A0A075B6R0 118 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 TRBV10-2A0A0K0K1G8 114 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 RPL13AP40429 203 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 MIAQ16674 131 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 IGLV5-39A0A0G2JS06 123 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 TRBV30A0A0K0K1B3 111 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 TRIAP1O43715 76 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 IFITM1P13164 125 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 HERVK_113P63121 156 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 ADAMTSL4-AS1Q5T5F5 129 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 DGAT2L7PQ6IED9 249 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 CDKN2A-AS1Q9UH64 79 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 DNAH9Q9NYC9 4486 aa9.08□□□□□ -0.96
CDK5RAP3-202ENST00000536708 TRAV8-4A0A0B4J246 113 aa9.07□□□□□ -0.96
CDK5RAP3-202ENST00000536708 NDUFA1O15239 70 aa9.07□□□□□ -0.96
CDK5RAP3-202ENST00000536708 SNCGO76070 127 aa9.07□□□□□ -0.96
CDK5RAP3-202ENST00000536708 TMEM101Q96IK0 257 aa9.07□□□□□ -0.96
CDK5RAP3-202ENST00000536708 NHLRC4P0CG21 123 aaPredicted RBP9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 NTM-AS1Q6ZSK4 140 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 LINC00612Q8N6U2 182 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 TM2D3Q9BRN9 247 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 FBN3Q75N90 2809 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 GAGE2BQ13066 116 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 GAGE5Q13069 117 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 GAGE6Q13070 117 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 GAGE2EQ4V326 116 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 LINC00242Q5T6M2 205 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 Q6Q795 121 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 GAGE2DQ9UEU5 116 aa9.06□□□□□ -0.96
CDK5RAP3-202ENST00000536708 A0A0J9YWU9 116 aa9.05□□□□□ -0.96
CDK5RAP3-202ENST00000536708 COX6A2Q02221 97 aa9.05□□□□□ -0.96
CDK5RAP3-202ENST00000536708 ICOSQ9Y6W8 199 aa9.05□□□□□ -0.96
CDK5RAP3-202ENST00000536708 PRSS2P07478 247 aa9.04□□□□□ -0.96
CDK5RAP3-202ENST00000536708 LINC00694P0DN24 101 aa9.04□□□□□ -0.96
CDK5RAP3-202ENST00000536708 NDUFV3P56181 108 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP3-202ENST00000536708 SS18L2Q9UHA2 77 aa9.04□□□□□ -0.96
CDK5RAP3-202ENST00000536708 LYRM9A8MSI8 78 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms