RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CKS2P33552 79 aa8.05□□□□□ -1.12
PRKDC-207ENST00000536483 RPL32P62910 135 aaKnown RBP8.05□□□□□ -1.12
PRKDC-207ENST00000536483 MRPL51Q4U2R6 128 aaKnown RBP8.05□□□□□ -1.12
PRKDC-207ENST00000536483 MRPL52Q86TS9 123 aaKnown RBP8.05□□□□□ -1.12
PRKDC-207ENST00000536483 NRACQ8N912 160 aa8.05□□□□□ -1.12
PRKDC-207ENST00000536483 C9orf163Q8N9P6 203 aa8.05□□□□□ -1.12
PRKDC-207ENST00000536483 LINC01546A6NGU7 62 aa8.04□□□□□ -1.12
PRKDC-207ENST00000536483 VCYO14598 125 aa8.04□□□□□ -1.12
PRKDC-207ENST00000536483 LEPROTL1O95214 131 aa8.04□□□□□ -1.12
PRKDC-207ENST00000536483 C3orf79P0CE67 100 aa8.04□□□□□ -1.12
PRKDC-207ENST00000536483 DDTP30046 118 aa8.04□□□□□ -1.12
PRKDC-207ENST00000536483 KRTDAPP60985 99 aa8.04□□□□□ -1.12
PRKDC-207ENST00000536483 CNBPP62633 177 aaKnown RBP8.04□□□□□ -1.12
PRKDC-207ENST00000536483 LBHQ53QV2 105 aaPredicted RBP8.04□□□□□ -1.12
PRKDC-207ENST00000536483 CLPSL2Q6UWE3 100 aa8.04□□□□□ -1.12
PRKDC-207ENST00000536483 PET117Q6UWS5 81 aa8.04□□□□□ -1.12
PRKDC-207ENST00000536483 URB1-AS1Q96HZ7 61 aa8.04□□□□□ -1.12
PRKDC-207ENST00000536483 NXT2Q9NPJ8 142 aaKnown RBP8.04□□□□□ -1.12
PRKDC-207ENST00000536483 LINC00587B1AMM8 73 aa8.03□□□□□ -1.12
PRKDC-207ENST00000536483 D6R8Y8 96 aa8.03□□□□□ -1.12
PRKDC-207ENST00000536483 K7EMI3 77 aa8.03□□□□□ -1.12
PRKDC-207ENST00000536483 FAM19A2Q8N3H0 131 aa8.03□□□□□ -1.12
PRKDC-207ENST00000536483 C20orf78Q9BR46 151 aa8.03□□□□□ -1.12
PRKDC-207ENST00000536483 VAMP8Q9BV40 100 aa8.03□□□□□ -1.12
PRKDC-207ENST00000536483 MAP1LC3AQ9H492 121 aa8.03□□□□□ -1.12
PRKDC-207ENST00000536483 IGLV10-54A0A075B6I4 117 aa8.02□□□□□ -1.13
PRKDC-207ENST00000536483 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.02□□□□□ -1.13
PRKDC-207ENST00000536483 IGKV2-29A2NJV5 120 aaPredicted RBP8.02□□□□□ -1.13
PRKDC-207ENST00000536483 OXTP01178 125 aa8.02□□□□□ -1.13
PRKDC-207ENST00000536483 SUMO2P61956 95 aaKnown RBP8.02□□□□□ -1.13
PRKDC-207ENST00000536483 AMMECR1LQ6DCA0 310 aa8.02□□□□□ -1.13
PRKDC-207ENST00000536483 OR5A1Q8NGJ0 315 aa8.02□□□□□ -1.13
PRKDC-207ENST00000536483 MAP1LC3CQ9BXW4 147 aa8.02□□□□□ -1.13
PRKDC-207ENST00000536483 CSDC2Q9Y534 153 aaKnown RBP8.02□□□□□ -1.13
PRKDC-207ENST00000536483 SDIM1Q6ZPB5 146 aa8.01□□□□□ -1.13
PRKDC-207ENST00000536483 CDC42SE2Q9NRR3 84 aa8.01□□□□□ -1.13
PRKDC-207ENST00000536483 PKHD1L1Q86WI1 4243 aa8□□□□□ -1.13
PRKDC-207ENST00000536483 SMKR1H3BMG3 65 aa8□□□□□ -1.13
PRKDC-207ENST00000536483 SYS1-DBNDD2H3BUS1 97 aa8□□□□□ -1.13
PRKDC-207ENST00000536483 TCAPO15273 167 aa8□□□□□ -1.13
PRKDC-207ENST00000536483 CTAG1AP78358 180 aa8□□□□□ -1.13
PRKDC-207ENST00000536483 CFAP161Q6P656 301 aa8□□□□□ -1.13
PRKDC-207ENST00000536483 CHCHD10Q8WYQ3 142 aaPredicted RBP8□□□□□ -1.13
PRKDC-207ENST00000536483 TMEM101Q96IK0 257 aa8□□□□□ -1.13
PRKDC-207ENST00000536483 LINC01549A6NIU2 74 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 CCL25O15444 150 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 TNFRSF6BO95407 300 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 HBDP02042 147 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 SLPIP03973 132 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 G0S2P27469 103 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 CIRBPQ14011 172 aaKnown RBP7.99□□□□□ -1.13
PRKDC-207ENST00000536483 Q8N8P6 123 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 C15orf56Q8N910 161 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 KIR2DL4Q99706 377 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 MIEN1Q9BRT3 115 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 TIMM21Q9BVV7 248 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 PLA2G2DQ9UNK4 145 aa7.99□□□□□ -1.13
PRKDC-207ENST00000536483 LINC00959A0A1B0GUT2 108 aa7.98□□□□□ -1.13
PRKDC-207ENST00000536483 GAGE12HA6NDE8 117 aa7.98□□□□□ -1.13
PRKDC-207ENST00000536483 IFI27P40305 119 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-207ENST00000536483 RPL37AP61513 92 aaKnown RBP7.98□□□□□ -1.13
PRKDC-207ENST00000536483 SMAGPQ0VAQ4 97 aa7.98□□□□□ -1.13
PRKDC-207ENST00000536483 FOXI1Q12951 378 aa7.98□□□□□ -1.13
PRKDC-207ENST00000536483 PRO1933Q9H354 126 aa7.98□□□□□ -1.13
PRKDC-207ENST00000536483 NPYP01303 97 aa7.97□□□□□ -1.13
PRKDC-207ENST00000536483 FCER1GP30273 86 aa7.97□□□□□ -1.13
PRKDC-207ENST00000536483 UQCR10Q9UDW1 63 aa7.97□□□□□ -1.13
PRKDC-207ENST00000536483 UBE2D4Q9Y2X8 147 aa7.97□□□□□ -1.13
PRKDC-207ENST00000536483 GVQW2A0A096LPI5 108 aaPredicted RBP7.96□□□□□ -1.14
PRKDC-207ENST00000536483 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.96□□□□□ -1.14
PRKDC-207ENST00000536483 hDV102S1A0JD36 115 aa7.96□□□□□ -1.14
PRKDC-207ENST00000536483 HSBP1L1C9JCN9 74 aa7.96□□□□□ -1.14
PRKDC-207ENST00000536483 HNRNPA3P51991 378 aaKnown RBP7.96□□□□□ -1.14
PRKDC-207ENST00000536483 LINC01545Q5VT33 79 aa7.96□□□□□ -1.14
PRKDC-207ENST00000536483 CD164L2Q6UWJ8 174 aa7.96□□□□□ -1.14
PRKDC-207ENST00000536483 C14orf144Q96I85 54 aa7.96□□□□□ -1.14
PRKDC-207ENST00000536483 ATP5LO75964 103 aa7.95□□□□□ -1.14
PRKDC-207ENST00000536483 SPATA45Q537H7 98 aa7.95□□□□□ -1.14
PRKDC-207ENST00000536483 SMIM2Q9BVW6 85 aa7.95□□□□□ -1.14
PRKDC-207ENST00000536483 PAM16Q9Y3D7 125 aa7.95□□□□□ -1.14
PRKDC-207ENST00000536483 LOC389332A0A1B0GUA5 103 aa7.94□□□□□ -1.14
PRKDC-207ENST00000536483 SS18Q15532 418 aa7.94□□□□□ -1.14
PRKDC-207ENST00000536483 ORMDL2Q53FV1 153 aa7.94□□□□□ -1.14
PRKDC-207ENST00000536483 FAM104AQ969W3 186 aa7.94□□□□□ -1.14
PRKDC-207ENST00000536483 IGHV3-64A0A075B6Q5 118 aa7.93□□□□□ -1.14
PRKDC-207ENST00000536483 A0A096LNJ9 63 aa7.93□□□□□ -1.14
PRKDC-207ENST00000536483 IGKV3OR2-268A0A0C4DH90 116 aa7.93□□□□□ -1.14
PRKDC-207ENST00000536483 M0R143 59 aa7.93□□□□□ -1.14
PRKDC-207ENST00000536483 IGLC3P0DOY3 106 aa7.93□□□□□ -1.14
PRKDC-207ENST00000536483 IFI27L1Q96BM0 104 aa7.93□□□□□ -1.14
PRKDC-207ENST00000536483 PMCHL2Q9BQD1 86 aa7.93□□□□□ -1.14
PRKDC-207ENST00000536483 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.93□□□□□ -1.14
PRKDC-207ENST00000536483 IGHV1-58A0A0C4DH39 117 aa7.92□□□□□ -1.14
PRKDC-207ENST00000536483 PANO1I0J062 215 aa7.92□□□□□ -1.14
PRKDC-207ENST00000536483 XCL1P47992 114 aa7.92□□□□□ -1.14
PRKDC-207ENST00000536483 MRPS36P82909 103 aaKnown RBP7.92□□□□□ -1.14
PRKDC-207ENST00000536483 C2orf88Q9BSF0 95 aa7.92□□□□□ -1.14
PRKDC-207ENST00000536483 SPANXA1Q9NS26 97 aa7.92□□□□□ -1.14
PRKDC-207ENST00000536483 PYGO1Q9Y3Y4 419 aa7.91□□□□□ -1.14
PRKDC-207ENST00000536483 SPACA4Q8TDM5 124 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms