RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 C2orf66Q6UXQ4 117 aa8.36□□□□□ -1.07
PRKDC-206ENST00000536429 GNB1LQ9BYB4 327 aa8.36□□□□□ -1.07
PRKDC-206ENST00000536429 A0A087WYN8 130 aa8.35□□□□□ -1.07
PRKDC-206ENST00000536429 IGHV3OR16-9A0A0B4J2B5 98 aa8.35□□□□□ -1.07
PRKDC-206ENST00000536429 IGKV2-24A0A0C4DH68 120 aa8.35□□□□□ -1.07
PRKDC-206ENST00000536429 ZNF561-AS1K7EIQ3 104 aa8.35□□□□□ -1.07
PRKDC-206ENST00000536429 APOC3P02656 99 aa8.35□□□□□ -1.07
PRKDC-206ENST00000536429 CARD19Q96LW7 228 aa8.35□□□□□ -1.07
PRKDC-206ENST00000536429 CYSLTR1Q9Y271 337 aa8.35□□□□□ -1.07
PRKDC-206ENST00000536429 A0A096LNI7 61 aa8.34□□□□□ -1.07
PRKDC-206ENST00000536429 SYCNQ0VAF6 134 aa8.34□□□□□ -1.07
PRKDC-206ENST00000536429 ORMDL2Q53FV1 153 aa8.34□□□□□ -1.07
PRKDC-206ENST00000536429 Q6ZRU5 148 aa8.34□□□□□ -1.07
PRKDC-206ENST00000536429 LINC00173Q6ZV60 143 aa8.34□□□□□ -1.07
PRKDC-206ENST00000536429 TMEM141Q96I45 108 aa8.34□□□□□ -1.07
PRKDC-206ENST00000536429 ALKBH7Q9BT30 221 aaPredicted RBP8.34□□□□□ -1.07
PRKDC-206ENST00000536429 NXT2Q9NPJ8 142 aaKnown RBP8.34□□□□□ -1.07
PRKDC-206ENST00000536429 TGIF2-C20orf24A0A0A6YYL0 155 aa8.33□□□□□ -1.08
PRKDC-206ENST00000536429 IGIPA6NJ69 53 aa8.33□□□□□ -1.08
PRKDC-206ENST00000536429 MAJINQ3KP22 176 aa8.33□□□□□ -1.08
PRKDC-206ENST00000536429 LINC00242Q5T6M2 205 aa8.33□□□□□ -1.08
PRKDC-206ENST00000536429 DPH3Q96FX2 82 aa8.33□□□□□ -1.08
PRKDC-206ENST00000536429 MRPL18Q9H0U6 180 aaKnown RBP8.33□□□□□ -1.08
PRKDC-206ENST00000536429 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
PRKDC-206ENST00000536429 UBE2D1P51668 147 aa8.32□□□□□ -1.08
PRKDC-206ENST00000536429 RPL37AP61513 92 aaKnown RBP8.32□□□□□ -1.08
PRKDC-206ENST00000536429 SPAG11BQ08648 103 aa8.32□□□□□ -1.08
PRKDC-206ENST00000536429 FABP9Q0Z7S8 132 aa8.32□□□□□ -1.08
PRKDC-206ENST00000536429 AMELXQ99217 191 aa8.32□□□□□ -1.08
PRKDC-206ENST00000536429 PLAC8Q9NZF1 115 aa8.32□□□□□ -1.08
PRKDC-206ENST00000536429 K7EMI3 77 aa8.31□□□□□ -1.08
PRKDC-206ENST00000536429 HNRNPA3P51991 378 aaKnown RBP8.31□□□□□ -1.08
PRKDC-206ENST00000536429 TEX43Q6ZNM6 134 aa8.31□□□□□ -1.08
PRKDC-206ENST00000536429 ORAOV1Q8WV07 137 aa8.31□□□□□ -1.08
PRKDC-206ENST00000536429 CAMK2N2Q96S95 79 aa8.31□□□□□ -1.08
PRKDC-206ENST00000536429 A0A0J9YXV3 536 aa8.3□□□□□ -1.08
PRKDC-206ENST00000536429 APOMO95445 188 aa8.3□□□□□ -1.08
PRKDC-206ENST00000536429 TOMM6Q96B49 74 aa8.3□□□□□ -1.08
PRKDC-206ENST00000536429 C2orf48Q96LS8 159 aa8.3□□□□□ -1.08
PRKDC-206ENST00000536429 A0A087WZ39 114 aa8.29□□□□□ -1.08
PRKDC-206ENST00000536429 LINC01546A6NGU7 62 aa8.29□□□□□ -1.08
PRKDC-206ENST00000536429 MT-ND6P03923 174 aa8.29□□□□□ -1.08
PRKDC-206ENST00000536429 COX19Q49B96 90 aa8.29□□□□□ -1.08
PRKDC-206ENST00000536429 C10orf25Q5T742 122 aa8.29□□□□□ -1.08
PRKDC-206ENST00000536429 SVBPQ8N300 66 aa8.29□□□□□ -1.08
PRKDC-206ENST00000536429 STPG4Q8N801 248 aa8.29□□□□□ -1.08
PRKDC-206ENST00000536429 OR10D4PQ8NGN7 298 aa8.29□□□□□ -1.08
PRKDC-206ENST00000536429 VCX2Q9H322 139 aa8.29□□□□□ -1.08
PRKDC-206ENST00000536429 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.28□□□□□ -1.08
PRKDC-206ENST00000536429 SNAPINO95295 136 aa8.28□□□□□ -1.08
PRKDC-206ENST00000536429 PTTG1IPP53801 180 aa8.28□□□□□ -1.08
PRKDC-206ENST00000536429 KIAA0087Q14695 138 aa8.28□□□□□ -1.08
PRKDC-206ENST00000536429 Q6ZN92 141 aa8.28□□□□□ -1.08
PRKDC-206ENST00000536429 C2orf88Q9BSF0 95 aa8.28□□□□□ -1.08
PRKDC-206ENST00000536429 GAGE2BQ13066 116 aa8.27□□□□□ -1.09
PRKDC-206ENST00000536429 NDUFA5Q16718 116 aa8.27□□□□□ -1.09
PRKDC-206ENST00000536429 URB1-AS1Q96HZ7 61 aa8.27□□□□□ -1.09
PRKDC-206ENST00000536429 YPEL4Q96NS1 127 aa8.27□□□□□ -1.09
PRKDC-206ENST00000536429 TIMM17AQ99595 171 aa8.27□□□□□ -1.09
PRKDC-206ENST00000536429 TRAPPC1Q9Y5R8 145 aa8.27□□□□□ -1.09
PRKDC-206ENST00000536429 LOC107984640A0A0U1RRK4 108 aa8.26□□□□□ -1.09
PRKDC-206ENST00000536429 NPSP0C0P6 89 aa8.26□□□□□ -1.09
PRKDC-206ENST00000536429 UNQ6190/PRO20217Q6UXQ8 127 aa8.26□□□□□ -1.09
PRKDC-206ENST00000536429 FA2HQ7L5A8 372 aa8.26□□□□□ -1.09
PRKDC-206ENST00000536429 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
PRKDC-206ENST00000536429 C6orf48Q9UBA6 75 aa8.26□□□□□ -1.09
PRKDC-206ENST00000536429 A0A1W2PNN7 141 aa8.25□□□□□ -1.09
PRKDC-206ENST00000536429 ERASQ7Z444 233 aa8.25□□□□□ -1.09
PRKDC-206ENST00000536429 FAM19A3Q7Z5A8 133 aa8.25□□□□□ -1.09
PRKDC-206ENST00000536429 C18orf32Q8TCD1 76 aa8.25□□□□□ -1.09
PRKDC-206ENST00000536429 MRPL35Q9NZE8 188 aaKnown RBP8.25□□□□□ -1.09
PRKDC-206ENST00000536429 TNXBP22105 4242 aa8.24□□□□□ -1.09
PRKDC-206ENST00000536429 NDUFA1O15239 70 aa8.24□□□□□ -1.09
PRKDC-206ENST00000536429 G0S2P27469 103 aa8.24□□□□□ -1.09
PRKDC-206ENST00000536429 RPL18AQ02543 176 aaKnown RBP8.24□□□□□ -1.09
PRKDC-206ENST00000536429 C2orf82Q6UX34 121 aa8.24□□□□□ -1.09
PRKDC-206ENST00000536429 SLC7A5P1Q8MH63 180 aa8.24□□□□□ -1.09
PRKDC-206ENST00000536429 LINC00474Q9P2X8 69 aa8.24□□□□□ -1.09
PRKDC-206ENST00000536429 A0A096LNJ9 63 aa8.23□□□□□ -1.09
PRKDC-206ENST00000536429 RNF151Q2KHN1 245 aa8.23□□□□□ -1.09
PRKDC-206ENST00000536429 CBLN2Q8IUK8 224 aa8.23□□□□□ -1.09
PRKDC-206ENST00000536429 SMCO4Q9NRQ5 59 aa8.23□□□□□ -1.09
PRKDC-206ENST00000536429 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
PRKDC-206ENST00000536429 PKIGQ9Y2B9 76 aa8.23□□□□□ -1.09
PRKDC-206ENST00000536429 KRTAP29-1A8MX34 341 aaPredicted RBP8.22□□□□□ -1.09
PRKDC-206ENST00000536429 PMCHL1Q16048 86 aa8.22□□□□□ -1.09
PRKDC-206ENST00000536429 PAPPA-AS1Q5QFB9 102 aa8.22□□□□□ -1.09
PRKDC-206ENST00000536429 Q6ZRP5 223 aa8.22□□□□□ -1.09
PRKDC-206ENST00000536429 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
PRKDC-206ENST00000536429 F8WDY8 70 aa8.21□□□□□ -1.1
PRKDC-206ENST00000536429 HERVK_113P63121 156 aa8.21□□□□□ -1.1
PRKDC-206ENST00000536429 C9orf116Q5BN46 136 aaPredicted RBP8.21□□□□□ -1.1
PRKDC-206ENST00000536429 C7orf33Q8WU49 177 aa8.21□□□□□ -1.1
PRKDC-206ENST00000536429 CST9LQ9H4G1 147 aa8.21□□□□□ -1.1
PRKDC-206ENST00000536429 TOMM7Q9P0U1 55 aa8.21□□□□□ -1.1
PRKDC-206ENST00000536429 J3QL48 77 aa8.2□□□□□ -1.1
PRKDC-206ENST00000536429 LINC00614P0C842 121 aa8.2□□□□□ -1.1
PRKDC-206ENST00000536429 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
PRKDC-206ENST00000536429 GEMIN7Q9H840 131 aaKnown RBP8.2□□□□□ -1.1
PRKDC-206ENST00000536429 HMCN2Q8NDA2 5059 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms