RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 PTTG1IPP53801 180 aa10.12□□□□□ -0.79
CLSTN3-204ENST00000535313 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
CLSTN3-204ENST00000535313 C5orf38Q86SI9 138 aa10.12□□□□□ -0.79
CLSTN3-204ENST00000535313 SMIM2Q9BVW6 85 aa10.12□□□□□ -0.79
CLSTN3-204ENST00000535313 RPL39P62891 51 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-204ENST00000535313 RHEBQ15382 184 aa10.11□□□□□ -0.79
CLSTN3-204ENST00000535313 C2orf48Q96LS8 159 aa10.11□□□□□ -0.79
CLSTN3-204ENST00000535313 IMMP2LQ96T52 175 aa10.11□□□□□ -0.79
CLSTN3-204ENST00000535313 PPBPP02775 128 aa10.1□□□□□ -0.79
CLSTN3-204ENST00000535313 ATP5L2Q7Z4Y8 100 aa10.1□□□□□ -0.79
CLSTN3-204ENST00000535313 RPS10P5Q9NQ39 176 aa10.1□□□□□ -0.79
CLSTN3-204ENST00000535313 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
CLSTN3-204ENST00000535313 NPYP01303 97 aa10.09□□□□□ -0.79
CLSTN3-204ENST00000535313 SPAG11BQ08648 103 aa10.09□□□□□ -0.79
CLSTN3-204ENST00000535313 Q6ZRP5 223 aa10.09□□□□□ -0.79
CLSTN3-204ENST00000535313 UBR4Q5T4S7 5183 aa10.09□□□□□ -0.79
CLSTN3-204ENST00000535313 ORMDL3Q8N138 153 aa10.08□□□□□ -0.8
CLSTN3-204ENST00000535313 SVBPQ8N300 66 aa10.08□□□□□ -0.8
CLSTN3-204ENST00000535313 YPEL4Q96NS1 127 aa10.08□□□□□ -0.8
CLSTN3-204ENST00000535313 SNAPINO95295 136 aa10.07□□□□□ -0.8
CLSTN3-204ENST00000535313 RAB5AP20339 215 aa10.07□□□□□ -0.8
CLSTN3-204ENST00000535313 MRPS36P82909 103 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-204ENST00000535313 NDUFA5Q16718 116 aa10.07□□□□□ -0.8
CLSTN3-204ENST00000535313 SPINK6Q6UWN8 80 aa10.07□□□□□ -0.8
CLSTN3-204ENST00000535313 OR10D4PQ8NGN7 298 aa10.07□□□□□ -0.8
CLSTN3-204ENST00000535313 LINC01600Q96MT4 127 aa10.07□□□□□ -0.8
CLSTN3-204ENST00000535313 TNXBP22105 4242 aa10.06□□□□□ -0.8
CLSTN3-204ENST00000535313 TRAV9-1A0A075B6T8 112 aa10.06□□□□□ -0.8
CLSTN3-204ENST00000535313 IFITM10A6NMD0 228 aa10.06□□□□□ -0.8
CLSTN3-204ENST00000535313 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-204ENST00000535313 RPL18AQ02543 176 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-204ENST00000535313 REG3GQ6UW15 175 aa10.06□□□□□ -0.8
CLSTN3-204ENST00000535313 TMEM136Q6ZRR5 245 aa10.06□□□□□ -0.8
CLSTN3-204ENST00000535313 OPRPNQ99935 248 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-204ENST00000535313 RNF151Q2KHN1 245 aa10.05□□□□□ -0.8
CLSTN3-204ENST00000535313 ORAOV1Q8WV07 137 aa10.05□□□□□ -0.8
CLSTN3-204ENST00000535313 FAM104AQ969W3 186 aa10.05□□□□□ -0.8
CLSTN3-204ENST00000535313 PRELID3AQ96N28 172 aa10.05□□□□□ -0.8
CLSTN3-204ENST00000535313 IGHV3OR16-9A0A0B4J2B5 98 aa10.04□□□□□ -0.8
CLSTN3-204ENST00000535313 A0A1W2PNN7 141 aa10.04□□□□□ -0.8
CLSTN3-204ENST00000535313 F8WDY8 70 aa10.04□□□□□ -0.8
CLSTN3-204ENST00000535313 IFI27P40305 119 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-204ENST00000535313 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-204ENST00000535313 TGIF2-C20orf24A0A0A6YYL0 155 aa10.03□□□□□ -0.8
CLSTN3-204ENST00000535313 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
CLSTN3-204ENST00000535313 MRPL35Q9NZE8 188 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-204ENST00000535313 NDUFA1O15239 70 aa10.02□□□□□ -0.81
CLSTN3-204ENST00000535313 SRSF9Q13242 221 aaKnown RBP eCLIP10.02□□□□□ -0.81
CLSTN3-204ENST00000535313 CBLN2Q8IUK8 224 aa10.02□□□□□ -0.81
CLSTN3-204ENST00000535313 LAMTOR2Q9Y2Q5 125 aa10.01□□□□□ -0.81
CLSTN3-204ENST00000535313 PYGO1Q9Y3Y4 419 aa10.01□□□□□ -0.81
CLSTN3-204ENST00000535313 LOC389332A0A1B0GUA5 103 aa10□□□□□ -0.81
CLSTN3-204ENST00000535313 MT-ND6P03923 174 aa10□□□□□ -0.81
CLSTN3-204ENST00000535313 MAP1LC3AQ9H492 121 aa10□□□□□ -0.81
CLSTN3-204ENST00000535313 PRSS47A8MTI9 375 aa9.99□□□□□ -0.81
CLSTN3-204ENST00000535313 S100PP25815 95 aa9.99□□□□□ -0.81
CLSTN3-204ENST00000535313 TMEM141Q96I45 108 aa9.99□□□□□ -0.81
CLSTN3-204ENST00000535313 IGLV4-3A0A075B6K6 122 aa9.98□□□□□ -0.81
CLSTN3-204ENST00000535313 A0A087WZ39 114 aa9.98□□□□□ -0.81
CLSTN3-204ENST00000535313 KIAA1644Q3SXP7 199 aa9.98□□□□□ -0.81
CLSTN3-204ENST00000535313 C10orf25Q5T742 122 aa9.98□□□□□ -0.81
CLSTN3-204ENST00000535313 UNQ6190/PRO20217Q6UXQ8 127 aa9.98□□□□□ -0.81
CLSTN3-204ENST00000535313 PHF5AQ7RTV0 110 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-204ENST00000535313 PSORS1C2Q9UIG4 136 aa9.98□□□□□ -0.81
CLSTN3-204ENST00000535313 TLX1NBP0CAT3 122 aa9.97□□□□□ -0.81
CLSTN3-204ENST00000535313 LINC00242Q5T6M2 205 aa9.97□□□□□ -0.81
CLSTN3-204ENST00000535313 TEX43Q6ZNM6 134 aa9.97□□□□□ -0.81
CLSTN3-204ENST00000535313 Q8N8P6 123 aa9.97□□□□□ -0.81
CLSTN3-204ENST00000535313 C2orf88Q9BSF0 95 aa9.97□□□□□ -0.81
CLSTN3-204ENST00000535313 GNB1LQ9BYB4 327 aa9.97□□□□□ -0.81
CLSTN3-204ENST00000535313 SCO1O75880 301 aa9.96□□□□□ -0.82
CLSTN3-204ENST00000535313 KRTAP10-8P60410 259 aa9.96□□□□□ -0.82
CLSTN3-204ENST00000535313 C1orf137Q5JT78 98 aa9.96□□□□□ -0.82
CLSTN3-204ENST00000535313 Q6ZN92 141 aa9.96□□□□□ -0.82
CLSTN3-204ENST00000535313 C6orf48Q9UBA6 75 aa9.96□□□□□ -0.82
CLSTN3-204ENST00000535313 CYSLTR1Q9Y271 337 aa9.96□□□□□ -0.82
CLSTN3-204ENST00000535313 GAGE2EQ4V326 116 aa9.95□□□□□ -0.82
CLSTN3-204ENST00000535313 ORMDL2Q53FV1 153 aa9.95□□□□□ -0.82
CLSTN3-204ENST00000535313 C2orf66Q6UXQ4 117 aa9.95□□□□□ -0.82
CLSTN3-204ENST00000535313 GAGE2DQ9UEU5 116 aa9.95□□□□□ -0.82
CLSTN3-204ENST00000535313 UBE2D1P51668 147 aa9.94□□□□□ -0.82
CLSTN3-204ENST00000535313 KIAA0087Q14695 138 aa9.94□□□□□ -0.82
CLSTN3-204ENST00000535313 MRPL18Q9H0U6 180 aaKnown RBP9.94□□□□□ -0.82
CLSTN3-204ENST00000535313 VCX2Q9H322 139 aa9.94□□□□□ -0.82
CLSTN3-204ENST00000535313 SMCO4Q9NRQ5 59 aa9.94□□□□□ -0.82
CLSTN3-204ENST00000535313 TRBV30A0A0K0K1B3 111 aa9.93□□□□□ -0.82
CLSTN3-204ENST00000535313 FAM168BA1KXE4 195 aa9.93□□□□□ -0.82
CLSTN3-204ENST00000535313 K7EMI3 77 aa9.93□□□□□ -0.82
CLSTN3-204ENST00000535313 LINC01561Q8N1V8 128 aa9.93□□□□□ -0.82
CLSTN3-204ENST00000535313 PACRGQ96M98 296 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-204ENST00000535313 ALKBH7Q9BT30 221 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-204ENST00000535313 ODF1Q14990 250 aa9.92□□□□□ -0.82
CLSTN3-204ENST00000535313 COX19Q49B96 90 aa9.92□□□□□ -0.82
CLSTN3-204ENST00000535313 FAM19A5Q7Z5A7 132 aaPredicted RBP9.92□□□□□ -0.82
CLSTN3-204ENST00000535313 NXT2Q9NPJ8 142 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-204ENST00000535313 LRP2P98164 4655 aa9.92□□□□□ -0.82
CLSTN3-204ENST00000535313 COLCA2A8K830 154 aa9.91□□□□□ -0.82
CLSTN3-204ENST00000535313 ATP6V1G1O75348 118 aa9.91□□□□□ -0.82
CLSTN3-204ENST00000535313 PRSS2P07478 247 aa9.91□□□□□ -0.82
CLSTN3-204ENST00000535313 NPSP0C0P6 89 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms