RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 FAM19A3Q7Z5A8 133 aa6.56□□□□□ -1.36
CSDE1-217ENST00000534699 SVBPQ8N300 66 aa6.56□□□□□ -1.36
CSDE1-217ENST00000534699 MAP1LC3AQ9H492 121 aa6.56□□□□□ -1.36
CSDE1-217ENST00000534699 IFI27P40305 119 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-217ENST00000534699 PTTG1IPP53801 180 aa6.55□□□□□ -1.36
CSDE1-217ENST00000534699 MAJINQ3KP22 176 aa6.55□□□□□ -1.36
CSDE1-217ENST00000534699 ORMDL2Q53FV1 153 aa6.55□□□□□ -1.36
CSDE1-217ENST00000534699 SPINK6Q6UWN8 80 aa6.55□□□□□ -1.36
CSDE1-217ENST00000534699 TMEM136Q6ZRR5 245 aa6.55□□□□□ -1.36
CSDE1-217ENST00000534699 PRELID3AQ96N28 172 aa6.55□□□□□ -1.36
CSDE1-217ENST00000534699 D6R8Y8 96 aa6.55□□□□□ -1.36
CSDE1-217ENST00000534699 SMKR1H3BMG3 65 aa6.55□□□□□ -1.36
CSDE1-217ENST00000534699 Q8N8P6 123 aa6.55□□□□□ -1.36
CSDE1-217ENST00000534699 CARHSP1Q9Y2V2 147 aaKnown RBP6.55□□□□□ -1.36
CSDE1-217ENST00000534699 PKHD1L1Q86WI1 4243 aa6.54□□□□□ -1.36
CSDE1-217ENST00000534699 TMEM218A2RU14 115 aa6.54□□□□□ -1.36
CSDE1-217ENST00000534699 PANO1I0J062 215 aa6.54□□□□□ -1.36
CSDE1-217ENST00000534699 SEC11AP67812 179 aa6.54□□□□□ -1.36
CSDE1-217ENST00000534699 SRSF3P84103 164 aaKnown RBP6.54□□□□□ -1.36
CSDE1-217ENST00000534699 Q6ZRP5 223 aa6.54□□□□□ -1.36
CSDE1-217ENST00000534699 STPG4Q8N801 248 aa6.54□□□□□ -1.36
CSDE1-217ENST00000534699 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
CSDE1-217ENST00000534699 NXT2Q9NPJ8 142 aaKnown RBP6.54□□□□□ -1.36
CSDE1-217ENST00000534699 REG3GQ6UW15 175 aa6.54□□□□□ -1.36
CSDE1-217ENST00000534699 CAMK2N2Q96S95 79 aa6.54□□□□□ -1.36
CSDE1-217ENST00000534699 A0A096LNI7 61 aa6.53□□□□□ -1.36
CSDE1-217ENST00000534699 TGIF2-C20orf24A0A0A6YYL0 155 aa6.53□□□□□ -1.36
CSDE1-217ENST00000534699 IGHV3OR16-9A0A0B4J2B5 98 aa6.53□□□□□ -1.36
CSDE1-217ENST00000534699 NPYP01303 97 aa6.53□□□□□ -1.36
CSDE1-217ENST00000534699 PRR3P79522 188 aaKnown RBP6.53□□□□□ -1.36
CSDE1-217ENST00000534699 MRPL54Q6P161 138 aaKnown RBP6.53□□□□□ -1.36
CSDE1-217ENST00000534699 Q6ZUT4 128 aa6.53□□□□□ -1.36
CSDE1-217ENST00000534699 NDUFA1O15239 70 aa6.53□□□□□ -1.36
CSDE1-217ENST00000534699 C2orf88Q9BSF0 95 aa6.53□□□□□ -1.36
CSDE1-217ENST00000534699 TRBV30A0A0K0K1B3 111 aa6.53□□□□□ -1.36
CSDE1-217ENST00000534699 SNAPINO95295 136 aa6.53□□□□□ -1.36
CSDE1-217ENST00000534699 CYSLTR1Q9Y271 337 aa6.53□□□□□ -1.36
CSDE1-217ENST00000534699 A0A087WZ39 114 aa6.52□□□□□ -1.37
CSDE1-217ENST00000534699 SPAG11BQ08648 103 aa6.52□□□□□ -1.37
CSDE1-217ENST00000534699 TMEM141Q96I45 108 aa6.52□□□□□ -1.37
CSDE1-217ENST00000534699 SEC11CQ9BY50 192 aa6.52□□□□□ -1.37
CSDE1-217ENST00000534699 PCP4L1A6NKN8 68 aa6.52□□□□□ -1.37
CSDE1-217ENST00000534699 IFITM10A6NMD0 228 aa6.52□□□□□ -1.37
CSDE1-217ENST00000534699 Q6ZN92 141 aa6.52□□□□□ -1.37
CSDE1-217ENST00000534699 TRAV13-1A0A0B4J241 112 aa6.51□□□□□ -1.37
CSDE1-217ENST00000534699 CHTF8P0CG12 524 aa6.51□□□□□ -1.37
CSDE1-217ENST00000534699 TEX43Q6ZNM6 134 aa6.51□□□□□ -1.37
CSDE1-217ENST00000534699 LINC01600Q96MT4 127 aa6.51□□□□□ -1.37
CSDE1-217ENST00000534699 AMELXQ99217 191 aa6.5□□□□□ -1.37
CSDE1-217ENST00000534699 ORAOV1Q8WV07 137 aa6.5□□□□□ -1.37
CSDE1-217ENST00000534699 FAM104AQ969W3 186 aa6.5□□□□□ -1.37
CSDE1-217ENST00000534699 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
CSDE1-217ENST00000534699 DMBT1Q9UGM3 2413 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-217ENST00000534699 IGLV4-3A0A075B6K6 122 aa6.49□□□□□ -1.37
CSDE1-217ENST00000534699 LINC01546A6NGU7 62 aa6.49□□□□□ -1.37
CSDE1-217ENST00000534699 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-217ENST00000534699 SRSF9Q13242 221 aaKnown RBP eCLIP6.49□□□□□ -1.37
CSDE1-217ENST00000534699 IGKV2-24A0A0C4DH68 120 aa6.49□□□□□ -1.37
CSDE1-217ENST00000534699 ADCYAP1P18509 176 aa6.49□□□□□ -1.37
CSDE1-217ENST00000534699 HNRNPA3P51991 378 aaKnown RBP6.49□□□□□ -1.37
CSDE1-217ENST00000534699 C12orf57Q99622 126 aa6.49□□□□□ -1.37
CSDE1-217ENST00000534699 MT-ND6P03923 174 aa6.48□□□□□ -1.37
CSDE1-217ENST00000534699 S100PP25815 95 aa6.48□□□□□ -1.37
CSDE1-217ENST00000534699 CXCL5P42830 114 aa6.48□□□□□ -1.37
CSDE1-217ENST00000534699 UBE2D1P51668 147 aa6.48□□□□□ -1.37
CSDE1-217ENST00000534699 LINC00469Q8N7U9 141 aa6.48□□□□□ -1.37
CSDE1-217ENST00000534699 RPL39P62891 51 aaKnown RBP6.48□□□□□ -1.37
CSDE1-217ENST00000534699 C5orf38Q86SI9 138 aa6.48□□□□□ -1.37
CSDE1-217ENST00000534699 VCX2Q9H322 139 aa6.48□□□□□ -1.37
CSDE1-217ENST00000534699 FAT1Q14517 4588 aa6.47□□□□□ -1.37
CSDE1-217ENST00000534699 MT1HL1P0DM35 61 aa6.47□□□□□ -1.37
CSDE1-217ENST00000534699 HERVK_113P63121 156 aa6.47□□□□□ -1.37
CSDE1-217ENST00000534699 C2orf66Q6UXQ4 117 aa6.47□□□□□ -1.37
CSDE1-217ENST00000534699 GNB1LQ9BYB4 327 aa6.47□□□□□ -1.37
CSDE1-217ENST00000534699 AKR1D1P51857 326 aa6.47□□□□□ -1.37
CSDE1-217ENST00000534699 LINC00242Q5T6M2 205 aa6.47□□□□□ -1.37
CSDE1-217ENST00000534699 PLA2G2DQ9UNK4 145 aa6.47□□□□□ -1.37
CSDE1-217ENST00000534699 RAB5BP61020 215 aa6.46□□□□□ -1.37
CSDE1-217ENST00000534699 GAGE2BQ13066 116 aa6.46□□□□□ -1.37
CSDE1-217ENST00000534699 CBLN2Q8IUK8 224 aa6.46□□□□□ -1.37
CSDE1-217ENST00000534699 Q8IZM0 81 aa6.46□□□□□ -1.37
CSDE1-217ENST00000534699 SMCO4Q9NRQ5 59 aa6.46□□□□□ -1.37
CSDE1-217ENST00000534699 A0A0J9YXV3 536 aa6.46□□□□□ -1.38
CSDE1-217ENST00000534699 IGIPA6NJ69 53 aa6.46□□□□□ -1.38
CSDE1-217ENST00000534699 SMIM6P0DI80 62 aa6.46□□□□□ -1.38
CSDE1-217ENST00000534699 KIAA0087Q14695 138 aa6.46□□□□□ -1.38
CSDE1-217ENST00000534699 TOMM6Q96B49 74 aa6.46□□□□□ -1.38
CSDE1-217ENST00000534699 PACRGQ96M98 296 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-217ENST00000534699 FLG2Q5D862 2391 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-217ENST00000534699 COLCA2A8K830 154 aa6.44□□□□□ -1.38
CSDE1-217ENST00000534699 RHEBQ15382 184 aa6.44□□□□□ -1.38
CSDE1-217ENST00000534699 C9orf116Q5BN46 136 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-217ENST00000534699 ERASQ7Z444 233 aa6.44□□□□□ -1.38
CSDE1-217ENST00000534699 NDUFC2-KCTD14E9PQ53 114 aa6.44□□□□□ -1.38
CSDE1-217ENST00000534699 PRSS2P07478 247 aa6.44□□□□□ -1.38
CSDE1-217ENST00000534699 NUPR1O60356 82 aa6.43□□□□□ -1.38
CSDE1-217ENST00000534699 KRTAP10-8P60410 259 aa6.43□□□□□ -1.38
CSDE1-217ENST00000534699 RPL18AQ02543 176 aaKnown RBP6.43□□□□□ -1.38
CSDE1-217ENST00000534699 RNASE13Q5GAN3 156 aaKnown RBP6.43□□□□□ -1.38
CSDE1-217ENST00000534699 TP73-AS1Q9UF72 201 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms