RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532		Q6ZTC4	211 aa		11.43	□□□□□ -0.58
NCAPD3-213	ENST00000534532	WFDC2	Q14508	124 aa		11.43	□□□□□ -0.58
NCAPD3-213	ENST00000534532	POLR2K	P53803	58 aa	Known RBP	11.43	□□□□□ -0.58
NCAPD3-213	ENST00000534532	PLAC8L1	A1L4L8	177 aa		11.43	□□□□□ -0.58
NCAPD3-213	ENST00000534532	C5orf47	Q569G3	176 aa		11.43	□□□□□ -0.58
NCAPD3-213	ENST00000534532	FN1	P02751	2386 aa	Known RBP	11.42	□□□□□ -0.58
NCAPD3-213	ENST00000534532	EDN2	P20800	178 aa		11.41	□□□□□ -0.58
NCAPD3-213	ENST00000534532	NRAC	Q8N912	160 aa		11.41	□□□□□ -0.58
NCAPD3-213	ENST00000534532	COX17	Q14061	63 aa		11.41	□□□□□ -0.58
NCAPD3-213	ENST00000534532	IGLV5-52	A0A0A0MRZ9	124 aa		11.4	□□□□□ -0.58
NCAPD3-213	ENST00000534532	TIMM17B	O60830	172 aa		11.4	□□□□□ -0.58
NCAPD3-213	ENST00000534532	PTPRS	Q13332	1948 aa		11.4	□□□□□ -0.58
NCAPD3-213	ENST00000534532	FASN	P49327	2511 aa	Known RBP	11.4	□□□□□ -0.58
NCAPD3-213	ENST00000534532		Q8IZM0	81 aa		11.4	□□□□□ -0.58
NCAPD3-213	ENST00000534532	SPINK6	Q6UWN8	80 aa		11.4	□□□□□ -0.59
NCAPD3-213	ENST00000534532	CDC42SE2	Q9NRR3	84 aa		11.4	□□□□□ -0.59
NCAPD3-213	ENST00000534532	FOXI1	Q12951	378 aa		11.39	□□□□□ -0.59
NCAPD3-213	ENST00000534532	TAX1BP3	O14907	124 aa		11.39	□□□□□ -0.59
NCAPD3-213	ENST00000534532	FSHB	P01225	129 aa		11.39	□□□□□ -0.59
NCAPD3-213	ENST00000534532	C1orf134	Q5TEV5	83 aa		11.39	□□□□□ -0.59
NCAPD3-213	ENST00000534532	FAM236A	A0A1B0GUQ0	79 aa		11.39	□□□□□ -0.59
NCAPD3-213	ENST00000534532	FAM236B	A0A1B0GV22	79 aa		11.39	□□□□□ -0.59
NCAPD3-213	ENST00000534532	C1orf158	Q8N1D5	194 aa		11.38	□□□□□ -0.59
NCAPD3-213	ENST00000534532	RPL37AP8	A6NKH3	93 aa		11.38	□□□□□ -0.59
NCAPD3-213	ENST00000534532	CYSRT1	A8MQ03	144 aa		11.38	□□□□□ -0.59
NCAPD3-213	ENST00000534532	TCL1B	O95988	128 aa		11.38	□□□□□ -0.59
NCAPD3-213	ENST00000534532	RPL28	P46779	137 aa	Known RBP	11.38	□□□□□ -0.59
NCAPD3-213	ENST00000534532	SLPI	P03973	132 aa		11.37	□□□□□ -0.59
NCAPD3-213	ENST00000534532	CCK	P06307	115 aa		11.37	□□□□□ -0.59
NCAPD3-213	ENST00000534532	TANC2	Q9HCD6	1990 aa		11.37	□□□□□ -0.59
NCAPD3-213	ENST00000534532	EGFEM1P	Q0D2K5	195 aa		11.36	□□□□□ -0.59
NCAPD3-213	ENST00000534532	LINC00643	Q86TS7	51 aa		11.36	□□□□□ -0.59
NCAPD3-213	ENST00000534532		A8MZ25	164 aa		11.36	□□□□□ -0.59
NCAPD3-213	ENST00000534532	USP17L23	D6RBM5	183 aa		11.36	□□□□□ -0.59
NCAPD3-213	ENST00000534532	SPTBN4	Q9H254	2564 aa		11.35	□□□□□ -0.59
NCAPD3-213	ENST00000534532	TRBV30	A0A0K0K1B3	111 aa		11.35	□□□□□ -0.59
NCAPD3-213	ENST00000534532		Q6ZQY7	126 aa		11.34	□□□□□ -0.59
NCAPD3-213	ENST00000534532	MRPS12	O15235	138 aa	Known RBP	11.34	□□□□□ -0.59
NCAPD3-213	ENST00000534532	CNFN	Q9BYD5	112 aa		11.34	□□□□□ -0.59
NCAPD3-213	ENST00000534532	USP9Y	O00507	2555 aa	Predicted RBP	11.34	□□□□□ -0.59
NCAPD3-213	ENST00000534532	IGLV9-49	A0A0B4J1Y8	123 aa		11.34	□□□□□ -0.59
NCAPD3-213	ENST00000534532		M0QXV9	152 aa		11.34	□□□□□ -0.59
NCAPD3-213	ENST00000534532	ZNF73	O43830	326 aa	Predicted RBP	11.34	□□□□□ -0.59
NCAPD3-213	ENST00000534532	FHL2	Q14192	279 aa		11.34	□□□□□ -0.59
NCAPD3-213	ENST00000534532	HRCT1	Q6UXD1	115 aa		11.33	□□□□□ -0.6
NCAPD3-213	ENST00000534532	PTH2	Q96A98	100 aa		11.33	□□□□□ -0.6
NCAPD3-213	ENST00000534532	RNASE8	Q8TDE3	154 aa	Known RBP	11.32	□□□□□ -0.6
NCAPD3-213	ENST00000534532	MAPKAPK5-AS1	Q8N8E1	139 aa		11.31	□□□□□ -0.6
NCAPD3-213	ENST00000534532	HCFC1	P51610	2035 aa		11.31	□□□□□ -0.6
NCAPD3-213	ENST00000534532		G3V4G9	280 aa		11.31	□□□□□ -0.6
NCAPD3-213	ENST00000534532	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.3	□□□□□ -0.6
NCAPD3-213	ENST00000534532	TRIAP1	O43715	76 aa		11.3	□□□□□ -0.6
NCAPD3-213	ENST00000534532	ATP5EP2	Q5VTU8	51 aa		11.3	□□□□□ -0.6
NCAPD3-213	ENST00000534532	C6orf223	Q8N319	242 aa		11.3	□□□□□ -0.6
NCAPD3-213	ENST00000534532	FHL3	Q13643	280 aa		11.29	□□□□□ -0.6
NCAPD3-213	ENST00000534532	WFDC10B	Q8IUB3	73 aa		11.29	□□□□□ -0.6
NCAPD3-213	ENST00000534532		Q8N2B8	174 aa		11.28	□□□□□ -0.6
NCAPD3-213	ENST00000534532	C3orf84	H3BNL1	204 aa		11.28	□□□□□ -0.6
NCAPD3-213	ENST00000534532	LINC00242	Q5T6M2	205 aa		11.28	□□□□□ -0.6
NCAPD3-213	ENST00000534532	SCX	Q7RTU7	201 aa		11.28	□□□□□ -0.6
NCAPD3-213	ENST00000534532	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.28	□□□□□ -0.6
NCAPD3-213	ENST00000534532	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	11.27	□□□□□ -0.6
NCAPD3-213	ENST00000534532	TP73-AS1	Q9UF72	201 aa		11.27	□□□□□ -0.6
NCAPD3-213	ENST00000534532	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.27	□□□□□ -0.6
NCAPD3-213	ENST00000534532	ADAMTS20	P59510	1910 aa		11.27	□□□□□ -0.61
NCAPD3-213	ENST00000534532		F8WDY8	70 aa		11.27	□□□□□ -0.61
NCAPD3-213	ENST00000534532	C10orf25	Q5T742	122 aa		11.26	□□□□□ -0.61
NCAPD3-213	ENST00000534532	LYPD5	Q6UWN5	251 aa		11.26	□□□□□ -0.61
NCAPD3-213	ENST00000534532	BEAN1	Q3B7T3	259 aa		11.26	□□□□□ -0.61
NCAPD3-213	ENST00000534532		B5MCH6	92 aa		11.25	□□□□□ -0.61
NCAPD3-213	ENST00000534532	GAS8-AS1	O95177	125 aa		11.24	□□□□□ -0.61
NCAPD3-213	ENST00000534532	SMIM11B	Q8TCY0	68 aa		11.24	□□□□□ -0.61
NCAPD3-213	ENST00000534532	IGIP	A6NJ69	53 aa		11.24	□□□□□ -0.61
NCAPD3-213	ENST00000534532	IGLV4-60	A0A075B6I1	120 aa		11.24	□□□□□ -0.61
NCAPD3-213	ENST00000534532	TEX49	A0A1B0GTD5	131 aa		11.24	□□□□□ -0.61
NCAPD3-213	ENST00000534532	REG3G	Q6UW15	175 aa		11.24	□□□□□ -0.61
NCAPD3-213	ENST00000534532	CSDC2	Q9Y534	153 aa	Known RBP	11.22	□□□□□ -0.61
NCAPD3-213	ENST00000534532	POM121L12	Q8N7R1	296 aa		11.22	□□□□□ -0.61
NCAPD3-213	ENST00000534532		A0A1B0GUV1	79 aa		11.21	□□□□□ -0.61
NCAPD3-213	ENST00000534532	LINC01556	Q5JQF7	62 aa		11.21	□□□□□ -0.61
NCAPD3-213	ENST00000534532	C1orf137	Q5JT78	98 aa		11.21	□□□□□ -0.61
NCAPD3-213	ENST00000534532	ENHO	Q6UWT2	76 aa		11.21	□□□□□ -0.61
NCAPD3-213	ENST00000534532	C2orf48	Q96LS8	159 aa		11.21	□□□□□ -0.62
NCAPD3-213	ENST00000534532	SMIM1	B2RUZ4	78 aa		11.2	□□□□□ -0.62
NCAPD3-213	ENST00000534532	COX6A2	Q02221	97 aa		11.2	□□□□□ -0.62
NCAPD3-213	ENST00000534532	KRTAP24-1	Q3LI83	254 aa		11.2	□□□□□ -0.62
NCAPD3-213	ENST00000534532	SDIM1	Q6ZPB5	146 aa		11.2	□□□□□ -0.62
NCAPD3-213	ENST00000534532	CIRBP-AS1	Q8TBR5	109 aa		11.2	□□□□□ -0.62
NCAPD3-213	ENST00000534532	NDUFC2-KCTD14	E9PQ53	114 aa		11.19	□□□□□ -0.62
NCAPD3-213	ENST00000534532	WFDC13	Q8IUB5	93 aa		11.19	□□□□□ -0.62
NCAPD3-213	ENST00000534532	LINC00694	P0DN24	101 aa		11.19	□□□□□ -0.62
NCAPD3-213	ENST00000534532	NDUFV3	P56181	108 aa	Known RBP	11.19	□□□□□ -0.62
NCAPD3-213	ENST00000534532	C9orf116	Q5BN46	136 aa	Predicted RBP	11.19	□□□□□ -0.62
NCAPD3-213	ENST00000534532	WDR87	Q6ZQQ6	2873 aa		11.19	□□□□□ -0.62
NCAPD3-213	ENST00000534532	COX8C	Q7Z4L0	72 aa		11.18	□□□□□ -0.62
NCAPD3-213	ENST00000534532	TRBV10-3	A0A0K0K1G6	114 aa		11.17	□□□□□ -0.62
NCAPD3-213	ENST00000534532	MTOR	P42345	2549 aa		11.17	□□□□□ -0.62
NCAPD3-213	ENST00000534532	MDFI	Q99750	246 aa		11.17	□□□□□ -0.62
NCAPD3-213	ENST00000534532	EXPH5	Q8NEV8	1989 aa		11.17	□□□□□ -0.62
NCAPD3-213	ENST00000534532	LST1	O00453	97 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms