RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 OPRPNQ99935 248 aaPredicted RBP5.55□□□□□ -1.52
COPB1-211ENST00000534234 SMIM2Q9BVW6 85 aa5.55□□□□□ -1.52
COPB1-211ENST00000534234 A0A1B0GXF2 115 aa5.54□□□□□ -1.52
COPB1-211ENST00000534234 NPYP01303 97 aa5.54□□□□□ -1.52
COPB1-211ENST00000534234 PPBPP02775 128 aa5.54□□□□□ -1.52
COPB1-211ENST00000534234 SPINK6Q6UWN8 80 aa5.54□□□□□ -1.52
COPB1-211ENST00000534234 FAM104AQ969W3 186 aa5.54□□□□□ -1.52
COPB1-211ENST00000534234 SPANXA1Q9NS26 97 aa5.54□□□□□ -1.52
COPB1-211ENST00000534234 HMCN2Q8NDA2 5059 aa5.53□□□□□ -1.52
COPB1-211ENST00000534234 A0A1W2PNN7 141 aa5.53□□□□□ -1.52
COPB1-211ENST00000534234 SRSF9Q13242 221 aaKnown RBP eCLIP5.53□□□□□ -1.522e-11■■■■□ 22.3
COPB1-211ENST00000534234 TMEM136Q6ZRR5 245 aa5.53□□□□□ -1.52
COPB1-211ENST00000534234 IGHV3OR16-9A0A0B4J2B5 98 aa5.52□□□□□ -1.53
COPB1-211ENST00000534234 A0A0J9YXV3 536 aa5.52□□□□□ -1.53
COPB1-211ENST00000534234 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.52□□□□□ -1.53
COPB1-211ENST00000534234 RAB5AP20339 215 aa5.52□□□□□ -1.53
COPB1-211ENST00000534234 MRPS36P82909 103 aaKnown RBP5.52□□□□□ -1.53
COPB1-211ENST00000534234 RPL18AQ02543 176 aaKnown RBP5.52□□□□□ -1.53
COPB1-211ENST00000534234 SPAG11BQ08648 103 aa5.52□□□□□ -1.53
COPB1-211ENST00000534234 RNF151Q2KHN1 245 aa5.52□□□□□ -1.53
COPB1-211ENST00000534234 C9orf116Q5BN46 136 aaPredicted RBP5.52□□□□□ -1.53
COPB1-211ENST00000534234 REG3GQ6UW15 175 aa5.52□□□□□ -1.53
COPB1-211ENST00000534234 ORMDL3Q8N138 153 aa5.52□□□□□ -1.53
COPB1-211ENST00000534234 OR10D4PQ8NGN7 298 aa5.52□□□□□ -1.53
COPB1-211ENST00000534234 IFITM10A6NMD0 228 aa5.51□□□□□ -1.53
COPB1-211ENST00000534234 ATP5L2Q7Z4Y8 100 aa5.51□□□□□ -1.53
COPB1-211ENST00000534234 ORAOV1Q8WV07 137 aa5.51□□□□□ -1.53
COPB1-211ENST00000534234 PRELID3AQ96N28 172 aa5.51□□□□□ -1.53
COPB1-211ENST00000534234 F8WDY8 70 aa5.5□□□□□ -1.53
COPB1-211ENST00000534234 IFI27P40305 119 aaPredicted RBP5.5□□□□□ -1.53
COPB1-211ENST00000534234 KRTAP10-8P60410 259 aa5.5□□□□□ -1.53
COPB1-211ENST00000534234 IMMP2LQ96T52 175 aa5.5□□□□□ -1.53
COPB1-211ENST00000534234 MRPL35Q9NZE8 188 aaKnown RBP5.5□□□□□ -1.53
COPB1-211ENST00000534234 PKHD1L1Q86WI1 4243 aa5.5□□□□□ -1.53
COPB1-211ENST00000534234 LOC389332A0A1B0GUA5 103 aa5.5□□□□□ -1.53
COPB1-211ENST00000534234 NDUFA1O15239 70 aa5.5□□□□□ -1.53
COPB1-211ENST00000534234 C10orf25Q5T742 122 aa5.5□□□□□ -1.53
COPB1-211ENST00000534234 PYGO1Q9Y3Y4 419 aa5.5□□□□□ -1.53
COPB1-211ENST00000534234 TGIF2-C20orf24A0A0A6YYL0 155 aa5.49□□□□□ -1.53
COPB1-211ENST00000534234 PRSS47A8MTI9 375 aa5.49□□□□□ -1.53
COPB1-211ENST00000534234 MT-ND6P03923 174 aa5.49□□□□□ -1.53
COPB1-211ENST00000534234 ODF1Q14990 250 aa5.49□□□□□ -1.53
COPB1-211ENST00000534234 UNQ6190/PRO20217Q6UXQ8 127 aa5.49□□□□□ -1.53
COPB1-211ENST00000534234 PHF5AQ7RTV0 110 aaKnown RBP5.49□□□□□ -1.53
COPB1-211ENST00000534234 PSORS1C2Q9UIG4 136 aa5.49□□□□□ -1.53
COPB1-211ENST00000534234 IGLV4-3A0A075B6K6 122 aa5.48□□□□□ -1.53
COPB1-211ENST00000534234 A0A087WZ39 114 aa5.48□□□□□ -1.53
COPB1-211ENST00000534234 MT-ND4LP03901 98 aa5.48□□□□□ -1.53
COPB1-211ENST00000534234 PNRC1Q12796 327 aaPredicted RBP5.48□□□□□ -1.53
COPB1-211ENST00000534234 LINC00242Q5T6M2 205 aa5.48□□□□□ -1.53
COPB1-211ENST00000534234 ANAPC16Q96DE5 110 aa5.48□□□□□ -1.53
COPB1-211ENST00000534234 MAP1LC3AQ9H492 121 aa5.48□□□□□ -1.53
COPB1-211ENST00000534234 LAMTOR2Q9Y2Q5 125 aa5.48□□□□□ -1.53
COPB1-211ENST00000534234 UBR4Q5T4S7 5183 aa5.47□□□□□ -1.53
COPB1-211ENST00000534234 KIAA0087Q14695 138 aa5.47□□□□□ -1.53
COPB1-211ENST00000534234 C1orf137Q5JT78 98 aa5.47□□□□□ -1.53
COPB1-211ENST00000534234 TMEM141Q96I45 108 aa5.47□□□□□ -1.53
COPB1-211ENST00000534234 C6orf48Q9UBA6 75 aa5.47□□□□□ -1.53
COPB1-211ENST00000534234 TLX1NBP0CAT3 122 aa5.46□□□□□ -1.53
COPB1-211ENST00000534234 RAB14P61106 215 aa5.46□□□□□ -1.53
COPB1-211ENST00000534234 GAGE2EQ4V326 116 aa5.46□□□□□ -1.53
COPB1-211ENST00000534234 TEX43Q6ZNM6 134 aa5.46□□□□□ -1.53
COPB1-211ENST00000534234 Q8N8P6 123 aa5.46□□□□□ -1.53
COPB1-211ENST00000534234 GAGE2DQ9UEU5 116 aa5.46□□□□□ -1.53
COPB1-211ENST00000534234 CYSLTR1Q9Y271 337 aa5.46□□□□□ -1.53
COPB1-211ENST00000534234 FAM168BA1KXE4 195 aa5.46□□□□□ -1.54
COPB1-211ENST00000534234 UBE2D1P51668 147 aa5.46□□□□□ -1.54
COPB1-211ENST00000534234 ZC2HC1BQ5TFG8 222 aa5.46□□□□□ -1.54
COPB1-211ENST00000534234 C2orf82Q6UX34 121 aa5.46□□□□□ -1.54
COPB1-211ENST00000534234 C2orf66Q6UXQ4 117 aa5.46□□□□□ -1.54
COPB1-211ENST00000534234 VCX2Q9H322 139 aa5.46□□□□□ -1.54
COPB1-211ENST00000534234 ORMDL2Q53FV1 153 aa5.45□□□□□ -1.54
COPB1-211ENST00000534234 Q6ZN92 141 aa5.45□□□□□ -1.54
COPB1-211ENST00000534234 FAM19A5Q7Z5A7 132 aaPredicted RBP5.45□□□□□ -1.54
COPB1-211ENST00000534234 C2orf88Q9BSF0 95 aa5.45□□□□□ -1.54
COPB1-211ENST00000534234 TRBV30A0A0K0K1B3 111 aa5.44□□□□□ -1.54
COPB1-211ENST00000534234 K7EMI3 77 aa5.44□□□□□ -1.54
COPB1-211ENST00000534234 IGLV7-43P04211 117 aa5.44□□□□□ -1.54
COPB1-211ENST00000534234 LINC00173Q6ZV60 143 aa5.44□□□□□ -1.54
COPB1-211ENST00000534234 LINC01561Q8N1V8 128 aa5.44□□□□□ -1.54
COPB1-211ENST00000534234 PACRGQ96M98 296 aaPredicted RBP5.44□□□□□ -1.54
COPB1-211ENST00000534234 AMELXQ99217 191 aa5.44□□□□□ -1.54
COPB1-211ENST00000534234 CTDSP1Q9GZU7 261 aa5.44□□□□□ -1.54
COPB1-211ENST00000534234 IGIPA6NJ69 53 aa5.43□□□□□ -1.54
COPB1-211ENST00000534234 NDUFC2-KCTD14E9PQ53 114 aa5.43□□□□□ -1.54
COPB1-211ENST00000534234 KRTAP11-1Q8IUC1 163 aa5.43□□□□□ -1.54
COPB1-211ENST00000534234 KRTAP7-1Q8IUC3 87 aa5.43□□□□□ -1.54
COPB1-211ENST00000534234 DIRC1Q969H9 104 aa5.43□□□□□ -1.54
COPB1-211ENST00000534234 NXT2Q9NPJ8 142 aaKnown RBP5.43□□□□□ -1.54
COPB1-211ENST00000534234 PRSS2P07478 247 aa5.42□□□□□ -1.54
COPB1-211ENST00000534234 NPSP0C0P6 89 aa5.42□□□□□ -1.54
COPB1-211ENST00000534234 G0S2P27469 103 aa5.42□□□□□ -1.54
COPB1-211ENST00000534234 C6orf226Q5I0X4 101 aa5.42□□□□□ -1.54
COPB1-211ENST00000534234 TOMM7Q9P0U1 55 aa5.42□□□□□ -1.54
COPB1-211ENST00000534234 M0QXV9 152 aa5.42□□□□□ -1.54
COPB1-211ENST00000534234 CKS1BP61024 79 aa5.42□□□□□ -1.54
COPB1-211ENST00000534234 UBE2BP63146 152 aa5.42□□□□□ -1.54
COPB1-211ENST00000534234 CLLU1Q5K131 121 aa5.42□□□□□ -1.54
COPB1-211ENST00000534234 PAPPA-AS1Q5QFB9 102 aa5.42□□□□□ -1.54
COPB1-211ENST00000534234 C9orf129Q5T035 196 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms