RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 C2orf83Q53S99 150 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 LINC01556Q5JQF7 62 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 FAM162BQ5T6X4 162 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 SLC25A34Q6PIV7 304 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 LINC00173Q6ZV60 143 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 GOLT1AQ6ZVE7 132 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 SMIM15Q7Z3B0 74 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 Q86TA4 180 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 MRPL52Q86TS9 123 aaKnown RBP1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 NIT1Q86X76 327 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 EXOC3-AS1Q8N2X6 119 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 Q8N976 141 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 NUP35Q8NFH5 326 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 C18orf32Q8TCD1 76 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 C11orf52Q96A22 123 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 DPH3Q96FX2 82 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 HSPB8Q9UJY1 196 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 ZFP30Q9Y2G7 519 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 FCGBPQ9Y6R7 5405 aaPredicted RBP1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 IGKV2D-24A0A075B6R9 120 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 TRAV8-1A0A0A6YYK1 113 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 IGHV3-73A0A0B4J1V6 119 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 IGHV1-24A0A0C4DH33 117 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 A0A0U1RQV1 116 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 A0A1W2PRE2 83 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 SMIM27A0A1W2PRY6 76 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 A6NDN8 102 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 FBLL1A6NHQ2 334 aaKnown RBP1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 A8MWL6 223 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 SMKR1H3BMG3 65 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 SCGB2A1O75556 95 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 NCR2O95944 276 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 IGLC2P0DOY2 106 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 IGLC3P0DOY3 106 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 FCER1GP30273 86 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 CSN1S1P47710 185 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 DSCR10P59022 87 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 CACNG7P62955 275 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 KRTAP13-3Q3SY46 172 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 MPV17L2Q567V2 206 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 TMEM97Q5BJF2 176 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 AMMECR1LQ6DCA0 310 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 SDIM1Q6ZPB5 146 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 Q6ZVQ6 151 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 ORAOV1Q8WV07 137 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 FXYD5Q96DB9 178 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 ZC2HC1AQ96GY0 325 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 FMC1Q96HJ9 113 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 C2orf48Q96LS8 159 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 Q9UF83 564 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 EPDR1Q9UM22 224 aa1.84□□□□□ -2.11
CHMP4A-208ENST00000534106 IGKV2-40A0A087WW87 121 aaPredicted RBP1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 TRAV8-6A0A0B4J262 113 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 C7orf71A4D174 169 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 D6R8Y8 96 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 SYS1-DBNDD2H3BUS1 97 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 H3BUT2 72 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 CCL25O15444 150 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 IGKV2D-40P01614 121 aaPredicted RBP1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 MGPP08493 103 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 NBEAP1P0C6P0 100 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 ARMS2P0C7Q2 107 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 ESDP10768 282 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 PRR4Q16378 134 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 BVES-AS1Q5T3Y7 98 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 ADAMTSL4-AS1Q5T5F5 129 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 PRR9Q5T870 116 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 PATE2Q6UY27 113 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 GTF2H5Q6ZYL4 71 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 ATP5L2Q7Z4Y8 100 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 C5orf17Q8NAS9 161 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 Q8TAT8 98 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 GTSF1Q8WW33 167 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 CHCHD1Q96BP2 118 aaKnown RBP1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 PRAC1Q96KF2 57 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 PRELID3AQ96N28 172 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 TRGV9Q99603 122 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 VGLL1Q99990 258 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 NDFIP1Q9BT67 221 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 MAP1LC3AQ9H492 121 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 ST20Q9HBF5 79 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 OTORQ9NRC9 128 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 ZNF492Q9P255 531 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 PSG8Q9UQ74 426 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 KIF25-AS1Q9Y6Z4 181 aa1.83□□□□□ -2.12
CHMP4A-208ENST00000534106 IGLV7-46A0A075B6I9 117 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 IGHV1OR15-1A0A075B7D0 117 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 TRAV8-3A0A0A6YYJ7 113 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 A0A1B0GUT8 65 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 FNDC10F2Z333 226 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 H3BRN7 92 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 K7ERJ3 54 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 TAX1BP3O14907 124 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 MRPS12O15235 138 aaKnown RBP1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 GNRH2O43555 120 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 SH2D1AO60880 128 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 LTAP01374 205 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 HBDP02042 147 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 ORM1P02763 201 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 TCRAP04437 139 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms