RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 LYZL1Q6UWQ5 148 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 LINC00322Q6ZN03 302 aaPredicted RBP2.95□□□□□ -1.94
ITGB1-219ENST00000534049 CSNK1G2-AS1Q8NCQ2 148 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 OBSCN-AS1Q96MR7 158 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 FER1L5A0AVI2 2057 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 NCOA6Q14686 2063 aaPredicted RBP2.95□□□□□ -1.94
ITGB1-219ENST00000534049 SCN3AQ9NY46 2000 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 PRRC2CQ9Y520 2896 aaKnown RBP2.94□□□□□ -1.94
ITGB1-219ENST00000534049 CRYBG3Q68DQ2 2970 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 SHANK1Q9Y566 2161 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 CELSR2Q9HCU4 2923 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 ICE1Q9Y2F5 2266 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 IGKV1D-17A0A075B6S4 117 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 IGKV1-27A0A075B6S5 117 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 A0A087WZ39 114 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 IGHV3OR16-9A0A0B4J2B5 98 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 IGIPA6NJ69 53 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 C17orf98A8MV24 154 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 JMJD7-PLA2G4BH0Y9G9 81 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 H7C2G1 150 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 SAA1P0DJI8 122 aaPredicted RBP2.94□□□□□ -1.94
ITGB1-219ENST00000534049 C10orf128Q5T292 105 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 FLVCR1-AS1Q8TAF5 88 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 RNF185Q96GF1 192 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 LIMD2Q9BT23 127 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 UBL5Q9BZL1 73 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 DOCK11Q5JSL3 2073 aa2.94□□□□□ -1.94
ITGB1-219ENST00000534049 GTF3C1Q12789 2109 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 ZFHX3Q15911 3703 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 POLEQ07864 2286 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 ZNF469Q96JG9 3925 aaPredicted RBP2.93□□□□□ -1.94
ITGB1-219ENST00000534049 IGKV3D-7A0A0C4DH55 119 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 C4orf51C9J302 202 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 E7EUB6 86 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 H0Y9J4 135 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 H0YGX0 51 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 IGLV3-21P80748 117 aaPredicted RBP2.93□□□□□ -1.94
ITGB1-219ENST00000534049 DEFB110Q30KQ9 67 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 TMEM61Q8N0U2 210 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 LINC00269Q8N2A0 174 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 Q8N6K4 173 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 FDCSPQ8NFU4 85 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 SMIM2Q9BVW6 85 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 TMEM14BQ9NUH8 114 aa2.93□□□□□ -1.94
ITGB1-219ENST00000534049 TEP1Q99973 2627 aaKnown RBP2.93□□□□□ -1.94
ITGB1-219ENST00000534049 MTORP42345 2549 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 PHF3Q92576 2039 aaKnown RBP2.92□□□□□ -1.94
ITGB1-219ENST00000534049 APCP25054 2843 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 IGHV1-45A0A0A0MS14 117 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 IGKV1-8A0A0C4DH67 115 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 hDV103S1A0JD37 113 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 A6NN06 94 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 C19orf84I3L1E1 186 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 CCL24O00175 119 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 IGHV3-9P01782 118 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 RNASE4P34096 147 aaKnown RBP2.92□□□□□ -1.94
ITGB1-219ENST00000534049 RPL28P46779 137 aaKnown RBP2.92□□□□□ -1.94
ITGB1-219ENST00000534049 FXYD7P58549 80 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 ERHP84090 104 aaKnown RBP2.92□□□□□ -1.94
ITGB1-219ENST00000534049 PRCDQ00LT1 54 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 MIAQ16674 131 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 LINC01554Q52M75 96 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 FAM27BQ5VT28 67 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 PRNTQ86SH4 94 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 KLHL30-AS1Q8NEE0 82 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 TYMSOSQ8TAI1 123 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 LINC01560Q8TB33 94 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 CLEC2BQ92478 149 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 AMELXQ99217 191 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 LINC00846Q9NV44 126 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 POLQO75417 2590 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 DCHS2Q6V1P9 2916 aa2.92□□□□□ -1.94
ITGB1-219ENST00000534049 RAI1Q7Z5J4 1906 aaPredicted RBP2.91□□□□□ -1.94
ITGB1-219ENST00000534049 PDZD2O15018 2839 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 NF1P21359 2839 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 CCDC168Q8NDH2 2452 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 TRAV23DV6A0A075B6W5 121 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 A0A087WVE0 104 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 IGKV1D-43A0A0B4J1Z2 117 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 TRBV7-4A0A0J9YYF1 115 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 A0A1B0GW54 56 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 BUB1B-PAK6H3BSN5 160 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 M0R1W7 72 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 FSTL3O95633 263 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 TRBV12-3P01733 135 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 IGHV1-69P01742 117 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 SYCNQ0VAF6 134 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 C2orf66Q6UXQ4 117 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 SOSTDC1Q6X4U4 206 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 ZNF833PQ6ZTB9 187 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 GPHB5Q86YW7 130 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 KLF14Q8TD94 323 aaPredicted RBP2.91□□□□□ -1.94
ITGB1-219ENST00000534049 RMI2Q96E14 147 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 BPESC1Q9GZL8 116 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 F8P00451 2351 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 NAV3Q8IVL0 2385 aa2.91□□□□□ -1.94
ITGB1-219ENST00000534049 MED13Q9UHV7 2174 aa2.9□□□□□ -1.94
ITGB1-219ENST00000534049 IGLV4-69A0A075B6H9 119 aa2.9□□□□□ -1.95
ITGB1-219ENST00000534049 H3BQ85 93 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms