RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 FAM218AQ96MZ4 157 aa11.77□□□□□ -0.52
CTSB-228ENST00000533455 LINC00643Q86TS7 51 aa11.76□□□□□ -0.53
CTSB-228ENST00000533455 ZANQ9Y493 2812 aa11.76□□□□□ -0.53
CTSB-228ENST00000533455 SMCR5Q8TEV8 140 aa11.76□□□□□ -0.53
CTSB-228ENST00000533455 COX7B2Q8TF08 81 aa11.76□□□□□ -0.53
CTSB-228ENST00000533455 NOP10Q9NPE3 64 aaKnown RBP11.75□□□□□ -0.53
CTSB-228ENST00000533455 MXRA5Q9NR99 2828 aa11.75□□□□□ -0.53
CTSB-228ENST00000533455 CRPP02741 224 aa11.74□□□□□ -0.53
CTSB-228ENST00000533455 POLQO75417 2590 aa11.74□□□□□ -0.53
CTSB-228ENST00000533455 PLAC8L1A1L4L8 177 aa11.74□□□□□ -0.53
CTSB-228ENST00000533455 LRRC75A-AS1Q8N1F1 130 aa11.74□□□□□ -0.53
CTSB-228ENST00000533455 C16orf74Q96GX8 76 aa11.74□□□□□ -0.53
CTSB-228ENST00000533455 TRBV6-4A0A1B0GX49 114 aa11.73□□□□□ -0.53
CTSB-228ENST00000533455 INAFM2P0DMQ5 153 aa11.73□□□□□ -0.53
CTSB-228ENST00000533455 OVOL2Q9BRP0 275 aa11.73□□□□□ -0.53
CTSB-228ENST00000533455 GIG44P09565 113 aaPredicted RBP11.72□□□□□ -0.53
CTSB-228ENST00000533455 DEFB113Q30KQ7 82 aa11.72□□□□□ -0.53
CTSB-228ENST00000533455 MIR7-3HGQ8N6C7 128 aa11.72□□□□□ -0.53
CTSB-228ENST00000533455 LINC00337Q8N6G1 96 aa11.72□□□□□ -0.53
CTSB-228ENST00000533455 CHCHD5Q9BSY4 110 aa11.72□□□□□ -0.53
CTSB-228ENST00000533455 IGKV2-28A0A075B6P5 120 aa11.72□□□□□ -0.53
CTSB-228ENST00000533455 CCL24O00175 119 aa11.72□□□□□ -0.53
CTSB-228ENST00000533455 IGKV2D-28P01615 120 aa11.72□□□□□ -0.53
CTSB-228ENST00000533455 CMC4P56277 68 aaPredicted RBP11.72□□□□□ -0.53
CTSB-228ENST00000533455 SND1-IT1Q9HBX3 110 aa11.71□□□□□ -0.53
CTSB-228ENST00000533455 NBPF19A0A087WUL8 3843 aa11.71□□□□□ -0.54
CTSB-228ENST00000533455 LOC100131303A0A0U1RQF7 123 aa11.7□□□□□ -0.54
CTSB-228ENST00000533455 MALP21145 153 aa11.7□□□□□ -0.54
CTSB-228ENST00000533455 KRTAP10-9P60411 292 aa11.7□□□□□ -0.54
CTSB-228ENST00000533455 TENM4Q6N022 2769 aa11.7□□□□□ -0.54
CTSB-228ENST00000533455 FAM236AA0A1B0GUQ0 79 aa11.7□□□□□ -0.54
CTSB-228ENST00000533455 FAM236BA0A1B0GV22 79 aa11.7□□□□□ -0.54
CTSB-228ENST00000533455 AKAP9Q99996 3911 aa11.69□□□□□ -0.54
CTSB-228ENST00000533455 TRGV2A0A075B6R0 118 aa11.69□□□□□ -0.54
CTSB-228ENST00000533455 CXCL5P42830 114 aa11.69□□□□□ -0.54
CTSB-228ENST00000533455 IGHV3OR16-9A0A0B4J2B5 98 aa11.68□□□□□ -0.54
CTSB-228ENST00000533455 A0A1W2PRX2 142 aa11.68□□□□□ -0.54
CTSB-228ENST00000533455 ABCA12Q86UK0 2595 aa11.68□□□□□ -0.54
CTSB-228ENST00000533455 DNAJC9-AS1A6NH13 148 aa11.67□□□□□ -0.54
CTSB-228ENST00000533455 IBA57-AS1B1ANH7 110 aa11.67□□□□□ -0.54
CTSB-228ENST00000533455 FAM110AQ9BQ89 295 aa11.67□□□□□ -0.54
CTSB-228ENST00000533455 Q9HAA7 133 aa11.67□□□□□ -0.54
CTSB-228ENST00000533455 PTPN13Q12923 2485 aa11.67□□□□□ -0.54
CTSB-228ENST00000533455 CCL18P55774 89 aa11.67□□□□□ -0.54
CTSB-228ENST00000533455 SMIM11BQ8TCY0 68 aa11.67□□□□□ -0.54
CTSB-228ENST00000533455 TOMM7Q9P0U1 55 aa11.67□□□□□ -0.54
CTSB-228ENST00000533455 KMT2BQ9UMN6 2715 aaPredicted RBP11.66□□□□□ -0.54
CTSB-228ENST00000533455 IGLV4-60A0A075B6I1 120 aa11.66□□□□□ -0.54
CTSB-228ENST00000533455 TRBV6-8A0A0A6YYG3 113 aa11.66□□□□□ -0.54
CTSB-228ENST00000533455 H0YGX0 51 aa11.66□□□□□ -0.54
CTSB-228ENST00000533455 ATP5G1P05496 136 aa11.66□□□□□ -0.54
CTSB-228ENST00000533455 LINC00158P58513 81 aa11.66□□□□□ -0.54
CTSB-228ENST00000533455 C5orf38Q86SI9 138 aa11.66□□□□□ -0.54
CTSB-228ENST00000533455 A0A087WZ39 114 aa11.65□□□□□ -0.54
CTSB-228ENST00000533455 TRGV4A0A0C4DH28 118 aa11.65□□□□□ -0.54
CTSB-228ENST00000533455 KRTAP1-3Q8IUG1 177 aa11.65□□□□□ -0.54
CTSB-228ENST00000533455 C11orf44Q8N8P7 122 aa11.65□□□□□ -0.54
CTSB-228ENST00000533455 MYO9AB2RTY4 2548 aa11.65□□□□□ -0.54
CTSB-228ENST00000533455 CSNK1G2-AS1Q8NCQ2 148 aa11.65□□□□□ -0.54
CTSB-228ENST00000533455 A0A087WYN8 130 aa11.64□□□□□ -0.55
CTSB-228ENST00000533455 FHL2Q14192 279 aa11.64□□□□□ -0.55
CTSB-228ENST00000533455 GAGE2AQ6NT46 116 aa11.64□□□□□ -0.55
CTSB-228ENST00000533455 C19orf73Q9NVV2 129 aa11.64□□□□□ -0.55
CTSB-228ENST00000533455 DNAL4O96015 105 aa11.64□□□□□ -0.55
CTSB-228ENST00000533455 TMEM126AQ9H061 195 aa11.64□□□□□ -0.55
CTSB-228ENST00000533455 IGKV3OR2-268A0A0C4DH90 116 aa11.63□□□□□ -0.55
CTSB-228ENST00000533455 OBSCN-AS1Q96MR7 158 aa11.63□□□□□ -0.55
CTSB-228ENST00000533455 WFDC10AQ9H1F0 79 aa11.62□□□□□ -0.55
CTSB-228ENST00000533455 RPL35AP18077 110 aaKnown RBP11.62□□□□□ -0.55
CTSB-228ENST00000533455 WNK1Q9H4A3 2382 aa11.61□□□□□ -0.55
CTSB-228ENST00000533455 TEX15Q9BXT5 2789 aa11.61□□□□□ -0.55
CTSB-228ENST00000533455 IGLV1-51P01701 117 aa11.6□□□□□ -0.55
CTSB-228ENST00000533455 ESM1Q9NQ30 184 aa11.6□□□□□ -0.55
CTSB-228ENST00000533455 LY6G6DO95868 133 aa11.6□□□□□ -0.55
CTSB-228ENST00000533455 C3orf22Q8N5N4 141 aa11.6□□□□□ -0.55
CTSB-228ENST00000533455 LINC00959A0A1B0GUT2 108 aa11.59□□□□□ -0.55
CTSB-228ENST00000533455 NAV2Q8IVL1 2488 aa11.59□□□□□ -0.55
CTSB-228ENST00000533455 UQCRQO14949 82 aa11.59□□□□□ -0.55
CTSB-228ENST00000533455 HIST1H4AP62805 103 aaKnown RBP11.59□□□□□ -0.55
CTSB-228ENST00000533455 SMIM20Q8N5G0 67 aa11.59□□□□□ -0.55
CTSB-228ENST00000533455 NOTCH3Q9UM47 2321 aa11.58□□□□□ -0.56
CTSB-228ENST00000533455 APCP25054 2843 aa11.58□□□□□ -0.56
CTSB-228ENST00000533455 C9orf129Q5T035 196 aaKnown RBP11.58□□□□□ -0.56
CTSB-228ENST00000533455 PLA2G2AP14555 144 aa11.57□□□□□ -0.56
CTSB-228ENST00000533455 PFN2P35080 140 aa11.57□□□□□ -0.56
CTSB-228ENST00000533455 KLK5Q9Y337 293 aaPredicted RBP11.57□□□□□ -0.56
CTSB-228ENST00000533455 HELZ2Q9BYK8 2649 aaKnown RBP11.57□□□□□ -0.56
CTSB-228ENST00000533455 LECT2O14960 151 aa11.57□□□□□ -0.56
CTSB-228ENST00000533455 PAX4O43316 350 aa11.57□□□□□ -0.56
CTSB-228ENST00000533455 C14orf132Q9NPU4 83 aa11.57□□□□□ -0.56
CTSB-228ENST00000533455 LINC00526Q96FQ7 95 aa11.56□□□□□ -0.56
CTSB-228ENST00000533455 C16orf95Q9H693 158 aa11.56□□□□□ -0.56
CTSB-228ENST00000533455 C9orf153Q5TBE3 101 aa11.55□□□□□ -0.56
CTSB-228ENST00000533455 C2CD3Q4AC94 2353 aa11.55□□□□□ -0.56
CTSB-228ENST00000533455 Q6JHZ5 121 aa11.55□□□□□ -0.56
CTSB-228ENST00000533455 LINC01561Q8N1V8 128 aa11.55□□□□□ -0.56
CTSB-228ENST00000533455 LINC00612Q8N6U2 182 aa11.55□□□□□ -0.56
CTSB-228ENST00000533455 ZNF469Q96JG9 3925 aaPredicted RBP11.55□□□□□ -0.56
CTSB-228ENST00000533455 C6orf226Q5I0X4 101 aa11.54□□□□□ -0.56
CTSB-228ENST00000533455 Q8IZM0 81 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms