RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 RS1O15537 224 aa10.6□□□□□ -0.71
CAPN1-224ENST00000533129 ITPR3Q14573 2671 aa10.6□□□□□ -0.71
CAPN1-224ENST00000533129 NDUFA7O95182 113 aa10.6□□□□□ -0.71
CAPN1-224ENST00000533129 PRIMA1Q86XR5 153 aa10.6□□□□□ -0.71
CAPN1-224ENST00000533129 LINC00526Q96FQ7 95 aa10.6□□□□□ -0.71
CAPN1-224ENST00000533129 FAM218AQ96MZ4 157 aa10.59□□□□□ -0.71
CAPN1-224ENST00000533129 CSDC2Q9Y534 153 aaKnown RBP10.59□□□□□ -0.71
CAPN1-224ENST00000533129 DNAJC9-AS1A6NH13 148 aa10.57□□□□□ -0.72
CAPN1-224ENST00000533129 HIST2H2BDQ6DRA6 164 aa10.57□□□□□ -0.72
CAPN1-224ENST00000533129 UBE2E2Q96LR5 201 aa10.57□□□□□ -0.72
CAPN1-224ENST00000533129 UNC79Q9P2D8 2635 aa10.57□□□□□ -0.72
CAPN1-224ENST00000533129 SORL1Q92673 2214 aa10.57□□□□□ -0.72
CAPN1-224ENST00000533129 TEX15Q9BXT5 2789 aa10.57□□□□□ -0.72
CAPN1-224ENST00000533129 F5H768 121 aa10.56□□□□□ -0.72
CAPN1-224ENST00000533129 TRAV13-2A0A0B4J235 113 aa10.56□□□□□ -0.72
CAPN1-224ENST00000533129 RPL28P46779 137 aaKnown RBP10.56□□□□□ -0.72
CAPN1-224ENST00000533129 LINC00694P0DN24 101 aa10.55□□□□□ -0.72
CAPN1-224ENST00000533129 MALP21145 153 aa10.55□□□□□ -0.72
CAPN1-224ENST00000533129 COX7CP15954 63 aa10.55□□□□□ -0.72
CAPN1-224ENST00000533129 HIST1H4AP62805 103 aaKnown RBP10.55□□□□□ -0.72
CAPN1-224ENST00000533129 GAGE2AQ6NT46 116 aa10.55□□□□□ -0.72
CAPN1-224ENST00000533129 OVOL2Q9BRP0 275 aa10.55□□□□□ -0.72
CAPN1-224ENST00000533129 ZNF469Q96JG9 3925 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-224ENST00000533129 GCN1Q92616 2671 aaKnown RBP10.55□□□□□ -0.72
CAPN1-224ENST00000533129 TRAV13-1A0A0B4J241 112 aa10.54□□□□□ -0.72
CAPN1-224ENST00000533129 INSP01308 110 aa10.54□□□□□ -0.72
CAPN1-224ENST00000533129 CCDC168Q8NDH2 2452 aa10.53□□□□□ -0.72
CAPN1-224ENST00000533129 CRPP02741 224 aa10.53□□□□□ -0.72
CAPN1-224ENST00000533129 FLNAP21333 2647 aaKnown RBP10.53□□□□□ -0.72
CAPN1-224ENST00000533129 ATOX1O00244 68 aa10.53□□□□□ -0.72
CAPN1-224ENST00000533129 ESM1Q9NQ30 184 aa10.53□□□□□ -0.72
CAPN1-224ENST00000533129 MXRA5Q9NR99 2828 aa10.52□□□□□ -0.73
CAPN1-224ENST00000533129 C2orf48Q96LS8 159 aa10.52□□□□□ -0.73
CAPN1-224ENST00000533129 MAP6D1Q9H9H5 199 aa10.52□□□□□ -0.73
CAPN1-224ENST00000533129 CDC42SE2Q9NRR3 84 aa10.52□□□□□ -0.73
CAPN1-224ENST00000533129 TRBV10-1A0A0K0K1A3 114 aa10.52□□□□□ -0.73
CAPN1-224ENST00000533129 Q9HAA7 133 aa10.52□□□□□ -0.73
CAPN1-224ENST00000533129 CRYGAP11844 174 aa10.51□□□□□ -0.73
CAPN1-224ENST00000533129 SLURP1P55000 103 aa10.51□□□□□ -0.73
CAPN1-224ENST00000533129 RPL36AP83881 106 aaKnown RBP10.51□□□□□ -0.73
CAPN1-224ENST00000533129 RPL36ALQ969Q0 106 aaKnown RBP10.51□□□□□ -0.73
CAPN1-224ENST00000533129 NTM-AS1Q6ZSK4 140 aa10.51□□□□□ -0.73
CAPN1-224ENST00000533129 AKAP9Q99996 3911 aa10.51□□□□□ -0.73
CAPN1-224ENST00000533129 ITPR2Q14571 2701 aa10.5□□□□□ -0.73
CAPN1-224ENST00000533129 A0A1B0GX51 115 aa10.5□□□□□ -0.73
CAPN1-224ENST00000533129 RNASE1P07998 156 aaKnown RBP10.5□□□□□ -0.73
CAPN1-224ENST00000533129 DNAL4O96015 105 aa10.5□□□□□ -0.73
CAPN1-224ENST00000533129 LINC00337Q8N6G1 96 aa10.49□□□□□ -0.73
CAPN1-224ENST00000533129 IL17DQ8TAD2 202 aa10.49□□□□□ -0.73
CAPN1-224ENST00000533129 C1orf43Q9BWL3 253 aa10.49□□□□□ -0.73
CAPN1-224ENST00000533129 K7EQD1 137 aa10.49□□□□□ -0.73
CAPN1-224ENST00000533129 C4orf3Q8WVX3 66 aa10.49□□□□□ -0.73
CAPN1-224ENST00000533129 IGKV2-28A0A075B6P5 120 aa10.48□□□□□ -0.73
CAPN1-224ENST00000533129 J3KT08 172 aa10.48□□□□□ -0.73
CAPN1-224ENST00000533129 IGKV2D-28P01615 120 aa10.48□□□□□ -0.73
CAPN1-224ENST00000533129 OBSCN-AS1Q96MR7 158 aa10.48□□□□□ -0.73
CAPN1-224ENST00000533129 SND1-IT1Q9HBX3 110 aa10.48□□□□□ -0.73
CAPN1-224ENST00000533129 DEFB136Q30KP8 78 aa10.48□□□□□ -0.73
CAPN1-224ENST00000533129 HILS1P60008 231 aa10.47□□□□□ -0.73
CAPN1-224ENST00000533129 MIR7-3HGQ8N6C7 128 aa10.47□□□□□ -0.73
CAPN1-224ENST00000533129 TRGV1A0A0A0MS02 117 aa10.47□□□□□ -0.73
CAPN1-224ENST00000533129 H0YGX0 51 aa10.47□□□□□ -0.73
CAPN1-224ENST00000533129 Q6JHZ5 121 aa10.47□□□□□ -0.73
CAPN1-224ENST00000533129 C16orf95Q9H693 158 aa10.47□□□□□ -0.73
CAPN1-224ENST00000533129 A0A087WYN8 130 aa10.46□□□□□ -0.73
CAPN1-224ENST00000533129 RPL18AQ02543 176 aaKnown RBP10.46□□□□□ -0.73
CAPN1-224ENST00000533129 SMIM11BQ8TCY0 68 aa10.46□□□□□ -0.73
CAPN1-224ENST00000533129 COX7B2Q8TF08 81 aa10.46□□□□□ -0.73
CAPN1-224ENST00000533129 SMR3AQ99954 134 aa10.46□□□□□ -0.73
CAPN1-224ENST00000533129 KLK5Q9Y337 293 aaPredicted RBP10.46□□□□□ -0.73
CAPN1-224ENST00000533129 LY6G6DO95868 133 aa10.46□□□□□ -0.74
CAPN1-224ENST00000533129 KHDC1LQ5JSQ8 128 aa10.46□□□□□ -0.74
CAPN1-224ENST00000533129 FASNP49327 2511 aaKnown RBP10.45□□□□□ -0.74
CAPN1-224ENST00000533129 C18orf65Q6ZTR6 163 aa10.45□□□□□ -0.74
CAPN1-224ENST00000533129 TLN2Q9Y4G6 2542 aa10.45□□□□□ -0.74
CAPN1-224ENST00000533129 DYNLRB2Q8TF09 96 aa10.45□□□□□ -0.74
CAPN1-224ENST00000533129 UBE2L6O14933 153 aa10.44□□□□□ -0.74
CAPN1-224ENST00000533129 TMEM243Q9BU79 118 aa10.44□□□□□ -0.74
CAPN1-224ENST00000533129 C14orf132Q9NPU4 83 aa10.44□□□□□ -0.74
CAPN1-224ENST00000533129 XCL2Q9UBD3 114 aa10.44□□□□□ -0.74
CAPN1-224ENST00000533129 HECTD1Q9ULT8 2610 aa10.44□□□□□ -0.74
CAPN1-224ENST00000533129 RPS28P62857 69 aaKnown RBP10.44□□□□□ -0.74
CAPN1-224ENST00000533129 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
CAPN1-224ENST00000533129 C1orf158Q8N1D5 194 aa10.43□□□□□ -0.74
CAPN1-224ENST00000533129 LOC107984640A0A0U1RRK4 108 aa10.43□□□□□ -0.74
CAPN1-224ENST00000533129 ANK3Q12955 4377 aaKnown RBP10.43□□□□□ -0.74
CAPN1-224ENST00000533129 DEFB114Q30KQ6 69 aa10.43□□□□□ -0.74
CAPN1-224ENST00000533129 LINC01006Q8NI28 216 aa10.43□□□□□ -0.74
CAPN1-224ENST00000533129 SONP18583 2426 aaKnown RBP10.42□□□□□ -0.74
CAPN1-224ENST00000533129 hADV29S1A0JD25 119 aa10.42□□□□□ -0.74
CAPN1-224ENST00000533129 CCL18P55774 89 aa10.42□□□□□ -0.74
CAPN1-224ENST00000533129 Q6ZTI0 123 aa10.42□□□□□ -0.74
CAPN1-224ENST00000533129 LINC00846Q9NV44 126 aa10.42□□□□□ -0.74
CAPN1-224ENST00000533129 LINC00158P58513 81 aa10.41□□□□□ -0.74
CAPN1-224ENST00000533129 IBA57-AS1B1ANH7 110 aa10.41□□□□□ -0.74
CAPN1-224ENST00000533129 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.74
CAPN1-224ENST00000533129 SERP2Q8N6R1 65 aa10.4□□□□□ -0.74
CAPN1-224ENST00000533129 TOMM7Q9P0U1 55 aa10.4□□□□□ -0.74
CAPN1-224ENST00000533129 LECT2O14960 151 aa10.39□□□□□ -0.75
CAPN1-224ENST00000533129 ODF3L2Q3SX64 289 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms