RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 APOMO95445 188 aa19.14■□□□□ 0.65
SSSCA1-207ENST00000533115 Q8N8P6 123 aa19.14■□□□□ 0.65
SSSCA1-207ENST00000533115 SEC11CQ9BY50 192 aa19.13■□□□□ 0.65
SSSCA1-207ENST00000533115 LINC00474Q9P2X8 69 aa19.13■□□□□ 0.65
SSSCA1-207ENST00000533115 LRP1Q07954 4544 aaKnown RBP19.12■□□□□ 0.65
SSSCA1-207ENST00000533115 HNRNPA3P51991 378 aaKnown RBP19.12■□□□□ 0.65
SSSCA1-207ENST00000533115 STPG4Q8N801 248 aa19.12■□□□□ 0.65
SSSCA1-207ENST00000533115 Q6ZRU5 148 aa19.11■□□□□ 0.65
SSSCA1-207ENST00000533115 IGHV3OR16-9A0A0B4J2B5 98 aa19.1■□□□□ 0.65
SSSCA1-207ENST00000533115 COMMD7Q86VX2 200 aa19.1■□□□□ 0.65
SSSCA1-207ENST00000533115 C2orf48Q96LS8 159 aa19.1■□□□□ 0.65
SSSCA1-207ENST00000533115 CAMK2N2Q96S95 79 aa19.1■□□□□ 0.65
SSSCA1-207ENST00000533115 IGLV4-3A0A075B6K6 122 aa19.09■□□□□ 0.65
SSSCA1-207ENST00000533115 FAT3Q8TDW7 4589 aa19.09■□□□□ 0.65
SSSCA1-207ENST00000533115 TRAV9-1A0A075B6T8 112 aa19.08■□□□□ 0.64
SSSCA1-207ENST00000533115 SPAG11BQ08648 103 aa19.08■□□□□ 0.64
SSSCA1-207ENST00000533115 OR10D4PQ8NGN7 298 aa19.08■□□□□ 0.64
SSSCA1-207ENST00000533115 C7orf33Q8WU49 177 aa19.08■□□□□ 0.64
SSSCA1-207ENST00000533115 OXTP01178 125 aa19.07■□□□□ 0.64
SSSCA1-207ENST00000533115 ORMDL2Q53FV1 153 aa19.07■□□□□ 0.64
SSSCA1-207ENST00000533115 TMEM141Q96I45 108 aa19.07■□□□□ 0.64
SSSCA1-207ENST00000533115 CYSLTR1Q9Y271 337 aa19.07■□□□□ 0.64
SSSCA1-207ENST00000533115 K7EMI3 77 aa19.06■□□□□ 0.64
SSSCA1-207ENST00000533115 C2orf66Q6UXQ4 117 aa19.06■□□□□ 0.64
SSSCA1-207ENST00000533115 LOC107984640A0A0U1RRK4 108 aa19.05■□□□□ 0.64
SSSCA1-207ENST00000533115 NXT2Q9NPJ8 142 aaKnown RBP19.05■□□□□ 0.64
SSSCA1-207ENST00000533115 ORAOV1Q8WV07 137 aa19.04■□□□□ 0.64
SSSCA1-207ENST00000533115 TGIF2-C20orf24A0A0A6YYL0 155 aa19.03■□□□□ 0.64
SSSCA1-207ENST00000533115 S100PP25815 95 aa19.03■□□□□ 0.64
SSSCA1-207ENST00000533115 PTTG1IPP53801 180 aa19.03■□□□□ 0.64
SSSCA1-207ENST00000533115 KIAA1644Q3SXP7 199 aa19.03■□□□□ 0.64
SSSCA1-207ENST00000533115 LINC00242Q5T6M2 205 aa19.02■□□□□ 0.64
SSSCA1-207ENST00000533115 TEX43Q6ZNM6 134 aa19.02■□□□□ 0.64
SSSCA1-207ENST00000533115 GAGE2BQ13066 116 aa19.01■□□□□ 0.63
SSSCA1-207ENST00000533115 C10orf91Q5T1B1 145 aa19■□□□□ 0.63
SSSCA1-207ENST00000533115 F8WDY8 70 aa18.99■□□□□ 0.63
SSSCA1-207ENST00000533115 RNF151Q2KHN1 245 aa18.99■□□□□ 0.63
SSSCA1-207ENST00000533115 Q6ZN92 141 aa18.99■□□□□ 0.63
SSSCA1-207ENST00000533115 C2orf88Q9BSF0 95 aa18.99■□□□□ 0.63
SSSCA1-207ENST00000533115 A0A087WZ39 114 aa18.98■□□□□ 0.63
SSSCA1-207ENST00000533115 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.98■□□□□ 0.63
SSSCA1-207ENST00000533115 NPSP0C0P6 89 aa18.98■□□□□ 0.63
SSSCA1-207ENST00000533115 UBE2D1P51668 147 aa18.98■□□□□ 0.63
SSSCA1-207ENST00000533115 GNB1LQ9BYB4 327 aa18.98■□□□□ 0.63
SSSCA1-207ENST00000533115 AMELXQ99217 191 aa18.97■□□□□ 0.63
SSSCA1-207ENST00000533115 A0A0J9YXV3 536 aa18.96■□□□□ 0.63
SSSCA1-207ENST00000533115 IGIPA6NJ69 53 aa18.96■□□□□ 0.63
SSSCA1-207ENST00000533115 ZC2HC1BQ5TFG8 222 aa18.96■□□□□ 0.63
SSSCA1-207ENST00000533115 LINC00173Q6ZV60 143 aa18.96■□□□□ 0.63
SSSCA1-207ENST00000533115 VCX2Q9H322 139 aa18.96■□□□□ 0.63
SSSCA1-207ENST00000533115 MRPL35Q9NZE8 188 aaKnown RBP18.96■□□□□ 0.63
SSSCA1-207ENST00000533115 CARHSP1Q9Y2V2 147 aaKnown RBP18.96■□□□□ 0.63
SSSCA1-207ENST00000533115 NDUFA1O15239 70 aa18.95■□□□□ 0.62
SSSCA1-207ENST00000533115 G0S2P27469 103 aa18.95■□□□□ 0.62
SSSCA1-207ENST00000533115 RPL18AQ02543 176 aaKnown RBP18.94■□□□□ 0.62
SSSCA1-207ENST00000533115 RHEBQ15382 184 aa18.93■□□□□ 0.62
SSSCA1-207ENST00000533115 PRR3P79522 188 aaKnown RBP18.92■□□□□ 0.62
SSSCA1-207ENST00000533115 COX19Q49B96 90 aa18.92■□□□□ 0.62
SSSCA1-207ENST00000533115 RPS10P5Q9NQ39 176 aa18.92■□□□□ 0.62
SSSCA1-207ENST00000533115 C10orf25Q5T742 122 aa18.91■□□□□ 0.62
SSSCA1-207ENST00000533115 TOMM6Q96B49 74 aa18.91■□□□□ 0.62
SSSCA1-207ENST00000533115 KIAA0087Q14695 138 aa18.9■□□□□ 0.62
SSSCA1-207ENST00000533115 UNQ6190/PRO20217Q6UXQ8 127 aa18.9■□□□□ 0.62
SSSCA1-207ENST00000533115 LINC01561Q8N1V8 128 aa18.9■□□□□ 0.62
SSSCA1-207ENST00000533115 ALKBH7Q9BT30 221 aaPredicted RBP18.9■□□□□ 0.62
SSSCA1-207ENST00000533115 A0A1W2PNN7 141 aa18.89■□□□□ 0.61
SSSCA1-207ENST00000533115 PAPPA-AS1Q5QFB9 102 aa18.89■□□□□ 0.61
SSSCA1-207ENST00000533115 TIMM17AQ99595 171 aa18.89■□□□□ 0.61
SSSCA1-207ENST00000533115 MT-ND6P03923 174 aa18.88■□□□□ 0.61
SSSCA1-207ENST00000533115 FAM19A3Q7Z5A8 133 aa18.88■□□□□ 0.61
SSSCA1-207ENST00000533115 C6orf48Q9UBA6 75 aa18.87■□□□□ 0.61
SSSCA1-207ENST00000533115 C9orf116Q5BN46 136 aaPredicted RBP18.86■□□□□ 0.61
SSSCA1-207ENST00000533115 MRPL18Q9H0U6 180 aaKnown RBP18.86■□□□□ 0.61
SSSCA1-207ENST00000533115 LINC01546A6NGU7 62 aa18.84■□□□□ 0.61
SSSCA1-207ENST00000533115 TLX1NBP0CAT3 122 aa18.84■□□□□ 0.61
SSSCA1-207ENST00000533115 FABP9Q0Z7S8 132 aa18.84■□□□□ 0.61
SSSCA1-207ENST00000533115 ERASQ7Z444 233 aa18.84■□□□□ 0.61
SSSCA1-207ENST00000533115 SCGB3A1Q96QR1 104 aa18.83■□□□□ 0.6
SSSCA1-207ENST00000533115 SEC11AP67812 179 aa18.82■□□□□ 0.6
SSSCA1-207ENST00000533115 Q6ZRP5 223 aa18.82■□□□□ 0.6
SSSCA1-207ENST00000533115 HERVK_113P63121 156 aa18.81■□□□□ 0.6
SSSCA1-207ENST00000533115 TRBV30A0A0K0K1B3 111 aa18.8■□□□□ 0.6
SSSCA1-207ENST00000533115 LINC01549A6NIU2 74 aa18.8■□□□□ 0.6
SSSCA1-207ENST00000533115 C2orf82Q6UX34 121 aa18.8■□□□□ 0.6
SSSCA1-207ENST00000533115 APOC3P02656 99 aa18.78■□□□□ 0.6
SSSCA1-207ENST00000533115 FA2HQ7L5A8 372 aa18.78■□□□□ 0.6
SSSCA1-207ENST00000533115 GEMIN7Q9H840 131 aaKnown RBP18.78■□□□□ 0.6
SSSCA1-207ENST00000533115 PRSS2P07478 247 aa18.77■□□□□ 0.6
SSSCA1-207ENST00000533115 PACRGQ96M98 296 aaPredicted RBP18.77■□□□□ 0.6
SSSCA1-207ENST00000533115 CDKN2A-AS1Q9UH64 79 aa18.77■□□□□ 0.6
SSSCA1-207ENST00000533115 MT1HL1P0DM35 61 aa18.76■□□□□ 0.59
SSSCA1-207ENST00000533115 GAGE2EQ4V326 116 aa18.76■□□□□ 0.59
SSSCA1-207ENST00000533115 SERTAD4-AS1Q5TG53 156 aa18.76■□□□□ 0.59
SSSCA1-207ENST00000533115 SMCO4Q9NRQ5 59 aa18.76■□□□□ 0.59
SSSCA1-207ENST00000533115 TOMM7Q9P0U1 55 aa18.76■□□□□ 0.59
SSSCA1-207ENST00000533115 GAGE2DQ9UEU5 116 aa18.76■□□□□ 0.59
SSSCA1-207ENST00000533115 PHF5AQ7RTV0 110 aaKnown RBP18.75■□□□□ 0.59
SSSCA1-207ENST00000533115 C6orf226Q5I0X4 101 aa18.74■□□□□ 0.59
SSSCA1-207ENST00000533115 Q8IZM0 81 aa18.74■□□□□ 0.59
SSSCA1-207ENST00000533115 SNAPINO95295 136 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms