RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.92□□□□□ -0.66
PKP3-209ENST00000533069 IGKV2-29A2NJV5 120 aaPredicted RBP10.92□□□□□ -0.66
PKP3-209ENST00000533069 IGIPA6NJ69 53 aa10.92□□□□□ -0.66
PKP3-209ENST00000533069 REG3AQ06141 175 aa10.92□□□□□ -0.66
PKP3-209ENST00000533069 CLPSL2Q6UWE3 100 aa10.92□□□□□ -0.66
PKP3-209ENST00000533069 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
PKP3-209ENST00000533069 IFI27L1Q96BM0 104 aa10.92□□□□□ -0.66
PKP3-209ENST00000533069 MAP1LC3CQ9BXW4 147 aa10.92□□□□□ -0.66
PKP3-209ENST00000533069 FABP4P15090 132 aa10.91□□□□□ -0.66
PKP3-209ENST00000533069 RPL39P62891 51 aaKnown RBP10.91□□□□□ -0.66
PKP3-209ENST00000533069 TRAV8-4A0A0B4J246 113 aa10.9□□□□□ -0.66
PKP3-209ENST00000533069 Q6ZSA8 131 aa10.9□□□□□ -0.66
PKP3-209ENST00000533069 DEFB104AQ8WTQ1 72 aa10.9□□□□□ -0.66
PKP3-209ENST00000533069 IGLV4-60A0A075B6I1 120 aa10.89□□□□□ -0.67
PKP3-209ENST00000533069 USP17L23D6RBM5 183 aa10.89□□□□□ -0.67
PKP3-209ENST00000533069 Q5VSD8 79 aa10.89□□□□□ -0.67
PKP3-209ENST00000533069 FAM30AQ9NZY2 134 aa10.89□□□□□ -0.67
PKP3-209ENST00000533069 TRAV12-1A0A0B4J245 112 aa10.88□□□□□ -0.67
PKP3-209ENST00000533069 KRTAP26-1Q6PEX3 210 aa10.88□□□□□ -0.67
PKP3-209ENST00000533069 C2orf88Q9BSF0 95 aa10.88□□□□□ -0.67
PKP3-209ENST00000533069 VCX2Q9H322 139 aa10.88□□□□□ -0.67
PKP3-209ENST00000533069 IGLV4-3A0A075B6K6 122 aa10.87□□□□□ -0.67
PKP3-209ENST00000533069 C20orf202A1L168 122 aa10.87□□□□□ -0.67
PKP3-209ENST00000533069 CCL25O15444 150 aa10.87□□□□□ -0.67
PKP3-209ENST00000533069 PRSS1P07477 247 aa10.87□□□□□ -0.67
PKP3-209ENST00000533069 HAMPP81172 84 aa10.87□□□□□ -0.67
PKP3-209ENST00000533069 PET117Q6UWS5 81 aa10.87□□□□□ -0.67
PKP3-209ENST00000533069 TEX43Q6ZNM6 134 aa10.87□□□□□ -0.67
PKP3-209ENST00000533069 ZNF664Q8N3J9 261 aa10.87□□□□□ -0.67
PKP3-209ENST00000533069 CDC42SE2Q9NRR3 84 aa10.87□□□□□ -0.67
PKP3-209ENST00000533069 IFITM10A6NMD0 228 aa10.86□□□□□ -0.67
PKP3-209ENST00000533069 FAM229AH3BQW9 127 aa10.86□□□□□ -0.67
PKP3-209ENST00000533069 PMVKQ15126 192 aa10.86□□□□□ -0.67
PKP3-209ENST00000533069 IGLV10-54A0A075B6I4 117 aa10.85□□□□□ -0.67
PKP3-209ENST00000533069 SYS1-DBNDD2H3BUS1 97 aa10.85□□□□□ -0.67
PKP3-209ENST00000533069 SMR3BP02814 79 aaPredicted RBP10.85□□□□□ -0.67
PKP3-209ENST00000533069 SEC11AP67812 179 aa10.85□□□□□ -0.67
PKP3-209ENST00000533069 AMELXQ99217 191 aa10.85□□□□□ -0.67
PKP3-209ENST00000533069 LINC01620Q4KN68 170 aa10.84□□□□□ -0.67
PKP3-209ENST00000533069 DNAH8Q96JB1 4490 aa10.84□□□□□ -0.67
PKP3-209ENST00000533069 C3orf79P0CE67 100 aa10.83□□□□□ -0.68
PKP3-209ENST00000533069 KRTDAPP60985 99 aa10.83□□□□□ -0.68
PKP3-209ENST00000533069 Q6ZUT4 128 aa10.83□□□□□ -0.68
PKP3-209ENST00000533069 OR10D4PQ8NGN7 298 aa10.83□□□□□ -0.68
PKP3-209ENST00000533069 VPS13BQ7Z7G8 4022 aa10.83□□□□□ -0.68
PKP3-209ENST00000533069 FAT1Q14517 4588 aa10.82□□□□□ -0.68
PKP3-209ENST00000533069 CST9LQ9H4G1 147 aa10.82□□□□□ -0.68
PKP3-209ENST00000533069 INAFM2P0DMQ5 153 aa10.81□□□□□ -0.68
PKP3-209ENST00000533069 LINC00173Q6ZV60 143 aa10.81□□□□□ -0.68
PKP3-209ENST00000533069 F8VRH5 84 aa10.8□□□□□ -0.68
PKP3-209ENST00000533069 PLNP26678 52 aa10.8□□□□□ -0.68
PKP3-209ENST00000533069 LINC01545Q5VT33 79 aa10.8□□□□□ -0.68
PKP3-209ENST00000533069 SCXQ7RTU7 201 aa10.8□□□□□ -0.68
PKP3-209ENST00000533069 FAM19A3Q7Z5A8 133 aa10.8□□□□□ -0.68
PKP3-209ENST00000533069 CHAC1Q9BUX1 264 aa10.8□□□□□ -0.68
PKP3-209ENST00000533069 CNBPP62633 177 aaKnown RBP10.79□□□□□ -0.68
PKP3-209ENST00000533069 SS18Q15532 418 aa10.79□□□□□ -0.68
PKP3-209ENST00000533069 C9orf163Q8N9P6 203 aa10.79□□□□□ -0.68
PKP3-209ENST00000533069 FAM104AQ969W3 186 aa10.79□□□□□ -0.68
PKP3-209ENST00000533069 CHTOPQ9Y3Y2 248 aaKnown RBP10.79□□□□□ -0.68
PKP3-209ENST00000533069 IGKV3OR2-268A0A0C4DH90 116 aa10.78□□□□□ -0.68
PKP3-209ENST00000533069 hDV102S1A0JD36 115 aa10.78□□□□□ -0.68
PKP3-209ENST00000533069 ODF1Q14990 250 aa10.78□□□□□ -0.68
PKP3-209ENST00000533069 OPRPNQ99935 248 aaPredicted RBP10.78□□□□□ -0.68
PKP3-209ENST00000533069 SRRM2Q9UQ35 2752 aaKnown RBP10.78□□□□□ -0.68
PKP3-209ENST00000533069 TINCRA0A1B0GVN0 87 aa10.77□□□□□ -0.69
PKP3-209ENST00000533069 GAGE12HA6NDE8 117 aa10.77□□□□□ -0.69
PKP3-209ENST00000533069 H0Y8G0 127 aa10.77□□□□□ -0.69
PKP3-209ENST00000533069 PLA2G1BP04054 148 aaKnown RBP10.77□□□□□ -0.69
PKP3-209ENST00000533069 UBE2D1P51668 147 aa10.77□□□□□ -0.69
PKP3-209ENST00000533069 HERVK_113P63121 156 aa10.77□□□□□ -0.69
PKP3-209ENST00000533069 JOSD1Q15040 202 aaPredicted RBP10.77□□□□□ -0.69
PKP3-209ENST00000533069 CFAP161Q6P656 301 aa10.77□□□□□ -0.69
PKP3-209ENST00000533069 LINC00528Q8N1L1 170 aa10.77□□□□□ -0.69
PKP3-209ENST00000533069 CHCHD10Q8WYQ3 142 aaPredicted RBP10.77□□□□□ -0.69
PKP3-209ENST00000533069 LOC105371267A0A1B0GV96 52 aa10.76□□□□□ -0.69
PKP3-209ENST00000533069 DPM2O94777 84 aa10.76□□□□□ -0.69
PKP3-209ENST00000533069 IGLC3P0DOY3 106 aa10.76□□□□□ -0.69
PKP3-209ENST00000533069 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.75□□□□□ -0.69
PKP3-209ENST00000533069 TRAV13-1A0A0B4J241 112 aa10.75□□□□□ -0.69
PKP3-209ENST00000533069 LINC00959A0A1B0GUT2 108 aa10.75□□□□□ -0.69
PKP3-209ENST00000533069 SCGB1D1O95968 90 aa10.75□□□□□ -0.69
PKP3-209ENST00000533069 CIRBP-AS1Q8TBR5 109 aa10.75□□□□□ -0.69
PKP3-209ENST00000533069 GEMIN7Q9H840 131 aaKnown RBP10.75□□□□□ -0.69
PKP3-209ENST00000533069 MRPL35Q9NZE8 188 aaKnown RBP10.75□□□□□ -0.69
PKP3-209ENST00000533069 IGKCP01834 107 aa10.74□□□□□ -0.69
PKP3-209ENST00000533069 RNASE13Q5GAN3 156 aaKnown RBP10.74□□□□□ -0.69
PKP3-209ENST00000533069 C15orf56Q8N910 161 aa10.73□□□□□ -0.69
PKP3-209ENST00000533069 IGLV4-69A0A075B6H9 119 aa10.72□□□□□ -0.69
PKP3-209ENST00000533069 IGHV3-64A0A075B6Q5 118 aa10.72□□□□□ -0.69
PKP3-209ENST00000533069 IGLV5-45A0A087WSX0 123 aa10.72□□□□□ -0.69
PKP3-209ENST00000533069 H3BRM9 83 aa10.72□□□□□ -0.69
PKP3-209ENST00000533069 SMIM6P0DI80 62 aa10.72□□□□□ -0.69
PKP3-209ENST00000533069 LINC00242Q5T6M2 205 aa10.72□□□□□ -0.69
PKP3-209ENST00000533069 SDIM1Q6ZPB5 146 aa10.72□□□□□ -0.69
PKP3-209ENST00000533069 A0A0J9YXV3 536 aa10.71□□□□□ -0.69
PKP3-209ENST00000533069 FOXI1Q12951 378 aa10.71□□□□□ -0.69
PKP3-209ENST00000533069 CD164L2Q6UWJ8 174 aa10.71□□□□□ -0.69
PKP3-209ENST00000533069 LINC01561Q8N1V8 128 aa10.71□□□□□ -0.69
PKP3-209ENST00000533069 GVQW2A0A096LPI5 108 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms