RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 LECT2O14960 151 aa11.15□□□□□ -0.62
SF3B2-211ENST00000531041 FABP4P15090 132 aa11.15□□□□□ -0.62
SF3B2-211ENST00000531041 COX6A2Q02221 97 aa11.15□□□□□ -0.62
SF3B2-211ENST00000531041 TRAV12-1A0A0B4J245 112 aa11.14□□□□□ -0.63
SF3B2-211ENST00000531041 A0A0J9YXV3 536 aa11.14□□□□□ -0.63
SF3B2-211ENST00000531041 COX7A2LO14548 114 aa11.14□□□□□ -0.63
SF3B2-211ENST00000531041 FAT2Q9NYQ8 4349 aa11.13□□□□□ -0.63
SF3B2-211ENST00000531041 TINCRA0A1B0GVN0 87 aa11.13□□□□□ -0.63
SF3B2-211ENST00000531041 A0A1B0GVY2 172 aa11.13□□□□□ -0.63
SF3B2-211ENST00000531041 S100A6P06703 90 aa11.13□□□□□ -0.63
SF3B2-211ENST00000531041 HERVK_113P63121 156 aa11.13□□□□□ -0.63
SF3B2-211ENST00000531041 C14orf177Q52M58 125 aa11.13□□□□□ -0.63
SF3B2-211ENST00000531041 CFAP161Q6P656 301 aa11.13□□□□□ -0.63
SF3B2-211ENST00000531041 C5orf38Q86SI9 138 aa11.13□□□□□ -0.63
SF3B2-211ENST00000531041 Q8N814 137 aa11.13□□□□□ -0.63
SF3B2-211ENST00000531041 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
SF3B2-211ENST00000531041 GEMIN7Q9H840 131 aaKnown RBP11.12□□□□□ -0.63
SF3B2-211ENST00000531041 A0A087WZ39 114 aa11.11□□□□□ -0.63
SF3B2-211ENST00000531041 IGHV1-58A0A0C4DH39 117 aa11.1□□□□□ -0.63
SF3B2-211ENST00000531041 IGLC3P0DOY3 106 aa11.1□□□□□ -0.63
SF3B2-211ENST00000531041 MALP21145 153 aa11.1□□□□□ -0.63
SF3B2-211ENST00000531041 LINC01561Q8N1V8 128 aa11.1□□□□□ -0.63
SF3B2-211ENST00000531041 MAP1LC3CQ9BXW4 147 aa11.1□□□□□ -0.63
SF3B2-211ENST00000531041 PKD1P98161 4303 aa11.1□□□□□ -0.63
SF3B2-211ENST00000531041 IGLV4-69A0A075B6H9 119 aa11.09□□□□□ -0.63
SF3B2-211ENST00000531041 IGLV5-45A0A087WSX0 123 aa11.09□□□□□ -0.63
SF3B2-211ENST00000531041 CDKN2A-AS1Q9UH64 79 aa11.09□□□□□ -0.63
SF3B2-211ENST00000531041 CHTOPQ9Y3Y2 248 aaKnown RBP11.09□□□□□ -0.63
SF3B2-211ENST00000531041 GVQW2A0A096LPI5 108 aaPredicted RBP11.09□□□□□ -0.63
SF3B2-211ENST00000531041 APOMO95445 188 aa11.09□□□□□ -0.63
SF3B2-211ENST00000531041 HIST3H2BBQ8N257 126 aa11.09□□□□□ -0.63
SF3B2-211ENST00000531041 F8VRH5 84 aa11.08□□□□□ -0.64
SF3B2-211ENST00000531041 ODF1Q14990 250 aa11.08□□□□□ -0.64
SF3B2-211ENST00000531041 NTN5Q8WTR8 489 aaPredicted RBP11.08□□□□□ -0.64
SF3B2-211ENST00000531041 CHAC1Q9BUX1 264 aa11.08□□□□□ -0.64
SF3B2-211ENST00000531041 IGHV3-64A0A075B6Q5 118 aa11.07□□□□□ -0.64
SF3B2-211ENST00000531041 hDV102S1A0JD36 115 aa11.07□□□□□ -0.64
SF3B2-211ENST00000531041 H0Y8G0 127 aa11.07□□□□□ -0.64
SF3B2-211ENST00000531041 KRTAP10-2P60368 255 aa11.07□□□□□ -0.64
SF3B2-211ENST00000531041 SPATA12Q7Z6I5 190 aa11.07□□□□□ -0.64
SF3B2-211ENST00000531041 LINC00469Q8N7U9 141 aa11.07□□□□□ -0.64
SF3B2-211ENST00000531041 PGPEP1Q9NXJ5 209 aa11.07□□□□□ -0.64
SF3B2-211ENST00000531041 MRPL35Q9NZE8 188 aaKnown RBP11.07□□□□□ -0.64
SF3B2-211ENST00000531041 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-211ENST00000531041 C5orf52A6NGY3 159 aa11.06□□□□□ -0.64
SF3B2-211ENST00000531041 C11orf86A6NJI1 115 aa11.06□□□□□ -0.64
SF3B2-211ENST00000531041 SNRPEP62304 92 aaKnown RBP11.06□□□□□ -0.64
SF3B2-211ENST00000531041 OR10D4PQ8NGN7 298 aa11.06□□□□□ -0.64
SF3B2-211ENST00000531041 SYS1-DBNDD2H3BUS1 97 aa11.05□□□□□ -0.64
SF3B2-211ENST00000531041 S100A2P29034 98 aa11.05□□□□□ -0.64
SF3B2-211ENST00000531041 HIGD2BQ4VC39 106 aa11.05□□□□□ -0.64
SF3B2-211ENST00000531041 CDPF1Q6NVV7 123 aa11.05□□□□□ -0.64
SF3B2-211ENST00000531041 ZNF561-AS1K7EIQ3 104 aa11.04□□□□□ -0.64
SF3B2-211ENST00000531041 ZNF22P17026 224 aaPredicted RBP11.04□□□□□ -0.64
SF3B2-211ENST00000531041 ORAOV1Q8WV07 137 aa11.04□□□□□ -0.64
SF3B2-211ENST00000531041 HIST1H2BLQ99880 126 aa11.04□□□□□ -0.64
SF3B2-211ENST00000531041 H3BRM9 83 aa11.03□□□□□ -0.64
SF3B2-211ENST00000531041 C3orf79P0CE67 100 aa11.03□□□□□ -0.64
SF3B2-211ENST00000531041 SMIM1B2RUZ4 78 aa11.02□□□□□ -0.64
SF3B2-211ENST00000531041 CNBPP62633 177 aaKnown RBP11.02□□□□□ -0.64
SF3B2-211ENST00000531041 PET117Q6UWS5 81 aa11.02□□□□□ -0.64
SF3B2-211ENST00000531041 DNAH11Q96DT5 4516 aa11.02□□□□□ -0.64
SF3B2-211ENST00000531041 IGLV5-52A0A0A0MRZ9 124 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 SLPIP03973 132 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 PLNP26678 52 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 FUSP35637 526 aaKnown RBP eCLIP11.01□□□□□ -0.65
SF3B2-211ENST00000531041 SPAG11BQ08648 103 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 TMEM170BQ5T4T1 132 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 LINC00526Q96FQ7 95 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 HECTD4Q9Y4D8 3996 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 DPM2O94777 84 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 KRTDAPP60985 99 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 KIAA0087Q14695 138 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 LINC01545Q5VT33 79 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 C2orf48Q96LS8 159 aa11.01□□□□□ -0.65
SF3B2-211ENST00000531041 F8WDY8 70 aa11□□□□□ -0.65
SF3B2-211ENST00000531041 SPINK8P0C7L1 97 aa11□□□□□ -0.65
SF3B2-211ENST00000531041 PMCHL2Q9BQD1 86 aa11□□□□□ -0.65
SF3B2-211ENST00000531041 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.99□□□□□ -0.65
SF3B2-211ENST00000531041 Q8IZM0 81 aa10.99□□□□□ -0.65
SF3B2-211ENST00000531041 C9orf163Q8N9P6 203 aa10.99□□□□□ -0.65
SF3B2-211ENST00000531041 IGLV5-39A0A0G2JS06 123 aa10.98□□□□□ -0.65
SF3B2-211ENST00000531041 IGKCP01834 107 aa10.98□□□□□ -0.65
SF3B2-211ENST00000531041 TMA7Q9Y2S6 64 aaKnown RBP10.98□□□□□ -0.65
SF3B2-211ENST00000531041 TMEM223A0PJW6 202 aa10.97□□□□□ -0.65
SF3B2-211ENST00000531041 PRSS2P07478 247 aa10.97□□□□□ -0.65
SF3B2-211ENST00000531041 SYCNQ0VAF6 134 aa10.97□□□□□ -0.65
SF3B2-211ENST00000531041 CAMK2N2Q96S95 79 aa10.97□□□□□ -0.65
SF3B2-211ENST00000531041 TOMM7Q9P0U1 55 aa10.97□□□□□ -0.65
SF3B2-211ENST00000531041 C16orf90A8MZG2 172 aa10.96□□□□□ -0.65
SF3B2-211ENST00000531041 GCSHP23434 173 aa10.96□□□□□ -0.65
SF3B2-211ENST00000531041 C6orf226Q5I0X4 101 aa10.96□□□□□ -0.65
SF3B2-211ENST00000531041 COX7B2Q8TF08 81 aa10.95□□□□□ -0.66
SF3B2-211ENST00000531041 CARD19Q96LW7 228 aa10.95□□□□□ -0.66
SF3B2-211ENST00000531041 C20orf202A1L168 122 aa10.94□□□□□ -0.66
SF3B2-211ENST00000531041 NDUFA1O15239 70 aa10.94□□□□□ -0.66
SF3B2-211ENST00000531041 Q6ZRU5 148 aa10.94□□□□□ -0.66
SF3B2-211ENST00000531041 PKHD1P08F94 4074 aa10.94□□□□□ -0.66
SF3B2-211ENST00000531041 CKS1BP61024 79 aa10.93□□□□□ -0.66
SF3B2-211ENST00000531041 LINC01620Q4KN68 170 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 747.9 ms