RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 USP17L23D6RBM5 183 aa13.01□□□□□ -0.33
RPL38-205ENST00000530646 IGLV1-40P01703 118 aa13.01□□□□□ -0.33
RPL38-205ENST00000530646 BLCAPP62952 87 aa13.01□□□□□ -0.33
RPL38-205ENST00000530646 ZNF469Q96JG9 3925 aaPredicted RBP13.01□□□□□ -0.33
RPL38-205ENST00000530646 A0A087WYN8 130 aa13□□□□□ -0.33
RPL38-205ENST00000530646 IGHV4-61A0A0C4DH41 118 aa13□□□□□ -0.33
RPL38-205ENST00000530646 SYNJ2BPP57105 145 aa12.99□□□□□ -0.33
RPL38-205ENST00000530646 DGAT2L7PQ6IED9 249 aa12.99□□□□□ -0.33
RPL38-205ENST00000530646 OBSCN-AS1Q96MR7 158 aa12.99□□□□□ -0.33
RPL38-205ENST00000530646 NAV2Q8IVL1 2488 aa12.98□□□□□ -0.33
RPL38-205ENST00000530646 IGHV4-30-2A0A087WSY4 118 aa12.98□□□□□ -0.33
RPL38-205ENST00000530646 LINC00337Q8N6G1 96 aa12.98□□□□□ -0.33
RPL38-205ENST00000530646 PIMREGQ9BSJ6 248 aa12.98□□□□□ -0.33
RPL38-205ENST00000530646 TRAV13-2A0A0B4J235 113 aa12.97□□□□□ -0.33
RPL38-205ENST00000530646 APCP25054 2843 aa12.96□□□□□ -0.33
RPL38-205ENST00000530646 PF4P02776 101 aa12.96□□□□□ -0.34
RPL38-205ENST00000530646 IGKV2-28A0A075B6P5 120 aa12.95□□□□□ -0.34
RPL38-205ENST00000530646 IGKV2D-28P01615 120 aa12.95□□□□□ -0.34
RPL38-205ENST00000530646 CRPP02741 224 aa12.95□□□□□ -0.34
RPL38-205ENST00000530646 FAM19A3Q7Z5A8 133 aa12.95□□□□□ -0.34
RPL38-205ENST00000530646 IGHV3-53P01767 116 aa12.94□□□□□ -0.34
RPL38-205ENST00000530646 CFHR3Q02985 330 aa12.94□□□□□ -0.34
RPL38-205ENST00000530646 HELZ2Q9BYK8 2649 aaKnown RBP12.94□□□□□ -0.34
RPL38-205ENST00000530646 H3BUX3 64 aa12.94□□□□□ -0.34
RPL38-205ENST00000530646 KRTAP10-9P60411 292 aa12.94□□□□□ -0.34
RPL38-205ENST00000530646 MAPK1IP1LQ8NDC0 245 aa12.94□□□□□ -0.34
RPL38-205ENST00000530646 SMIM11BQ8TCY0 68 aa12.94□□□□□ -0.34
RPL38-205ENST00000530646 OVOL2Q9BRP0 275 aa12.94□□□□□ -0.34
RPL38-205ENST00000530646 A6NDX4 124 aa12.93□□□□□ -0.34
RPL38-205ENST00000530646 LINC00336Q6ZUF6 198 aa12.93□□□□□ -0.34
RPL38-205ENST00000530646 TLN2Q9Y4G6 2542 aa12.93□□□□□ -0.34
RPL38-205ENST00000530646 SORL1Q92673 2214 aa12.93□□□□□ -0.34
RPL38-205ENST00000530646 PFN2P35080 140 aa12.93□□□□□ -0.34
RPL38-205ENST00000530646 NCR3O14931 201 aa12.92□□□□□ -0.34
RPL38-205ENST00000530646 CCDC168Q8NDH2 2452 aa12.92□□□□□ -0.34
RPL38-205ENST00000530646 HILS1P60008 231 aa12.91□□□□□ -0.34
RPL38-205ENST00000530646 TEX15Q9BXT5 2789 aa12.91□□□□□ -0.34
RPL38-205ENST00000530646 Q96MF0 132 aa12.9□□□□□ -0.34
RPL38-205ENST00000530646 SND1-IT1Q9HBX3 110 aa12.9□□□□□ -0.34
RPL38-205ENST00000530646 MXRA5Q9NR99 2828 aa12.9□□□□□ -0.34
RPL38-205ENST00000530646 IGHV4-38-2P0DP08 117 aa12.89□□□□□ -0.35
RPL38-205ENST00000530646 PRO0628Q9UI54 55 aa12.89□□□□□ -0.35
RPL38-205ENST00000530646 EPM2AB3EWF7 344 aa12.89□□□□□ -0.35
RPL38-205ENST00000530646 J3QLI3 93 aa12.89□□□□□ -0.35
RPL38-205ENST00000530646 MIR7-3HGQ8N6C7 128 aa12.89□□□□□ -0.35
RPL38-205ENST00000530646 LECT2O14960 151 aa12.88□□□□□ -0.35
RPL38-205ENST00000530646 C10orf99Q6UWK7 81 aa12.88□□□□□ -0.35
RPL38-205ENST00000530646 KMT2BQ9UMN6 2715 aaPredicted RBP12.88□□□□□ -0.35
RPL38-205ENST00000530646 RBMY1BA6NDE4 496 aaKnown RBP12.87□□□□□ -0.35
RPL38-205ENST00000530646 RBMY1EA6NEQ0 496 aaKnown RBP12.87□□□□□ -0.35
RPL38-205ENST00000530646 RBMY1DP0C7P1 496 aaKnown RBP12.87□□□□□ -0.35
RPL38-205ENST00000530646 H0YGX0 51 aa12.87□□□□□ -0.35
RPL38-205ENST00000530646 SLPIP03973 132 aa12.87□□□□□ -0.35
RPL38-205ENST00000530646 NDUFC2-KCTD14E9PQ53 114 aa12.86□□□□□ -0.35
RPL38-205ENST00000530646 PSMB8P28062 276 aa12.86□□□□□ -0.35
RPL38-205ENST00000530646 CREBBPQ92793 2442 aa12.86□□□□□ -0.35
RPL38-205ENST00000530646 NDUFC2O95298 119 aa12.86□□□□□ -0.35
RPL38-205ENST00000530646 GHRHP01286 108 aa12.86□□□□□ -0.35
RPL38-205ENST00000530646 C11orf72Q8NBR9 251 aa12.86□□□□□ -0.35
RPL38-205ENST00000530646 AVPP01185 164 aa12.85□□□□□ -0.35
RPL38-205ENST00000530646 SS18Q15532 418 aa12.85□□□□□ -0.35
RPL38-205ENST00000530646 WFDC9Q8NEX5 89 aa12.85□□□□□ -0.35
RPL38-205ENST00000530646 TMEM243Q9BU79 118 aa12.84□□□□□ -0.35
RPL38-205ENST00000530646 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
RPL38-205ENST00000530646 NTM-AS1Q6ZSK4 140 aa12.84□□□□□ -0.35
RPL38-205ENST00000530646 ITPR2Q14571 2701 aa12.84□□□□□ -0.35
RPL38-205ENST00000530646 CCKP06307 115 aa12.83□□□□□ -0.36
RPL38-205ENST00000530646 FAM236DA0A1B0GTK5 79 aa12.83□□□□□ -0.36
RPL38-205ENST00000530646 FAM236CP0DP71 79 aa12.83□□□□□ -0.36
RPL38-205ENST00000530646 SONP18583 2426 aaKnown RBP12.82□□□□□ -0.36
RPL38-205ENST00000530646 TRAV23DV6A0A075B6W5 121 aa12.82□□□□□ -0.36
RPL38-205ENST00000530646 CCL18P55774 89 aa12.82□□□□□ -0.36
RPL38-205ENST00000530646 DEFB131AP59861 70 aa12.82□□□□□ -0.36
RPL38-205ENST00000530646 RPL36AP83881 106 aaKnown RBP12.82□□□□□ -0.36
RPL38-205ENST00000530646 C20orf197Q8N268 126 aa12.82□□□□□ -0.36
RPL38-205ENST00000530646 RPL36ALQ969Q0 106 aaKnown RBP12.82□□□□□ -0.36
RPL38-205ENST00000530646 A8MTW9 85 aa12.81□□□□□ -0.36
RPL38-205ENST00000530646 COX7B2Q8TF08 81 aa12.81□□□□□ -0.36
RPL38-205ENST00000530646 C1orf43Q9BWL3 253 aa12.81□□□□□ -0.36
RPL38-205ENST00000530646 C16orf95Q9H693 158 aa12.81□□□□□ -0.36
RPL38-205ENST00000530646 MSMBP08118 114 aa12.8□□□□□ -0.36
RPL38-205ENST00000530646 RPL35AP18077 110 aaKnown RBP12.8□□□□□ -0.36
RPL38-205ENST00000530646 FAM19A1Q7Z5A9 133 aa12.8□□□□□ -0.36
RPL38-205ENST00000530646 TMEM89A2RUT3 159 aa12.8□□□□□ -0.36
RPL38-205ENST00000530646 XCL1P47992 114 aa12.8□□□□□ -0.36
RPL38-205ENST00000530646 LINC00158P58513 81 aa12.8□□□□□ -0.36
RPL38-205ENST00000530646 XCL2Q9UBD3 114 aa12.8□□□□□ -0.36
RPL38-205ENST00000530646 ITPR3Q14573 2671 aa12.8□□□□□ -0.36
RPL38-205ENST00000530646 CUBNO60494 3623 aa12.79□□□□□ -0.36
RPL38-205ENST00000530646 GCN1Q92616 2671 aaKnown RBP12.79□□□□□ -0.36
RPL38-205ENST00000530646 F8WDY8 70 aa12.78□□□□□ -0.36
RPL38-205ENST00000530646 ORMDL1Q9P0S3 153 aa12.78□□□□□ -0.36
RPL38-205ENST00000530646 TOMM7Q9P0U1 55 aa12.78□□□□□ -0.36
RPL38-205ENST00000530646 SERP1Q9Y6X1 66 aa12.78□□□□□ -0.36
RPL38-205ENST00000530646 H7BZZ5 65 aa12.78□□□□□ -0.36
RPL38-205ENST00000530646 ENHOQ6UWT2 76 aa12.77□□□□□ -0.37
RPL38-205ENST00000530646 PKIGQ9Y2B9 76 aa12.77□□□□□ -0.37
RPL38-205ENST00000530646 ACANP16112 2415 aa12.77□□□□□ -0.37
RPL38-205ENST00000530646 S100A7L2Q5SY68 101 aa12.76□□□□□ -0.37
RPL38-205ENST00000530646 ATP5EP2Q5VTU8 51 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms