RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 SMIM1B2RUZ4 78 aa10.66□□□□□ -0.7
CCDC90B-213ENST00000529611 SRSF9Q13242 221 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC90B-213ENST00000529611 ZFAND6Q6FIF0 208 aa10.66□□□□□ -0.7
CCDC90B-213ENST00000529611 Q6ZTC4 211 aa10.66□□□□□ -0.7
CCDC90B-213ENST00000529611 NDUFA12Q9UI09 145 aa10.66□□□□□ -0.7
CCDC90B-213ENST00000529611 KPRPQ5T749 579 aaPredicted RBP10.65□□□□□ -0.7
CCDC90B-213ENST00000529611 SH2D6Q7Z4S9 175 aa10.65□□□□□ -0.7
CCDC90B-213ENST00000529611 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-213ENST00000529611 A0A0J9YXY3 114 aa10.65□□□□□ -0.71
CCDC90B-213ENST00000529611 K7ERJ3 54 aa10.64□□□□□ -0.71
CCDC90B-213ENST00000529611 SMIM13P0DJ93 91 aa10.64□□□□□ -0.71
CCDC90B-213ENST00000529611 RAB37Q96AX2 223 aa10.63□□□□□ -0.71
CCDC90B-213ENST00000529611 LINC00959A0A1B0GUT2 108 aa10.63□□□□□ -0.71
CCDC90B-213ENST00000529611 IGHV3-30P01768 117 aa10.63□□□□□ -0.71
CCDC90B-213ENST00000529611 IGHV3-30-5P0DP03 117 aa10.63□□□□□ -0.71
CCDC90B-213ENST00000529611 SPATA25Q9BR10 227 aa10.63□□□□□ -0.71
CCDC90B-213ENST00000529611 TM2D3Q9BRN9 247 aa10.63□□□□□ -0.71
CCDC90B-213ENST00000529611 HUWE1Q7Z6Z7 4374 aaKnown RBP10.62□□□□□ -0.71
CCDC90B-213ENST00000529611 C9orf118A6NHY6 69 aa10.62□□□□□ -0.71
CCDC90B-213ENST00000529611 H3BNG1 76 aa10.62□□□□□ -0.71
CCDC90B-213ENST00000529611 LELP1Q5T871 98 aa10.62□□□□□ -0.71
CCDC90B-213ENST00000529611 Q8N3U1 123 aa10.62□□□□□ -0.71
CCDC90B-213ENST00000529611 IGHV3OR16-9A0A0B4J2B5 98 aa10.61□□□□□ -0.71
CCDC90B-213ENST00000529611 NANOS2P60321 138 aaKnown RBP10.61□□□□□ -0.71
CCDC90B-213ENST00000529611 LITAFQ99732 161 aa10.61□□□□□ -0.71
CCDC90B-213ENST00000529611 A0A1B0GWB2 263 aa10.61□□□□□ -0.71
CCDC90B-213ENST00000529611 TMEM238C9JI98 176 aa10.61□□□□□ -0.71
CCDC90B-213ENST00000529611 NDUFA1O15239 70 aa10.61□□□□□ -0.71
CCDC90B-213ENST00000529611 DEFB121Q5J5C9 76 aa10.61□□□□□ -0.71
CCDC90B-213ENST00000529611 C11orf45Q8TAV5 145 aa10.61□□□□□ -0.71
CCDC90B-213ENST00000529611 CLPSL2Q6UWE3 100 aa10.6□□□□□ -0.71
CCDC90B-213ENST00000529611 MRAPQ8TCY5 172 aa10.6□□□□□ -0.71
CCDC90B-213ENST00000529611 TMEM238LA0A1B0GVL6 79 aa10.59□□□□□ -0.71
CCDC90B-213ENST00000529611 A6NJY4 79 aa10.59□□□□□ -0.71
CCDC90B-213ENST00000529611 LYPD5Q6UWN5 251 aa10.59□□□□□ -0.71
CCDC90B-213ENST00000529611 NAA38Q9BRA0 125 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-213ENST00000529611 H3BUT2 72 aa10.59□□□□□ -0.71
CCDC90B-213ENST00000529611 VAMP3Q15836 100 aa10.59□□□□□ -0.71
CCDC90B-213ENST00000529611 LINC00269Q8N2A0 174 aa10.58□□□□□ -0.72
CCDC90B-213ENST00000529611 Q9H8V8 135 aa10.58□□□□□ -0.72
CCDC90B-213ENST00000529611 A0A087WZ39 114 aa10.57□□□□□ -0.72
CCDC90B-213ENST00000529611 ANGP03950 147 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-213ENST00000529611 SS18Q15532 418 aa10.57□□□□□ -0.72
CCDC90B-213ENST00000529611 DEFB131BA0A096LNP1 70 aa10.57□□□□□ -0.72
CCDC90B-213ENST00000529611 CCL25O15444 150 aa10.57□□□□□ -0.72
CCDC90B-213ENST00000529611 ADAMTSL4-AS1Q5T5F5 129 aa10.57□□□□□ -0.72
CCDC90B-213ENST00000529611 ZNF625Q96I27 306 aaPredicted RBP10.57□□□□□ -0.72
CCDC90B-213ENST00000529611 XCL1P47992 114 aa10.56□□□□□ -0.72
CCDC90B-213ENST00000529611 C5orf38Q86SI9 138 aa10.56□□□□□ -0.72
CCDC90B-213ENST00000529611 TIMM17BO60830 172 aa10.56□□□□□ -0.72
CCDC90B-213ENST00000529611 UBE2V1Q13404 147 aa10.56□□□□□ -0.72
CCDC90B-213ENST00000529611 MUSTN1Q8IVN3 82 aa10.56□□□□□ -0.72
CCDC90B-213ENST00000529611 SPANXDQ9BXN6 97 aa10.56□□□□□ -0.72
CCDC90B-213ENST00000529611 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
CCDC90B-213ENST00000529611 REG3AQ06141 175 aa10.55□□□□□ -0.72
CCDC90B-213ENST00000529611 A0A1W2PPM0 123 aa10.54□□□□□ -0.72
CCDC90B-213ENST00000529611 COX7B2Q8TF08 81 aa10.54□□□□□ -0.72
CCDC90B-213ENST00000529611 A4D1N5 150 aa10.54□□□□□ -0.72
CCDC90B-213ENST00000529611 IGLL5B9A064 214 aa10.54□□□□□ -0.72
CCDC90B-213ENST00000529611 MIAQ16674 131 aa10.54□□□□□ -0.72
CCDC90B-213ENST00000529611 APOMO95445 188 aa10.53□□□□□ -0.72
CCDC90B-213ENST00000529611 CFC1BP0CG36 223 aa10.53□□□□□ -0.72
CCDC90B-213ENST00000529611 CFC1P0CG37 223 aa10.53□□□□□ -0.72
CCDC90B-213ENST00000529611 RPL24P83731 157 aaKnown RBP10.53□□□□□ -0.72
CCDC90B-213ENST00000529611 PRSS2P07478 247 aa10.52□□□□□ -0.72
CCDC90B-213ENST00000529611 CHCHD10Q8WYQ3 142 aaPredicted RBP10.52□□□□□ -0.72
CCDC90B-213ENST00000529611 TOMM7Q9P0U1 55 aa10.52□□□□□ -0.72
CCDC90B-213ENST00000529611 HERV-K104P63124 156 aa10.52□□□□□ -0.73
CCDC90B-213ENST00000529611 IGLV10-54A0A075B6I4 117 aa10.51□□□□□ -0.73
CCDC90B-213ENST00000529611 CD164L2Q6UWJ8 174 aa10.51□□□□□ -0.73
CCDC90B-213ENST00000529611 WFDC10BQ8IUB3 73 aa10.51□□□□□ -0.73
CCDC90B-213ENST00000529611 DAND5Q8N907 189 aa10.51□□□□□ -0.73
CCDC90B-213ENST00000529611 PRR34Q9NV39 138 aa10.51□□□□□ -0.73
CCDC90B-213ENST00000529611 EIF4EBP3O60516 100 aaPredicted RBP10.5□□□□□ -0.73
CCDC90B-213ENST00000529611 CIRBPQ14011 172 aaKnown RBP10.5□□□□□ -0.73
CCDC90B-213ENST00000529611 ESRGQ1W209 222 aa10.5□□□□□ -0.73
CCDC90B-213ENST00000529611 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
CCDC90B-213ENST00000529611 KLK12Q9UKR0 248 aa10.5□□□□□ -0.73
CCDC90B-213ENST00000529611 DNAH9Q9NYC9 4486 aa10.5□□□□□ -0.73
CCDC90B-213ENST00000529611 FABP2P12104 132 aa10.5□□□□□ -0.73
CCDC90B-213ENST00000529611 NPC2P61916 151 aa10.5□□□□□ -0.73
CCDC90B-213ENST00000529611 LINC01561Q8N1V8 128 aa10.5□□□□□ -0.73
CCDC90B-213ENST00000529611 TRAV10A0A0B4J240 114 aa10.49□□□□□ -0.73
CCDC90B-213ENST00000529611 IGHV3-33P01772 117 aa10.49□□□□□ -0.73
CCDC90B-213ENST00000529611 A0A0U1RRA0 63 aa10.48□□□□□ -0.73
CCDC90B-213ENST00000529611 GAGE10A6NGK3 116 aa10.48□□□□□ -0.73
CCDC90B-213ENST00000529611 MEIG1Q5JSS6 88 aa10.48□□□□□ -0.73
CCDC90B-213ENST00000529611 A0A0B4J2C4 111 aa10.48□□□□□ -0.73
CCDC90B-213ENST00000529611 K7EP34 96 aa10.48□□□□□ -0.73
CCDC90B-213ENST00000529611 COX7A2LO14548 114 aa10.48□□□□□ -0.73
CCDC90B-213ENST00000529611 TSPAN13O95857 204 aa10.48□□□□□ -0.73
CCDC90B-213ENST00000529611 IFITM1P13164 125 aa10.48□□□□□ -0.73
CCDC90B-213ENST00000529611 ENHOQ6UWT2 76 aa10.48□□□□□ -0.73
CCDC90B-213ENST00000529611 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.47□□□□□ -0.73
CCDC90B-213ENST00000529611 PRO1854Q9UHT4 67 aa10.47□□□□□ -0.73
CCDC90B-213ENST00000529611 SPCS1Q9Y6A9 102 aa10.47□□□□□ -0.73
CCDC90B-213ENST00000529611 FOXI1Q12951 378 aa10.46□□□□□ -0.73
CCDC90B-213ENST00000529611 GTF2H5Q6ZYL4 71 aa10.46□□□□□ -0.73
CCDC90B-213ENST00000529611 Q8IZM0 81 aa10.46□□□□□ -0.73
CCDC90B-213ENST00000529611 STAB2Q8WWQ8 2551 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms