RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 PKIGQ9Y2B9 76 aa4.49□□□□□ -1.69
ITGB1-218ENST00000528877 SMKR1H3BMG3 65 aa4.48□□□□□ -1.69
ITGB1-218ENST00000528877 OXTP01178 125 aa4.48□□□□□ -1.69
ITGB1-218ENST00000528877 PNRC1Q12796 327 aaPredicted RBP4.48□□□□□ -1.69
ITGB1-218ENST00000528877 CD164L2Q6UWJ8 174 aa4.48□□□□□ -1.69
ITGB1-218ENST00000528877 ZNF664Q8N3J9 261 aa4.48□□□□□ -1.69
ITGB1-218ENST00000528877 PLAC8Q9NZF1 115 aa4.48□□□□□ -1.69
ITGB1-218ENST00000528877 UBE2D4Q9Y2X8 147 aa4.48□□□□□ -1.69
ITGB1-218ENST00000528877 IGHV1-58A0A0C4DH39 117 aa4.47□□□□□ -1.69
ITGB1-218ENST00000528877 IGKV3OR2-268A0A0C4DH90 116 aa4.47□□□□□ -1.69
ITGB1-218ENST00000528877 F8W036 122 aa4.47□□□□□ -1.69
ITGB1-218ENST00000528877 PPBPP02775 128 aa4.47□□□□□ -1.69
ITGB1-218ENST00000528877 FCER1GP30273 86 aa4.47□□□□□ -1.69
ITGB1-218ENST00000528877 XCL1P47992 114 aa4.47□□□□□ -1.69
ITGB1-218ENST00000528877 CAMPP49913 170 aa4.47□□□□□ -1.69
ITGB1-218ENST00000528877 HIGD2BQ4VC39 106 aa4.47□□□□□ -1.69
ITGB1-218ENST00000528877 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
ITGB1-218ENST00000528877 SMIM2Q9BVW6 85 aa4.47□□□□□ -1.69
ITGB1-218ENST00000528877 A0A087WYN8 130 aa4.46□□□□□ -1.7
ITGB1-218ENST00000528877 C1orf196B1AJZ1 125 aa4.46□□□□□ -1.7
ITGB1-218ENST00000528877 D6R8Y8 96 aa4.46□□□□□ -1.7
ITGB1-218ENST00000528877 TNFRSF6BO95407 300 aa4.46□□□□□ -1.7
ITGB1-218ENST00000528877 CKS2P33552 79 aa4.46□□□□□ -1.7
ITGB1-218ENST00000528877 SS18Q15532 418 aa4.46□□□□□ -1.7
ITGB1-218ENST00000528877 TMEM18Q96B42 140 aa4.46□□□□□ -1.7
ITGB1-218ENST00000528877 SPANXA1Q9NS26 97 aa4.46□□□□□ -1.7
ITGB1-218ENST00000528877 LINC00474Q9P2X8 69 aa4.46□□□□□ -1.7
ITGB1-218ENST00000528877 PRSS47A8MTI9 375 aa4.45□□□□□ -1.7
ITGB1-218ENST00000528877 COX7A2LO14548 114 aa4.45□□□□□ -1.7
ITGB1-218ENST00000528877 NPYP01303 97 aa4.45□□□□□ -1.7
ITGB1-218ENST00000528877 CHTF8P0CG12 524 aa4.45□□□□□ -1.7
ITGB1-218ENST00000528877 HNRNPA3P51991 378 aaKnown RBP4.45□□□□□ -1.7
ITGB1-218ENST00000528877 MRPS36P82909 103 aaKnown RBP4.45□□□□□ -1.7
ITGB1-218ENST00000528877 COX6A2Q02221 97 aa4.45□□□□□ -1.7
ITGB1-218ENST00000528877 MRPL54Q6P161 138 aaKnown RBP4.45□□□□□ -1.7
ITGB1-218ENST00000528877 Q6ZUT4 128 aa4.45□□□□□ -1.7
ITGB1-218ENST00000528877 ORMDL3Q8N138 153 aa4.45□□□□□ -1.7
ITGB1-218ENST00000528877 FAM104AQ969W3 186 aa4.45□□□□□ -1.7
ITGB1-218ENST00000528877 CARD19Q96LW7 228 aa4.45□□□□□ -1.7
ITGB1-218ENST00000528877 LAMTOR2Q9Y2Q5 125 aa4.45□□□□□ -1.7
ITGB1-218ENST00000528877 A0A096LNI7 61 aa4.44□□□□□ -1.7
ITGB1-218ENST00000528877 CLLU1Q5K131 121 aa4.44□□□□□ -1.7
ITGB1-218ENST00000528877 OR10D4PQ8NGN7 298 aa4.44□□□□□ -1.7
ITGB1-218ENST00000528877 TNXBP22105 4242 aa4.43□□□□□ -1.7
ITGB1-218ENST00000528877 F8WDY8 70 aa4.43□□□□□ -1.7
ITGB1-218ENST00000528877 MT-ND4LP03901 98 aa4.43□□□□□ -1.7
ITGB1-218ENST00000528877 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-218ENST00000528877 RAB14P61106 215 aa4.43□□□□□ -1.7
ITGB1-218ENST00000528877 RPL39P62891 51 aaKnown RBP4.43□□□□□ -1.7
ITGB1-218ENST00000528877 SYCNQ0VAF6 134 aa4.43□□□□□ -1.7
ITGB1-218ENST00000528877 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
ITGB1-218ENST00000528877 Q6ZRU5 148 aa4.43□□□□□ -1.7
ITGB1-218ENST00000528877 C7orf33Q8WU49 177 aa4.43□□□□□ -1.7
ITGB1-218ENST00000528877 C2orf48Q96LS8 159 aa4.43□□□□□ -1.7
ITGB1-218ENST00000528877 IMMP2LQ96T52 175 aa4.43□□□□□ -1.7
ITGB1-218ENST00000528877 PYGO1Q9Y3Y4 419 aa4.43□□□□□ -1.7
ITGB1-218ENST00000528877 IGLV4-69A0A075B6H9 119 aa4.42□□□□□ -1.7
ITGB1-218ENST00000528877 TRAV13-1A0A0B4J241 112 aa4.42□□□□□ -1.7
ITGB1-218ENST00000528877 IGHV3OR16-9A0A0B4J2B5 98 aa4.42□□□□□ -1.7
ITGB1-218ENST00000528877 K7EMI3 77 aa4.42□□□□□ -1.7
ITGB1-218ENST00000528877 PRR3P79522 188 aaKnown RBP4.42□□□□□ -1.7
ITGB1-218ENST00000528877 MAJINQ3KP22 176 aa4.42□□□□□ -1.7
ITGB1-218ENST00000528877 RNASE13Q5GAN3 156 aaKnown RBP4.42□□□□□ -1.7
ITGB1-218ENST00000528877 UQCC3Q6UW78 93 aa4.42□□□□□ -1.7
ITGB1-218ENST00000528877 TMEM136Q6ZRR5 245 aa4.42□□□□□ -1.7
ITGB1-218ENST00000528877 PRELID3AQ96N28 172 aa4.42□□□□□ -1.7
ITGB1-218ENST00000528877 IGLV4-3A0A075B6K6 122 aa4.41□□□□□ -1.7
ITGB1-218ENST00000528877 TRAV9-1A0A075B6T8 112 aa4.41□□□□□ -1.7
ITGB1-218ENST00000528877 IGKV2-24A0A0C4DH68 120 aa4.41□□□□□ -1.7
ITGB1-218ENST00000528877 LOC107984640A0A0U1RRK4 108 aa4.41□□□□□ -1.7
ITGB1-218ENST00000528877 IFITM10A6NMD0 228 aa4.41□□□□□ -1.7
ITGB1-218ENST00000528877 APOMO95445 188 aa4.41□□□□□ -1.7
ITGB1-218ENST00000528877 ADCYAP1P18509 176 aa4.41□□□□□ -1.7
ITGB1-218ENST00000528877 IFI27P40305 119 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-218ENST00000528877 SPAG11BQ08648 103 aa4.41□□□□□ -1.7
ITGB1-218ENST00000528877 STPG4Q8N801 248 aa4.41□□□□□ -1.7
ITGB1-218ENST00000528877 LINC00526Q96FQ7 95 aa4.41□□□□□ -1.7
ITGB1-218ENST00000528877 MAP1LC3AQ9H492 121 aa4.41□□□□□ -1.7
ITGB1-218ENST00000528877 A0A087WZ39 114 aa4.4□□□□□ -1.71
ITGB1-218ENST00000528877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-218ENST00000528877 MT1HL1P0DM35 61 aa4.4□□□□□ -1.71
ITGB1-218ENST00000528877 RAB5AP20339 215 aa4.4□□□□□ -1.71
ITGB1-218ENST00000528877 SERTAD4-AS1Q5TG53 156 aa4.4□□□□□ -1.71
ITGB1-218ENST00000528877 CAMK2N2Q96S95 79 aa4.4□□□□□ -1.71
ITGB1-218ENST00000528877 MRPL35Q9NZE8 188 aaKnown RBP4.4□□□□□ -1.71
ITGB1-218ENST00000528877 TGIF2-C20orf24A0A0A6YYL0 155 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 TMEM218A2RU14 115 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 TLX1NBP0CAT3 122 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 IFITM2Q01629 132 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 ORMDL2Q53FV1 153 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 LINC00242Q5T6M2 205 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 LINC00173Q6ZV60 143 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 FAM19A3Q7Z5A8 133 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 C5orf38Q86SI9 138 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 LINC01561Q8N1V8 128 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 Q8N8P6 123 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 DPH3Q96FX2 82 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 TMEM141Q96I45 108 aa4.39□□□□□ -1.71
ITGB1-218ENST00000528877 OPRPNQ99935 248 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-218ENST00000528877 CTDSP1Q9GZU7 261 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms