RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 RPL28P46779 137 aaKnown RBP6.12□□□□□ -1.43
CTNND1-219ENST00000528621 FAM19A3Q7Z5A8 133 aa6.12□□□□□ -1.43
CTNND1-219ENST00000528621 POM121L12Q8N7R1 296 aa6.12□□□□□ -1.43
CTNND1-219ENST00000528621 SERP1Q9Y6X1 66 aa6.12□□□□□ -1.43
CTNND1-219ENST00000528621 ADAMTS20P59510 1910 aa6.12□□□□□ -1.43
CTNND1-219ENST00000528621 M0QXV9 152 aa6.12□□□□□ -1.43
CTNND1-219ENST00000528621 AMELXQ99217 191 aa6.12□□□□□ -1.43
CTNND1-219ENST00000528621 GPR179Q6PRD1 2367 aa6.12□□□□□ -1.43
CTNND1-219ENST00000528621 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
CTNND1-219ENST00000528621 SMR3AQ99954 134 aa6.12□□□□□ -1.43
CTNND1-219ENST00000528621 CADP27708 2225 aa6.12□□□□□ -1.43
CTNND1-219ENST00000528621 WFDC13Q8IUB5 93 aa6.12□□□□□ -1.43
CTNND1-219ENST00000528621 SPTBN2O15020 2390 aa6.11□□□□□ -1.43
CTNND1-219ENST00000528621 COX6A2Q02221 97 aa6.11□□□□□ -1.43
CTNND1-219ENST00000528621 FHL2Q14192 279 aa6.11□□□□□ -1.43
CTNND1-219ENST00000528621 OXLD1Q5BKU9 147 aa6.11□□□□□ -1.43
CTNND1-219ENST00000528621 FAM30AQ9NZY2 134 aa6.11□□□□□ -1.43
CTNND1-219ENST00000528621 SMIM1B2RUZ4 78 aa6.11□□□□□ -1.43
CTNND1-219ENST00000528621 RETNQ9HD89 108 aa6.11□□□□□ -1.43
CTNND1-219ENST00000528621 TECTAO75443 2155 aa6.11□□□□□ -1.43
CTNND1-219ENST00000528621 Q8N814 137 aa6.11□□□□□ -1.43
CTNND1-219ENST00000528621 PCDH15Q96QU1 1955 aa6.11□□□□□ -1.43
CTNND1-219ENST00000528621 MED13Q9UHV7 2174 aa6.11□□□□□ -1.43
CTNND1-219ENST00000528621 COX7CP15954 63 aa6.1□□□□□ -1.43
CTNND1-219ENST00000528621 LINC00310P59036 64 aa6.1□□□□□ -1.43
CTNND1-219ENST00000528621 C2orf48Q96LS8 159 aa6.1□□□□□ -1.43
CTNND1-219ENST00000528621 SNURFQ9Y675 71 aa6.1□□□□□ -1.43
CTNND1-219ENST00000528621 KRTAP10-9P60411 292 aa6.1□□□□□ -1.43
CTNND1-219ENST00000528621 A0A1B0GUV1 79 aa6.1□□□□□ -1.43
CTNND1-219ENST00000528621 URB1-AS1Q96HZ7 61 aa6.09□□□□□ -1.43
CTNND1-219ENST00000528621 KIAA1549Q9HCM3 1950 aa6.09□□□□□ -1.43
CTNND1-219ENST00000528621 PRYO14603 147 aa6.09□□□□□ -1.43
CTNND1-219ENST00000528621 CACNA1GO43497 2377 aa6.09□□□□□ -1.43
CTNND1-219ENST00000528621 LINC01546A6NGU7 62 aa6.09□□□□□ -1.43
CTNND1-219ENST00000528621 IGLV5-52A0A0A0MRZ9 124 aa6.09□□□□□ -1.44
CTNND1-219ENST00000528621 USF3Q68DE3 2245 aa6.09□□□□□ -1.44
CTNND1-219ENST00000528621 ARFGEF3Q5TH69 2177 aa6.08□□□□□ -1.44
CTNND1-219ENST00000528621 RAI1Q7Z5J4 1906 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-219ENST00000528621 NCOA6Q14686 2063 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-219ENST00000528621 UNQ6190/PRO20217Q6UXQ8 127 aa6.08□□□□□ -1.44
CTNND1-219ENST00000528621 NTM-AS1Q6ZSK4 140 aa6.08□□□□□ -1.44
CTNND1-219ENST00000528621 ZGRF1Q86YA3 2104 aa6.08□□□□□ -1.44
CTNND1-219ENST00000528621 Q8N2B8 174 aa6.07□□□□□ -1.44
CTNND1-219ENST00000528621 CACNA1HO95180 2353 aa6.07□□□□□ -1.44
CTNND1-219ENST00000528621 MED12LQ86YW9 2145 aa6.07□□□□□ -1.44
CTNND1-219ENST00000528621 IGLV4-60A0A075B6I1 120 aa6.07□□□□□ -1.44
CTNND1-219ENST00000528621 TRAV7A0A075B6U4 112 aa6.07□□□□□ -1.44
CTNND1-219ENST00000528621 A0A087WYN8 130 aa6.07□□□□□ -1.44
CTNND1-219ENST00000528621 NACAE9PAV3 2078 aa6.07□□□□□ -1.44
CTNND1-219ENST00000528621 TRBV10-3A0A0K0K1G6 114 aa6.07□□□□□ -1.44
CTNND1-219ENST00000528621 PCNX3Q9H6A9 2034 aa6.06□□□□□ -1.44
CTNND1-219ENST00000528621 Q8N9L7 120 aa6.06□□□□□ -1.44
CTNND1-219ENST00000528621 LINC00694P0DN24 101 aa6.06□□□□□ -1.44
CTNND1-219ENST00000528621 C9orf116Q5BN46 136 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-219ENST00000528621 C6orf223Q8N319 242 aa6.06□□□□□ -1.44
CTNND1-219ENST00000528621 TSPEAR-AS2P59090 65 aa6.06□□□□□ -1.44
CTNND1-219ENST00000528621 ESRGQ1W209 222 aa6.05□□□□□ -1.44
CTNND1-219ENST00000528621 Q6ZTC4 211 aa6.05□□□□□ -1.44
CTNND1-219ENST00000528621 COL6A6A6NMZ7 2263 aa6.05□□□□□ -1.44
CTNND1-219ENST00000528621 PCNX2A6NKB5 2137 aa6.05□□□□□ -1.44
CTNND1-219ENST00000528621 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
CTNND1-219ENST00000528621 Q6ZSN1 163 aa6.04□□□□□ -1.44
CTNND1-219ENST00000528621 CCDC179H3BU77 68 aa6.04□□□□□ -1.44
CTNND1-219ENST00000528621 NHLRC4P0CG21 123 aaPredicted RBP6.04□□□□□ -1.44
CTNND1-219ENST00000528621 CIRBP-AS1Q8TBR5 109 aa6.04□□□□□ -1.44
CTNND1-219ENST00000528621 LYPD5Q6UWN5 251 aa6.04□□□□□ -1.44
CTNND1-219ENST00000528621 XGP55808 180 aa6.03□□□□□ -1.44
CTNND1-219ENST00000528621 ACACAQ13085 2346 aa6.03□□□□□ -1.44
CTNND1-219ENST00000528621 FREM1Q5H8C1 2179 aa6.03□□□□□ -1.44
CTNND1-219ENST00000528621 LINC00337Q8N6G1 96 aa6.03□□□□□ -1.44
CTNND1-219ENST00000528621 CREBBPQ92793 2442 aa6.03□□□□□ -1.44
CTNND1-219ENST00000528621 Q9BRP9 147 aa6.03□□□□□ -1.44
CTNND1-219ENST00000528621 ADAMTSL4-AS1Q5T5F5 129 aa6.02□□□□□ -1.45
CTNND1-219ENST00000528621 SPTAN1Q13813 2472 aaKnown RBP6.02□□□□□ -1.45
CTNND1-219ENST00000528621 A0A1W2PPR1 153 aa6.02□□□□□ -1.45
CTNND1-219ENST00000528621 Q6ZVQ6 151 aa6.02□□□□□ -1.45
CTNND1-219ENST00000528621 CACNA1BQ00975 2339 aa6.02□□□□□ -1.45
CTNND1-219ENST00000528621 C1orf134Q5TEV5 83 aa6.02□□□□□ -1.45
CTNND1-219ENST00000528621 EXPH5Q8NEV8 1989 aa6.02□□□□□ -1.45
CTNND1-219ENST00000528621 DSCAMO60469 2012 aa6.02□□□□□ -1.45
CTNND1-219ENST00000528621 PRR3P79522 188 aaKnown RBP6.01□□□□□ -1.45
CTNND1-219ENST00000528621 ABCA4P78363 2273 aa6.01□□□□□ -1.45
CTNND1-219ENST00000528621 NBASA2RRP1 2371 aa6.01□□□□□ -1.45
CTNND1-219ENST00000528621 LINC01556Q5JQF7 62 aa6.01□□□□□ -1.45
CTNND1-219ENST00000528621 A6NED7 52 aa6.01□□□□□ -1.45
CTNND1-219ENST00000528621 FAM19A4Q96LR4 140 aa6.01□□□□□ -1.45
CTNND1-219ENST00000528621 PCNX1Q96RV3 2341 aa6.01□□□□□ -1.45
CTNND1-219ENST00000528621 NOTCH3Q9UM47 2321 aa6.01□□□□□ -1.45
CTNND1-219ENST00000528621 MED13LQ71F56 2210 aa6.01□□□□□ -1.45
CTNND1-219ENST00000528621 IGHV6-1A0A0B4J1U7 121 aa6.01□□□□□ -1.45
CTNND1-219ENST00000528621 DOPEY2Q9Y3R5 2298 aa6.01□□□□□ -1.45
CTNND1-219ENST00000528621 A0A096LNJ9 63 aa6□□□□□ -1.45
CTNND1-219ENST00000528621 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
CTNND1-219ENST00000528621 LINC00575Q6W349 94 aa6□□□□□ -1.45
CTNND1-219ENST00000528621 COL4A2P08572 1712 aa6□□□□□ -1.45
CTNND1-219ENST00000528621 PRR4Q16378 134 aa6□□□□□ -1.45
CTNND1-219ENST00000528621 A0A0U1RQV1 116 aa5.99□□□□□ -1.45
CTNND1-219ENST00000528621 CELA1Q9UNI1 258 aa5.99□□□□□ -1.45
CTNND1-219ENST00000528621 LIMD2Q9BT23 127 aa5.99□□□□□ -1.45
CTNND1-219ENST00000528621 RIF1Q5UIP0 2472 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms