RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 Q5BKY6 102 aa4.67□□□□□ -1.66
USP48-212ENST00000527823 LYZL1Q6UWQ5 148 aa4.67□□□□□ -1.66
USP48-212ENST00000527823 TMEM101Q96IK0 257 aa4.67□□□□□ -1.66
USP48-212ENST00000527823 KRTAP4-1Q9BYQ7 146 aa4.67□□□□□ -1.66
USP48-212ENST00000527823 CDC42SE2Q9NRR3 84 aa4.67□□□□□ -1.66
USP48-212ENST00000527823 IGLV9-49A0A0B4J1Y8 123 aa4.66□□□□□ -1.66
USP48-212ENST00000527823 G3V3Q6 166 aa4.66□□□□□ -1.66
USP48-212ENST00000527823 UPK1BO75841 260 aa4.66□□□□□ -1.66
USP48-212ENST00000527823 MT3P25713 68 aa4.66□□□□□ -1.66
USP48-212ENST00000527823 RPL35P42766 123 aaKnown RBP4.66□□□□□ -1.66
USP48-212ENST00000527823 RPS20P60866 119 aaKnown RBP4.66□□□□□ -1.66
USP48-212ENST00000527823 CENPWQ5EE01 88 aa4.66□□□□□ -1.66
USP48-212ENST00000527823 MRPL52Q86TS9 123 aaKnown RBP4.66□□□□□ -1.66
USP48-212ENST00000527823 MRAP2Q96G30 205 aa4.66□□□□□ -1.66
USP48-212ENST00000527823 CNFNQ9BYD5 112 aa4.66□□□□□ -1.66
USP48-212ENST00000527823 TMEM242Q9NWH2 141 aa4.66□□□□□ -1.66
USP48-212ENST00000527823 MRPL35Q9NZE8 188 aaKnown RBP4.66□□□□□ -1.66
USP48-212ENST00000527823 BORCS7-ASMTA0A0B4J1R7 106 aa4.65□□□□□ -1.67
USP48-212ENST00000527823 A0A1B0GV50 99 aa4.65□□□□□ -1.67
USP48-212ENST00000527823 ZNF861PO60384 105 aa4.65□□□□□ -1.67
USP48-212ENST00000527823 PFDN1O60925 122 aa4.65□□□□□ -1.67
USP48-212ENST00000527823 TLX1NBP0CAT3 122 aa4.65□□□□□ -1.67
USP48-212ENST00000527823 KIAA1644Q3SXP7 199 aa4.65□□□□□ -1.67
USP48-212ENST00000527823 RNASE13Q5GAN3 156 aaKnown RBP4.65□□□□□ -1.67
USP48-212ENST00000527823 C5orf38Q86SI9 138 aa4.65□□□□□ -1.67
USP48-212ENST00000527823 RNASE7Q9H1E1 156 aaKnown RBP4.65□□□□□ -1.67
USP48-212ENST00000527823 SMDT1Q9H4I9 107 aa4.65□□□□□ -1.67
USP48-212ENST00000527823 C6orf48Q9UBA6 75 aa4.65□□□□□ -1.67
USP48-212ENST00000527823 IGLV7-46A0A075B6I9 117 aa4.64□□□□□ -1.67
USP48-212ENST00000527823 F2Z2F3 143 aa4.64□□□□□ -1.67
USP48-212ENST00000527823 FOXA3P55318 350 aaPredicted RBP4.64□□□□□ -1.67
USP48-212ENST00000527823 KRTAP13-2Q52LG2 175 aa4.64□□□□□ -1.67
USP48-212ENST00000527823 TYMSOSQ8TAI1 123 aa4.64□□□□□ -1.67
USP48-212ENST00000527823 C11orf52Q96A22 123 aa4.64□□□□□ -1.67
USP48-212ENST00000527823 TRBV20OR9-2A0A075B6H5 130 aa4.63□□□□□ -1.67
USP48-212ENST00000527823 TRBV6-5A0A0K0K1A5 114 aa4.63□□□□□ -1.67
USP48-212ENST00000527823 C7orf77A4D0Y5 90 aa4.63□□□□□ -1.67
USP48-212ENST00000527823 I3L3M4 83 aa4.63□□□□□ -1.67
USP48-212ENST00000527823 CRYGAP11844 174 aa4.63□□□□□ -1.67
USP48-212ENST00000527823 C9orf129Q5T035 196 aaKnown RBP4.63□□□□□ -1.67
USP48-212ENST00000527823 Q6ZUT4 128 aa4.63□□□□□ -1.67
USP48-212ENST00000527823 TMUB2Q71RG4 321 aa4.63□□□□□ -1.67
USP48-212ENST00000527823 OR10D4PQ8NGN7 298 aa4.63□□□□□ -1.67
USP48-212ENST00000527823 ORAOV1Q8WV07 137 aa4.63□□□□□ -1.67
USP48-212ENST00000527823 IMMP2LQ96T52 175 aa4.63□□□□□ -1.67
USP48-212ENST00000527823 ALG5Q9Y673 324 aa4.63□□□□□ -1.67
USP48-212ENST00000527823 FXYD6-FXYD2A0A087WZ82 144 aa4.62□□□□□ -1.67
USP48-212ENST00000527823 TRAV13-1A0A0B4J241 112 aa4.62□□□□□ -1.67
USP48-212ENST00000527823 C1orf196B1AJZ1 125 aa4.62□□□□□ -1.67
USP48-212ENST00000527823 NDUFA1O15239 70 aa4.62□□□□□ -1.67
USP48-212ENST00000527823 IFNA1P01562 189 aa4.62□□□□□ -1.67
USP48-212ENST00000527823 PMCHP20382 165 aa4.62□□□□□ -1.67
USP48-212ENST00000527823 LINC00173Q6ZV60 143 aa4.62□□□□□ -1.67
USP48-212ENST00000527823 C9orf62Q8N4C0 152 aa4.62□□□□□ -1.67
USP48-212ENST00000527823 LITAFQ99732 161 aa4.62□□□□□ -1.67
USP48-212ENST00000527823 CYTL1Q9NRR1 136 aa4.62□□□□□ -1.67
USP48-212ENST00000527823 XKRY2A2RUG3 117 aa4.61□□□□□ -1.67
USP48-212ENST00000527823 UNQ6190/PRO20217Q6UXQ8 127 aa4.61□□□□□ -1.67
USP48-212ENST00000527823 LINC00299Q6ZSB3 139 aa4.61□□□□□ -1.67
USP48-212ENST00000527823 LINC00304Q8N9R0 145 aa4.61□□□□□ -1.67
USP48-212ENST00000527823 FAM213BQ8TBF2 198 aa4.61□□□□□ -1.67
USP48-212ENST00000527823 SFT2D1Q8WV19 159 aa4.61□□□□□ -1.67
USP48-212ENST00000527823 MBD3L1Q8WWY6 194 aa4.61□□□□□ -1.67
USP48-212ENST00000527823 S100ZQ8WXG8 99 aa4.61□□□□□ -1.67
USP48-212ENST00000527823 ANAPC11Q9NYG5 84 aa4.61□□□□□ -1.67
USP48-212ENST00000527823 UBE2D4Q9Y2X8 147 aa4.61□□□□□ -1.67
USP48-212ENST00000527823 RAB19A4D1S5 217 aa4.6□□□□□ -1.67
USP48-212ENST00000527823 NUPR1O60356 82 aa4.6□□□□□ -1.67
USP48-212ENST00000527823 ASB16-AS1Q495Z4 193 aa4.6□□□□□ -1.67
USP48-212ENST00000527823 KCNRGQ8N5I3 272 aa4.6□□□□□ -1.67
USP48-212ENST00000527823 SMIM12Q96EX1 92 aa4.6□□□□□ -1.67
USP48-212ENST00000527823 PPDPFQ9H3Y8 114 aa4.6□□□□□ -1.67
USP48-212ENST00000527823 IGHV3OR16-9A0A0B4J2B5 98 aa4.59□□□□□ -1.67
USP48-212ENST00000527823 TRBV27A0A0K0K1C4 114 aa4.59□□□□□ -1.67
USP48-212ENST00000527823 GIPP09681 153 aaPredicted RBP4.59□□□□□ -1.67
USP48-212ENST00000527823 GNG4P50150 75 aa4.59□□□□□ -1.67
USP48-212ENST00000527823 POLR2KP53803 58 aaKnown RBP4.59□□□□□ -1.67
USP48-212ENST00000527823 CCL20P78556 96 aa4.59□□□□□ -1.67
USP48-212ENST00000527823 TEX261Q6UWH6 196 aa4.59□□□□□ -1.67
USP48-212ENST00000527823 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
USP48-212ENST00000527823 CSDC2Q9Y534 153 aaKnown RBP4.59□□□□□ -1.67
USP48-212ENST00000527823 NDUFC2-KCTD14E9PQ53 114 aa4.58□□□□□ -1.68
USP48-212ENST00000527823 F8WDY8 70 aa4.58□□□□□ -1.68
USP48-212ENST00000527823 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
USP48-212ENST00000527823 LINC00242Q5T6M2 205 aa4.58□□□□□ -1.68
USP48-212ENST00000527823 NOTCH2NLQ7Z3S9 236 aa4.58□□□□□ -1.68
USP48-212ENST00000527823 FAM104AQ969W3 186 aa4.58□□□□□ -1.68
USP48-212ENST00000527823 ST20Q9HBF5 79 aa4.58□□□□□ -1.68
USP48-212ENST00000527823 ARPC5O15511 151 aa4.57□□□□□ -1.68
USP48-212ENST00000527823 BCE1O60756 84 aa4.57□□□□□ -1.68
USP48-212ENST00000527823 RPL28P46779 137 aaKnown RBP4.57□□□□□ -1.68
USP48-212ENST00000527823 MT1HP80294 61 aa4.57□□□□□ -1.68
USP48-212ENST00000527823 KIAA0087Q14695 138 aa4.57□□□□□ -1.68
USP48-212ENST00000527823 TMEM241Q24JQ0 296 aa4.57□□□□□ -1.68
USP48-212ENST00000527823 KRTAP13-3Q3SY46 172 aa4.57□□□□□ -1.68
USP48-212ENST00000527823 C2orf82Q6UX34 121 aa4.57□□□□□ -1.68
USP48-212ENST00000527823 MANBALQ9NQG1 85 aa4.57□□□□□ -1.68
USP48-212ENST00000527823 GNG13Q9P2W3 67 aa4.57□□□□□ -1.68
USP48-212ENST00000527823 TRBV30A0A0K0K1B3 111 aa4.56□□□□□ -1.68
USP48-212ENST00000527823 K7EN84 100 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms