RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 ZNF843Q8N446 348 aa5.4□□□□□ -1.55
SOX6-208ENST00000527619 Q9HAA7 133 aa5.4□□□□□ -1.55
SOX6-208ENST00000527619 KMT2BQ9UMN6 2715 aaPredicted RBP5.39□□□□□ -1.55
SOX6-208ENST00000527619 WNK2Q9Y3S1 2297 aa5.39□□□□□ -1.55
SOX6-208ENST00000527619 FAM208BQ5VWN6 2430 aa5.39□□□□□ -1.55
SOX6-208ENST00000527619 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
SOX6-208ENST00000527619 FAM229BQ4G0N7 80 aa5.39□□□□□ -1.55
SOX6-208ENST00000527619 OVOL2Q9BRP0 275 aa5.39□□□□□ -1.55
SOX6-208ENST00000527619 LINC00846Q9NV44 126 aa5.39□□□□□ -1.55
SOX6-208ENST00000527619 TACC2O95359 2948 aa5.39□□□□□ -1.55
SOX6-208ENST00000527619 TMEM256-PLSCR3K7ERE1 68 aa5.39□□□□□ -1.55
SOX6-208ENST00000527619 NDUFA4O00483 81 aa5.39□□□□□ -1.55
SOX6-208ENST00000527619 C14orf132Q9NPU4 83 aa5.39□□□□□ -1.55
SOX6-208ENST00000527619 IGKV3-7A0A075B6H7 116 aa5.38□□□□□ -1.55
SOX6-208ENST00000527619 ZNF73O43830 326 aaPredicted RBP5.38□□□□□ -1.55
SOX6-208ENST00000527619 CDKN2A-AS1Q9UH64 79 aa5.38□□□□□ -1.55
SOX6-208ENST00000527619 RP1L1Q8IWN7 2480 aaPredicted RBP5.38□□□□□ -1.55
SOX6-208ENST00000527619 ABCA4P78363 2273 aa5.38□□□□□ -1.55
SOX6-208ENST00000527619 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
SOX6-208ENST00000527619 OBSCN-AS1Q96MR7 158 aa5.38□□□□□ -1.55
SOX6-208ENST00000527619 UBE2L6O14933 153 aa5.37□□□□□ -1.55
SOX6-208ENST00000527619 RPL28P46779 137 aaKnown RBP5.37□□□□□ -1.55
SOX6-208ENST00000527619 ESRGQ1W209 222 aa5.37□□□□□ -1.55
SOX6-208ENST00000527619 LINC00588Q9Y4M8 146 aa5.37□□□□□ -1.55
SOX6-208ENST00000527619 TRAV7A0A075B6U4 112 aa5.37□□□□□ -1.55
SOX6-208ENST00000527619 ZNF625Q96I27 306 aaPredicted RBP5.37□□□□□ -1.55
SOX6-208ENST00000527619 CHCHD7Q9BUK0 85 aa5.37□□□□□ -1.55
SOX6-208ENST00000527619 TRAV23DV6A0A075B6W5 121 aa5.36□□□□□ -1.55
SOX6-208ENST00000527619 IGLV5-39A0A0G2JS06 123 aa5.36□□□□□ -1.55
SOX6-208ENST00000527619 TRBV12-3P01733 135 aa5.36□□□□□ -1.55
SOX6-208ENST00000527619 C9orf129Q5T035 196 aaKnown RBP5.36□□□□□ -1.55
SOX6-208ENST00000527619 IGFL3Q6UXB1 125 aa5.36□□□□□ -1.55
SOX6-208ENST00000527619 Q6ZVQ6 151 aa5.36□□□□□ -1.55
SOX6-208ENST00000527619 COL6A6A6NMZ7 2263 aa5.36□□□□□ -1.55
SOX6-208ENST00000527619 IGHV1OR15-1A0A075B7D0 117 aa5.36□□□□□ -1.55
SOX6-208ENST00000527619 BCE1O60756 84 aa5.36□□□□□ -1.55
SOX6-208ENST00000527619 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.35□□□□□ -1.55
SOX6-208ENST00000527619 A0A087WZ39 114 aa5.35□□□□□ -1.55
SOX6-208ENST00000527619 IGKV2-29A2NJV5 120 aaPredicted RBP5.35□□□□□ -1.55
SOX6-208ENST00000527619 RMI2Q96E14 147 aa5.35□□□□□ -1.55
SOX6-208ENST00000527619 BBC3Q96PG8 261 aaPredicted RBP5.35□□□□□ -1.55
SOX6-208ENST00000527619 RHPN1-AS1Q9BWJ2 59 aa5.35□□□□□ -1.55
SOX6-208ENST00000527619 NBASA2RRP1 2371 aa5.35□□□□□ -1.55
SOX6-208ENST00000527619 A0A087WYN8 130 aa5.35□□□□□ -1.55
SOX6-208ENST00000527619 LYRM9A8MSI8 78 aa5.35□□□□□ -1.55
SOX6-208ENST00000527619 CRPP02741 224 aa5.35□□□□□ -1.55
SOX6-208ENST00000527619 BLCAPP62952 87 aa5.35□□□□□ -1.55
SOX6-208ENST00000527619 SNURFQ9Y675 71 aa5.35□□□□□ -1.55
SOX6-208ENST00000527619 UBE2BP63146 152 aa5.34□□□□□ -1.55
SOX6-208ENST00000527619 ATP5EP2Q5VTU8 51 aa5.34□□□□□ -1.55
SOX6-208ENST00000527619 CFAP46Q8IYW2 2715 aa5.34□□□□□ -1.55
SOX6-208ENST00000527619 IGHV3-73A0A0B4J1V6 119 aa5.34□□□□□ -1.55
SOX6-208ENST00000527619 COX6A2Q02221 97 aa5.34□□□□□ -1.55
SOX6-208ENST00000527619 LINC00467Q9BRT7 94 aa5.34□□□□□ -1.55
SOX6-208ENST00000527619 PRB1P04280 392 aa5.33□□□□□ -1.56
SOX6-208ENST00000527619 C5orf56Q8N8D9 126 aa5.33□□□□□ -1.56
SOX6-208ENST00000527619 H0YGX0 51 aa5.33□□□□□ -1.56
SOX6-208ENST00000527619 NCR3O14931 201 aa5.33□□□□□ -1.56
SOX6-208ENST00000527619 LY6HO94772 140 aa5.33□□□□□ -1.56
SOX6-208ENST00000527619 PROK1P58294 105 aa5.33□□□□□ -1.56
SOX6-208ENST00000527619 PIK3CD-AS1Q5SR53 167 aa5.33□□□□□ -1.56
SOX6-208ENST00000527619 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
SOX6-208ENST00000527619 A8MUN3 132 aa5.32□□□□□ -1.56
SOX6-208ENST00000527619 SMIM1B2RUZ4 78 aa5.32□□□□□ -1.56
SOX6-208ENST00000527619 IGKV3-20P01619 116 aa5.32□□□□□ -1.56
SOX6-208ENST00000527619 ZNF462Q96JM2 2506 aa5.32□□□□□ -1.56
SOX6-208ENST00000527619 FUSP35637 526 aaKnown RBP eCLIP5.31□□□□□ -1.56
SOX6-208ENST00000527619 Q1T7F1 81 aa5.31□□□□□ -1.56
SOX6-208ENST00000527619 LINC00242Q5T6M2 205 aa5.31□□□□□ -1.56
SOX6-208ENST00000527619 LCA10Q71F78 164 aa5.31□□□□□ -1.56
SOX6-208ENST00000527619 PHF5AQ7RTV0 110 aaKnown RBP5.31□□□□□ -1.56
SOX6-208ENST00000527619 LINC00337Q8N6G1 96 aa5.31□□□□□ -1.56
SOX6-208ENST00000527619 SMIM11BQ8TCY0 68 aa5.31□□□□□ -1.56
SOX6-208ENST00000527619 IGHV3OR16-12A0A075B7B8 117 aa5.31□□□□□ -1.56
SOX6-208ENST00000527619 SPINK13Q1W4C9 94 aa5.31□□□□□ -1.56
SOX6-208ENST00000527619 IGKV2-28A0A075B6P5 120 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 LECT2O14960 151 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 IGKV2D-28P01615 120 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 IGHV3-11P01762 117 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 MIFP14174 115 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 ZFP36P26651 326 aaKnown RBP5.3□□□□□ -1.56
SOX6-208ENST00000527619 WFDC9Q8NEX5 89 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 USMG5Q96IX5 58 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 TRBV10-3A0A0K0K1G6 114 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 ENHOQ6UWT2 76 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 DYNLRB2Q8TF09 96 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 MED13LQ71F56 2210 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 IGHV3-38A0A0C4DH36 116 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 MIR7-3HGQ8N6C7 128 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 SND1-IT1Q9HBX3 110 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 ORMDL1Q9P0S3 153 aa5.3□□□□□ -1.56
SOX6-208ENST00000527619 PLA2G1BP04054 148 aaKnown RBP5.29□□□□□ -1.56
SOX6-208ENST00000527619 BSNQ9UPA5 3926 aa5.29□□□□□ -1.56
SOX6-208ENST00000527619 FAM229AH3BQW9 127 aa5.29□□□□□ -1.56
SOX6-208ENST00000527619 H3BUA1 57 aa5.29□□□□□ -1.56
SOX6-208ENST00000527619 Q6ZSN1 163 aa5.29□□□□□ -1.56
SOX6-208ENST00000527619 MYO18BQ8IUG5 2567 aa5.28□□□□□ -1.56
SOX6-208ENST00000527619 ADGRG4Q8IZF6 3080 aa5.28□□□□□ -1.56
SOX6-208ENST00000527619 SLPIP03973 132 aa5.28□□□□□ -1.56
SOX6-208ENST00000527619 RPL36AP83881 106 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 194.5 ms