RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 SLC7A5P1Q8MH63 180 aa3.38□□□□□ -1.87
SVIP-202ENST00000525670 MRAP2Q96G30 205 aa3.38□□□□□ -1.87
SVIP-202ENST00000525670 PRELID3AQ96N28 172 aa3.38□□□□□ -1.87
SVIP-202ENST00000525670 CHCHD7Q9BUK0 85 aa3.38□□□□□ -1.87
SVIP-202ENST00000525670 SEC11CQ9BY50 192 aa3.38□□□□□ -1.87
SVIP-202ENST00000525670 TRAV8-3A0A0A6YYJ7 113 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 TGIF2-C20orf24A0A0A6YYL0 155 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 C7orf77A4D0Y5 90 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 XCL1P47992 114 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 KRTAP10-1P60331 282 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 LAGE3Q14657 143 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 HIGD2BQ4VC39 106 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 TMEM97Q5BJF2 176 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 ORMDL3Q8N138 153 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 Q8N814 137 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 FRZBQ92765 325 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 RMI2Q96E14 147 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 BTF3L4Q96K17 158 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 SMIM2Q9BVW6 85 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 PYGO1Q9Y3Y4 419 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 FAT1Q14517 4588 aa3.37□□□□□ -1.87
SVIP-202ENST00000525670 ABCA13Q86UQ4 5058 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 TRBV6-5A0A0K0K1A5 114 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 A0A1B0GW15 77 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 LRCOL1A6NCL2 159 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 S100A8P05109 93 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 S100PP25815 95 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 ELOBQ15370 118 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 TMEM136Q6ZRR5 245 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 ATP5L2Q7Z4Y8 100 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 CBLN2Q8IUK8 224 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 OR5A1Q8NGJ0 315 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 LINC00526Q96FQ7 95 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 TMEM101Q96IK0 257 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 KIR2DL4Q99706 377 aa3.36□□□□□ -1.87
SVIP-202ENST00000525670 CARHSP1Q9Y2V2 147 aaKnown RBP3.36□□□□□ -1.87
SVIP-202ENST00000525670 VPS13BQ7Z7G8 4022 aa3.35□□□□□ -1.87
SVIP-202ENST00000525670 TRAV13-1A0A0B4J241 112 aa3.35□□□□□ -1.87
SVIP-202ENST00000525670 TRBV27A0A0K0K1C4 114 aa3.35□□□□□ -1.87
SVIP-202ENST00000525670 CCL25O15444 150 aa3.35□□□□□ -1.87
SVIP-202ENST00000525670 POLR2KP53803 58 aaKnown RBP3.35□□□□□ -1.87
SVIP-202ENST00000525670 PKIAP61925 76 aa3.35□□□□□ -1.87
SVIP-202ENST00000525670 Q0VG73 95 aa3.35□□□□□ -1.87
SVIP-202ENST00000525670 RHEBQ15382 184 aa3.35□□□□□ -1.87
SVIP-202ENST00000525670 MIAQ16674 131 aa3.35□□□□□ -1.87
SVIP-202ENST00000525670 NDUFA5Q16718 116 aa3.35□□□□□ -1.87
SVIP-202ENST00000525670 CHCHD10Q8WYQ3 142 aaPredicted RBP3.35□□□□□ -1.87
SVIP-202ENST00000525670 MAP1LC3AQ9H492 121 aa3.35□□□□□ -1.87
SVIP-202ENST00000525670 SCO1O75880 301 aa3.34□□□□□ -1.87
SVIP-202ENST00000525670 SMR3BP02814 79 aaPredicted RBP3.34□□□□□ -1.87
SVIP-202ENST00000525670 ESDP10768 282 aa3.34□□□□□ -1.87
SVIP-202ENST00000525670 IFI27P40305 119 aaPredicted RBP3.34□□□□□ -1.87
SVIP-202ENST00000525670 FABP9Q0Z7S8 132 aa3.34□□□□□ -1.87
SVIP-202ENST00000525670 ADAMTSL4-AS1Q5T5F5 129 aa3.34□□□□□ -1.87
SVIP-202ENST00000525670 SVBPQ8N300 66 aa3.34□□□□□ -1.87
SVIP-202ENST00000525670 PRR34Q9NV39 138 aa3.34□□□□□ -1.87
SVIP-202ENST00000525670 UBE2D4Q9Y2X8 147 aa3.34□□□□□ -1.87
SVIP-202ENST00000525670 K7EP13 123 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 SNAPINO95295 136 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 PPP1R17O96001 155 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 RAB5AP20339 215 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 PMCHL1Q16048 86 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 C10orf91Q5T1B1 145 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 KRTAP26-1Q6PEX3 210 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 C5orf38Q86SI9 138 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 ZNF664Q8N3J9 261 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 C15orf56Q8N910 161 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 C20orf78Q9BR46 151 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 PCLOQ9Y6V0 5065 aa3.33□□□□□ -1.88
SVIP-202ENST00000525670 LINC00959A0A1B0GUT2 108 aa3.32□□□□□ -1.88
SVIP-202ENST00000525670 PPBPP02775 128 aa3.32□□□□□ -1.88
SVIP-202ENST00000525670 CHTF8P0CG12 524 aa3.32□□□□□ -1.88
SVIP-202ENST00000525670 ZNF25P17030 456 aaPredicted RBP3.32□□□□□ -1.88
SVIP-202ENST00000525670 C2orf66Q6UXQ4 117 aa3.32□□□□□ -1.88
SVIP-202ENST00000525670 Q8N8P6 123 aa3.32□□□□□ -1.88
SVIP-202ENST00000525670 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
SVIP-202ENST00000525670 TRAPPC1Q9Y5R8 145 aa3.32□□□□□ -1.88
SVIP-202ENST00000525670 IGLV4-3A0A075B6K6 122 aa3.31□□□□□ -1.88
SVIP-202ENST00000525670 TRBV24-1A0A075B6N3 115 aa3.31□□□□□ -1.88
SVIP-202ENST00000525670 TRAV9-1A0A075B6T8 112 aa3.31□□□□□ -1.88
SVIP-202ENST00000525670 IGKV2-24A0A0C4DH68 120 aa3.31□□□□□ -1.88
SVIP-202ENST00000525670 SS18Q15532 418 aa3.31□□□□□ -1.88
SVIP-202ENST00000525670 FA2HQ7L5A8 372 aa3.31□□□□□ -1.88
SVIP-202ENST00000525670 MRPL52Q86TS9 123 aaKnown RBP3.31□□□□□ -1.88
SVIP-202ENST00000525670 ALKBH7Q9BT30 221 aaPredicted RBP3.31□□□□□ -1.88
SVIP-202ENST00000525670 GNB1LQ9BYB4 327 aa3.31□□□□□ -1.88
SVIP-202ENST00000525670 SMCO4Q9NRQ5 59 aa3.31□□□□□ -1.88
SVIP-202ENST00000525670 CYSLTR1Q9Y271 337 aa3.31□□□□□ -1.88
SVIP-202ENST00000525670 PKHD1L1Q86WI1 4243 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 TRAV8-4A0A0B4J246 113 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 A0A0J9YXV3 536 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 PANO1I0J062 215 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 COX7A2LO14548 114 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 PHOX2AO14813 284 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 RPL32P62910 135 aaKnown RBP3.3□□□□□ -1.88
SVIP-202ENST00000525670 SPAG11BQ08648 103 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 SCXQ7RTU7 201 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 ORAOV1Q8WV07 137 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 FAM104AQ969W3 186 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 NXT2Q9NPJ8 142 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms