RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FAM104AQ969W3 186 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 BTF3L4Q96K17 158 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 FAM210BQ96KR6 192 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 UPK3BQ9BT76 320 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 TMEM70Q9BUB7 260 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 CHCHD7Q9BUK0 85 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 NIT2Q9NQR4 276 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 MRPS16Q9Y3D3 137 aaKnown RBP1.93□□□□□ -2.1
CSDE1-208ENST00000524652 TRAV9-1A0A075B6T8 112 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 TRBV6-8A0A0A6YYG3 113 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 TRBV27A0A0K0K1C4 114 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 A0A1B0GW15 77 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 SDHAF1A6NFY7 115 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 RPL37AP8A6NKH3 93 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 M0R2N4 97 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 CKS2P33552 79 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 TCTAP57738 103 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 IQCJQ1A5X6 159 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 MPV17L2Q567V2 206 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 OR10J3Q5JRS4 329 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 LELP1Q5T871 98 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 KCNIP4Q6PIL6 250 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 DAZ4Q86SG3 579 aaKnown RBP1.92□□□□□ -2.1
CSDE1-208ENST00000524652 BORCS7Q96B45 105 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 MRAP2Q96G30 205 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 PRADC1Q9BSG0 188 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 ALKBH7Q9BT30 221 aaPredicted RBP1.92□□□□□ -2.1
CSDE1-208ENST00000524652 GNB1LQ9BYB4 327 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 GTSF1LQ9H1H1 148 aa1.92□□□□□ -2.1
CSDE1-208ENST00000524652 DAZ3Q9NR90 486 aaKnown RBP1.92□□□□□ -2.1
CSDE1-208ENST00000524652 NEBP20929 6669 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 IGLV4-60A0A075B6I1 120 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.91□□□□□ -2.1
CSDE1-208ENST00000524652 A0A096LNJ9 63 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 NBDYA0A0U1RRE5 68 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 LOC389332A0A1B0GUA5 103 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 IGKV2-29A2NJV5 120 aaPredicted RBP1.91□□□□□ -2.1
CSDE1-208ENST00000524652 H7C1H1 209 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 TCAPO15273 167 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 SIVA1O15304 175 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 IGHV3-30P01768 117 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 IGHV3-33P01772 117 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 HLA-DQA1P01909 254 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 TRGC2P03986 189 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 IGHV3-30-3P0DP02 117 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 IGHV3-30-5P0DP03 117 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 ESDP10768 282 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 S100PP25815 95 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 IFI27P40305 119 aaPredicted RBP1.91□□□□□ -2.1
CSDE1-208ENST00000524652 CCL18P55774 89 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 RPL39P62891 51 aaKnown RBP1.91□□□□□ -2.1
CSDE1-208ENST00000524652 FABP9Q0Z7S8 132 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 Q6ZRN7 208 aaPredicted RBP1.91□□□□□ -2.1
CSDE1-208ENST00000524652 SMIM15Q7Z3B0 74 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 NIT1Q86X76 327 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 UBE2DNLQ8IWF7 75 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 ORMDL3Q8N138 153 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 Q8N976 141 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 C20orf203Q8NBC4 194 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 C18orf32Q8TCD1 76 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 FRZBQ92765 325 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 PRELID3AQ96N28 172 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 SMIM2Q9BVW6 85 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 ST20Q9HBF5 79 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 SMCO4Q9NRQ5 59 aa1.91□□□□□ -2.1
CSDE1-208ENST00000524652 LRP1Q07954 4544 aaKnown RBP1.9□□□□□ -2.1
CSDE1-208ENST00000524652 TRBV25-1A0A075B6N4 114 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 IGHV1-24A0A0C4DH33 117 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 LINC01546A6NGU7 62 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 I3L3M4 83 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 NUPR1O60356 82 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 APCSP02743 223 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 MT-ND6P03923 174 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 S100A8P05109 93 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 RAB5AP20339 215 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 PMCHP20382 165 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 S100A1P23297 94 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 RBX1P62877 108 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 RPL32P62910 135 aaKnown RBP1.9□□□□□ -2.11
CSDE1-208ENST00000524652 COTL1Q14019 142 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 WFDC2Q14508 124 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 RNASE13Q5GAN3 156 aaKnown RBP1.9□□□□□ -2.11
CSDE1-208ENST00000524652 LINC01556Q5JQF7 62 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 KRTAP26-1Q6PEX3 210 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 CLPSL2Q6UWE3 100 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 ENHOQ6UWT2 76 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 LINC00173Q6ZV60 143 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 C20orf78Q9BR46 151 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 UBE2D4Q9Y2X8 147 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 TRAPPC1Q9Y5R8 145 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 MYCBP2O75592 4640 aa1.9□□□□□ -2.11
CSDE1-208ENST00000524652 IBA57-AS1B1ANH7 110 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 HIST1H2BKO60814 126 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 PPBPP02775 128 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 HIST1H2BJP06899 126 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 FGF6P10767 208 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 HIST1H2BOP23527 126 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 HIST1H2BBP33778 126 aa1.89□□□□□ -2.11
CSDE1-208ENST00000524652 FUSP35637 526 aaKnown RBP eCLIP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms