RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 IGLV3-25P01717 112 aa4.42□□□□□ -1.7
SDC2-208ENST00000523877 LYZL1Q6UWQ5 148 aa4.42□□□□□ -1.7
SDC2-208ENST00000523877 C2orf66Q6UXQ4 117 aa4.42□□□□□ -1.7
SDC2-208ENST00000523877 Q6ZQT0 140 aa4.42□□□□□ -1.7
SDC2-208ENST00000523877 MUC4Q99102 2169 aa4.42□□□□□ -1.7
SDC2-208ENST00000523877 BRWD1Q9NSI6 2320 aa4.42□□□□□ -1.7
SDC2-208ENST00000523877 ZFYVE26Q68DK2 2539 aa4.42□□□□□ -1.7
SDC2-208ENST00000523877 GOLGA4Q13439 2230 aaKnown RBP4.41□□□□□ -1.7
SDC2-208ENST00000523877 CEP250Q9BV73 2442 aa4.41□□□□□ -1.7
SDC2-208ENST00000523877 IGLV8-61A0A075B6I0 122 aa4.41□□□□□ -1.7
SDC2-208ENST00000523877 TRAV10A0A0B4J240 114 aa4.41□□□□□ -1.7
SDC2-208ENST00000523877 BPY2O14599 106 aa4.41□□□□□ -1.7
SDC2-208ENST00000523877 CLPSP04118 112 aa4.41□□□□□ -1.7
SDC2-208ENST00000523877 FAM27BQ5VT28 67 aa4.41□□□□□ -1.7
SDC2-208ENST00000523877 TMEM105Q8N8V8 129 aa4.41□□□□□ -1.7
SDC2-208ENST00000523877 MUC7Q8TAX7 377 aa4.41□□□□□ -1.7
SDC2-208ENST00000523877 AMELXQ99217 191 aa4.41□□□□□ -1.7
SDC2-208ENST00000523877 MRPL36Q9P0J6 103 aaKnown RBP4.41□□□□□ -1.7
SDC2-208ENST00000523877 SMG1Q96Q15 3661 aaKnown RBP4.41□□□□□ -1.7
SDC2-208ENST00000523877 FRYLO94915 3013 aa4.4□□□□□ -1.7
SDC2-208ENST00000523877 IGHV4OR15-8A0A075B7B6 117 aa4.4□□□□□ -1.71
SDC2-208ENST00000523877 IGHV3OR16-8A0A075B7F1 116 aa4.4□□□□□ -1.71
SDC2-208ENST00000523877 H3BSH0 61 aa4.4□□□□□ -1.71
SDC2-208ENST00000523877 RTL8CO15255 209 aa4.4□□□□□ -1.71
SDC2-208ENST00000523877 DEFA4P12838 97 aa4.4□□□□□ -1.71
SDC2-208ENST00000523877 MIR22HGQ0VDD5 57 aa4.4□□□□□ -1.71
SDC2-208ENST00000523877 PDE6HQ13956 83 aa4.4□□□□□ -1.71
SDC2-208ENST00000523877 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
SDC2-208ENST00000523877 C7orf33Q8WU49 177 aa4.4□□□□□ -1.71
SDC2-208ENST00000523877 NAV2Q8IVL1 2488 aa4.4□□□□□ -1.71
SDC2-208ENST00000523877 IGLV2-18A0A075B6J9 118 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 IGLV4-3A0A075B6K6 122 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 A0A087WSZ3 146 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 IGHV3-15A0A0B4J1V0 119 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 IGHV3-66A0A0C4DH42 116 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 LRCOL1A6NCL2 159 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 CYSRT1A8MQ03 144 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 H0YGX0 51 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 IGKV3-11P04433 115 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 NNATQ16517 81 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 ODF3L2Q3SX64 289 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 C14orf178Q8N769 122 aaPredicted RBP4.39□□□□□ -1.71
SDC2-208ENST00000523877 KLHL30-AS1Q8NEE0 82 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 ZNF462Q96JM2 2506 aa4.39□□□□□ -1.71
SDC2-208ENST00000523877 CABIN1Q9Y6J0 2220 aa4.38□□□□□ -1.71
SDC2-208ENST00000523877 LOC400499M0QZD8 3231 aa4.38□□□□□ -1.71
SDC2-208ENST00000523877 A0A087WW49 117 aa4.38□□□□□ -1.71
SDC2-208ENST00000523877 LCE6AA0A183 80 aa4.38□□□□□ -1.71
SDC2-208ENST00000523877 PDE6GP18545 87 aa4.38□□□□□ -1.71
SDC2-208ENST00000523877 SUMO4Q6EEV6 95 aa4.38□□□□□ -1.71
SDC2-208ENST00000523877 Q86TA4 180 aa4.38□□□□□ -1.71
SDC2-208ENST00000523877 SPANXA2-OT1Q8N9U9 137 aa4.38□□□□□ -1.71
SDC2-208ENST00000523877 LINC00208Q96KT6 92 aa4.38□□□□□ -1.71
SDC2-208ENST00000523877 DHRS4-AS1Q9P1J3 65 aa4.38□□□□□ -1.71
SDC2-208ENST00000523877 HELZ2Q9BYK8 2649 aaKnown RBP4.38□□□□□ -1.71
SDC2-208ENST00000523877 OTOGLQ3ZCN5 2332 aa4.38□□□□□ -1.71
SDC2-208ENST00000523877 MDC1Q14676 2089 aaKnown RBP4.37□□□□□ -1.71
SDC2-208ENST00000523877 EP300Q09472 2414 aaPredicted RBP4.37□□□□□ -1.71
SDC2-208ENST00000523877 INTS1Q8N201 2190 aaKnown RBP4.37□□□□□ -1.71
SDC2-208ENST00000523877 FRYQ5TBA9 3013 aa4.37□□□□□ -1.71
SDC2-208ENST00000523877 IGKV1D-42A0A075B6H8 117 aa4.37□□□□□ -1.71
SDC2-208ENST00000523877 TRBV10-1A0A0K0K1A3 114 aa4.37□□□□□ -1.71
SDC2-208ENST00000523877 IGHV3-23P01764 117 aa4.37□□□□□ -1.71
SDC2-208ENST00000523877 LINC01547P58512 204 aaPredicted RBP4.37□□□□□ -1.71
SDC2-208ENST00000523877 KRTAP10-2P60368 255 aa4.37□□□□□ -1.71
SDC2-208ENST00000523877 SPAG11BQ08648 103 aa4.37□□□□□ -1.71
SDC2-208ENST00000523877 SPAG11AQ6PDA7 123 aa4.37□□□□□ -1.71
SDC2-208ENST00000523877 WFDC9Q8NEX5 89 aa4.37□□□□□ -1.71
SDC2-208ENST00000523877 RPL36ALQ969Q0 106 aaKnown RBP4.37□□□□□ -1.71
SDC2-208ENST00000523877 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
SDC2-208ENST00000523877 TET2Q6N021 2002 aaPredicted RBP4.37□□□□□ -1.71
SDC2-208ENST00000523877 IGLV10-54A0A075B6I4 117 aa4.36□□□□□ -1.71
SDC2-208ENST00000523877 CCL22O00626 93 aa4.36□□□□□ -1.71
SDC2-208ENST00000523877 IGLV3-19P01714 112 aa4.36□□□□□ -1.71
SDC2-208ENST00000523877 CTSGP08311 255 aa4.36□□□□□ -1.71
SDC2-208ENST00000523877 P0C879 139 aa4.36□□□□□ -1.71
SDC2-208ENST00000523877 CSAG1Q6PB30 78 aa4.36□□□□□ -1.71
SDC2-208ENST00000523877 H3BQ85 93 aa4.35□□□□□ -1.71
SDC2-208ENST00000523877 IGHV1-46P01743 117 aa4.35□□□□□ -1.71
SDC2-208ENST00000523877 KPRPQ5T749 579 aaPredicted RBP4.35□□□□□ -1.71
SDC2-208ENST00000523877 Q8NAQ8 132 aa4.35□□□□□ -1.71
SDC2-208ENST00000523877 COX7B2Q8TF08 81 aa4.35□□□□□ -1.71
SDC2-208ENST00000523877 CNFNQ9BYD5 112 aa4.35□□□□□ -1.71
SDC2-208ENST00000523877 FAM215AQ9Y5M1 114 aa4.35□□□□□ -1.71
SDC2-208ENST00000523877 WDFY3Q8IZQ1 3526 aa4.34□□□□□ -1.71
SDC2-208ENST00000523877 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
SDC2-208ENST00000523877 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.71
SDC2-208ENST00000523877 IGHV1-8P0DP01 117 aa4.34□□□□□ -1.71
SDC2-208ENST00000523877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.34□□□□□ -1.71
SDC2-208ENST00000523877 DEFB106AQ8N104 65 aa4.34□□□□□ -1.71
SDC2-208ENST00000523877 LYPD1Q8N2G4 141 aa4.34□□□□□ -1.71
SDC2-208ENST00000523877 SMIM2Q9BVW6 85 aa4.34□□□□□ -1.71
SDC2-208ENST00000523877 ITPR1Q14643 2758 aa4.34□□□□□ -1.72
SDC2-208ENST00000523877 ANKRD17O75179 2603 aaKnown RBP4.33□□□□□ -1.72
SDC2-208ENST00000523877 KIF26BQ2KJY2 2108 aa4.33□□□□□ -1.72
SDC2-208ENST00000523877 HEATR5BQ9P2D3 2071 aa4.33□□□□□ -1.72
SDC2-208ENST00000523877 IGLV4-69A0A075B6H9 119 aa4.33□□□□□ -1.72
SDC2-208ENST00000523877 IGHV1-3A0A0C4DH29 117 aa4.33□□□□□ -1.72
SDC2-208ENST00000523877 A0A1W2PNM2 257 aa4.33□□□□□ -1.72
SDC2-208ENST00000523877 A6NDX4 124 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms