RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 FAM30AQ9NZY2 134 aa6.08□□□□□ -1.44
CLK4-209ENST00000521621 A0A087WZ39 114 aa6.08□□□□□ -1.44
CLK4-209ENST00000521621 TGIF2-C20orf24A0A0A6YYL0 155 aa6.08□□□□□ -1.44
CLK4-209ENST00000521621 LOC389332A0A1B0GUA5 103 aa6.08□□□□□ -1.44
CLK4-209ENST00000521621 XCL1P47992 114 aa6.08□□□□□ -1.44
CLK4-209ENST00000521621 RAB5BP61020 215 aa6.08□□□□□ -1.44
CLK4-209ENST00000521621 TEX43Q6ZNM6 134 aa6.08□□□□□ -1.44
CLK4-209ENST00000521621 TRAPPC1Q9Y5R8 145 aa6.08□□□□□ -1.44
CLK4-209ENST00000521621 Q6ZN92 141 aa6.07□□□□□ -1.44
CLK4-209ENST00000521621 PRSS3P2Q8NHM4 247 aa6.07□□□□□ -1.44
CLK4-209ENST00000521621 LINC00474Q9P2X8 69 aa6.07□□□□□ -1.44
CLK4-209ENST00000521621 IFITM10A6NMD0 228 aa6.07□□□□□ -1.44
CLK4-209ENST00000521621 FABP9Q0Z7S8 132 aa6.07□□□□□ -1.44
CLK4-209ENST00000521621 FUSP35637 526 aaKnown RBP eCLIP6.06□□□□□ -1.44
CLK4-209ENST00000521621 LINC00242Q5T6M2 205 aa6.06□□□□□ -1.44
CLK4-209ENST00000521621 C18orf32Q8TCD1 76 aa6.06□□□□□ -1.44
CLK4-209ENST00000521621 IGLV5-45A0A087WSX0 123 aa6.06□□□□□ -1.44
CLK4-209ENST00000521621 KIAA1644Q3SXP7 199 aa6.06□□□□□ -1.44
CLK4-209ENST00000521621 SPACA4Q8TDM5 124 aa6.06□□□□□ -1.44
CLK4-209ENST00000521621 TLX1NBP0CAT3 122 aa6.06□□□□□ -1.44
CLK4-209ENST00000521621 PDZD11Q5EBL8 140 aa6.06□□□□□ -1.44
CLK4-209ENST00000521621 VCX2Q9H322 139 aa6.06□□□□□ -1.44
CLK4-209ENST00000521621 PLAC8Q9NZF1 115 aa6.06□□□□□ -1.44
CLK4-209ENST00000521621 IGLV4-69A0A075B6H9 119 aa6.05□□□□□ -1.44
CLK4-209ENST00000521621 TRAV13-1A0A0B4J241 112 aa6.05□□□□□ -1.44
CLK4-209ENST00000521621 IGKV3OR2-268A0A0C4DH90 116 aa6.05□□□□□ -1.44
CLK4-209ENST00000521621 FAM229AH3BQW9 127 aa6.05□□□□□ -1.44
CLK4-209ENST00000521621 MALP21145 153 aa6.05□□□□□ -1.44
CLK4-209ENST00000521621 HERVK_113P63121 156 aa6.05□□□□□ -1.44
CLK4-209ENST00000521621 SCXQ7RTU7 201 aa6.05□□□□□ -1.44
CLK4-209ENST00000521621 CHCHD1Q96BP2 118 aaKnown RBP6.05□□□□□ -1.44
CLK4-209ENST00000521621 MRPL35Q9NZE8 188 aaKnown RBP6.05□□□□□ -1.44
CLK4-209ENST00000521621 ZNF561-AS1K7EIQ3 104 aa6.05□□□□□ -1.44
CLK4-209ENST00000521621 SYCNQ0VAF6 134 aa6.05□□□□□ -1.44
CLK4-209ENST00000521621 FA2HQ7L5A8 372 aa6.05□□□□□ -1.44
CLK4-209ENST00000521621 URB1-AS1Q96HZ7 61 aa6.05□□□□□ -1.44
CLK4-209ENST00000521621 TINCRA0A1B0GVN0 87 aa6.04□□□□□ -1.44
CLK4-209ENST00000521621 LINC00614P0C842 121 aa6.04□□□□□ -1.44
CLK4-209ENST00000521621 CIRBP-AS1Q8TBR5 109 aa6.04□□□□□ -1.44
CLK4-209ENST00000521621 CARD19Q96LW7 228 aa6.04□□□□□ -1.44
CLK4-209ENST00000521621 OPRPNQ99935 248 aaPredicted RBP6.04□□□□□ -1.44
CLK4-209ENST00000521621 PLA2G1BP04054 148 aaKnown RBP6.04□□□□□ -1.44
CLK4-209ENST00000521621 SCGB3A1Q96QR1 104 aa6.03□□□□□ -1.44
CLK4-209ENST00000521621 KRTAP10-4P60372 401 aaPredicted RBP6.03□□□□□ -1.44
CLK4-209ENST00000521621 KIAA0087Q14695 138 aa6.03□□□□□ -1.44
CLK4-209ENST00000521621 RNASE13Q5GAN3 156 aaKnown RBP6.03□□□□□ -1.44
CLK4-209ENST00000521621 Q5VSD8 79 aa6.03□□□□□ -1.44
CLK4-209ENST00000521621 A0A096LNJ9 63 aa6.02□□□□□ -1.45
CLK4-209ENST00000521621 TRBV30A0A0K0K1B3 111 aa6.02□□□□□ -1.45
CLK4-209ENST00000521621 LOC107984640A0A0U1RRK4 108 aa6.02□□□□□ -1.45
CLK4-209ENST00000521621 HIGD2BQ4VC39 106 aa6.02□□□□□ -1.45
CLK4-209ENST00000521621 HBDP02042 147 aa6.02□□□□□ -1.45
CLK4-209ENST00000521621 PMVKQ15126 192 aa6.02□□□□□ -1.45
CLK4-209ENST00000521621 Q8IZM0 81 aa6.02□□□□□ -1.45
CLK4-209ENST00000521621 CST9LQ9H4G1 147 aa6.02□□□□□ -1.45
CLK4-209ENST00000521621 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.02□□□□□ -1.45
CLK4-209ENST00000521621 ATP5LO75964 103 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 COX6A2Q02221 97 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 SPAG11BQ08648 103 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 SLC7A5P1Q8MH63 180 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 KRTAP4-5Q9BYR2 181 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 PKHD1L1Q86WI1 4243 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.01□□□□□ -1.45
CLK4-209ENST00000521621 IGLC3P0DOY3 106 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 LINC00528Q8N1L1 170 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 COLCA2A8K830 154 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 NDUFA1O15239 70 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 CXCL5P42830 114 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 C5orf38Q86SI9 138 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 ORAOV1Q8WV07 137 aa6.01□□□□□ -1.45
CLK4-209ENST00000521621 CAMK2N2Q96S95 79 aa6□□□□□ -1.45
CLK4-209ENST00000521621 TRAV12-1A0A0B4J245 112 aa6□□□□□ -1.45
CLK4-209ENST00000521621 PTTG1IPP53801 180 aa6□□□□□ -1.45
CLK4-209ENST00000521621 LINC01620Q4KN68 170 aa6□□□□□ -1.45
CLK4-209ENST00000521621 Q6ZRU5 148 aa6□□□□□ -1.45
CLK4-209ENST00000521621 CBLN2Q8IUK8 224 aa6□□□□□ -1.45
CLK4-209ENST00000521621 PACRGQ96M98 296 aaPredicted RBP5.99□□□□□ -1.45
CLK4-209ENST00000521621 PANO1I0J062 215 aa5.99□□□□□ -1.45
CLK4-209ENST00000521621 A0A096LNI7 61 aa5.98□□□□□ -1.45
CLK4-209ENST00000521621 INAFM2P0DMQ5 153 aa5.98□□□□□ -1.45
CLK4-209ENST00000521621 SFTA2Q6UW10 78 aa5.98□□□□□ -1.45
CLK4-209ENST00000521621 GEMIN7Q9H840 131 aaKnown RBP5.98□□□□□ -1.45
CLK4-209ENST00000521621 A0A087WYN8 130 aa5.97□□□□□ -1.45
CLK4-209ENST00000521621 IGLV5-39A0A0G2JS06 123 aa5.97□□□□□ -1.45
CLK4-209ENST00000521621 A0A0J9YXV3 536 aa5.97□□□□□ -1.45
CLK4-209ENST00000521621 SMIM1B2RUZ4 78 aa5.97□□□□□ -1.45
CLK4-209ENST00000521621 H3BRM9 83 aa5.97□□□□□ -1.45
CLK4-209ENST00000521621 CDKN2A-AS1Q9UH64 79 aa5.97□□□□□ -1.45
CLK4-209ENST00000521621 C6orf48Q9UBA6 75 aa5.96□□□□□ -1.45
CLK4-209ENST00000521621 SMR3BP02814 79 aaPredicted RBP5.95□□□□□ -1.46
CLK4-209ENST00000521621 TRGC2P03986 189 aa5.95□□□□□ -1.46
CLK4-209ENST00000521621 ZC2HC1BQ5TFG8 222 aa5.95□□□□□ -1.46
CLK4-209ENST00000521621 RPL37AP61513 92 aaKnown RBP5.95□□□□□ -1.46
CLK4-209ENST00000521621 NDUFC2-KCTD14E9PQ53 114 aa5.95□□□□□ -1.46
CLK4-209ENST00000521621 F8VRH5 84 aa5.95□□□□□ -1.46
CLK4-209ENST00000521621 PRSS2P07478 247 aa5.95□□□□□ -1.46
CLK4-209ENST00000521621 C7orf33Q8WU49 177 aa5.95□□□□□ -1.46
CLK4-209ENST00000521621 MAJINQ3KP22 176 aa5.94□□□□□ -1.46
CLK4-209ENST00000521621 PLA2G2DQ9UNK4 145 aa5.94□□□□□ -1.46
CLK4-209ENST00000521621 ABCA13Q86UQ4 5058 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms