RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.56□□□□□ -1.84
NPM1-207ENST00000521260 IGHV3-73A0A0B4J1V6 119 aa3.56□□□□□ -1.84
NPM1-207ENST00000521260 IGHV7-81A0A0B4J1V7 117 aa3.56□□□□□ -1.84
NPM1-207ENST00000521260 IGHV3-72A0A0B4J1Y9 119 aa3.56□□□□□ -1.84
NPM1-207ENST00000521260 IGHV1-46P01743 117 aa3.56□□□□□ -1.84
NPM1-207ENST00000521260 BSPH1Q075Z2 132 aa3.56□□□□□ -1.84
NPM1-207ENST00000521260 MOBPQ13875 183 aa3.56□□□□□ -1.84
NPM1-207ENST00000521260 XAGE1AQ9HD64 81 aa3.56□□□□□ -1.84
NPM1-207ENST00000521260 DPM3Q9P2X0 92 aa3.56□□□□□ -1.84
NPM1-207ENST00000521260 LINC01558Q9Y6Z2 57 aa3.56□□□□□ -1.84
NPM1-207ENST00000521260 IGHV3-35A0A0C4DH35 117 aa3.55□□□□□ -1.84
NPM1-207ENST00000521260 CLPSL1A2RUU4 121 aa3.55□□□□□ -1.84
NPM1-207ENST00000521260 RNASE13Q5GAN3 156 aaKnown RBP3.55□□□□□ -1.84
NPM1-207ENST00000521260 ZNRD1Q9P1U0 126 aa3.55□□□□□ -1.84
NPM1-207ENST00000521260 KNTC1P50748 2209 aa3.55□□□□□ -1.84
NPM1-207ENST00000521260 IGHV6-1A0A0B4J1U7 121 aa3.54□□□□□ -1.84
NPM1-207ENST00000521260 PCNX2A6NKB5 2137 aa3.54□□□□□ -1.84
NPM1-207ENST00000521260 IGHV3-53P01767 116 aa3.54□□□□□ -1.84
NPM1-207ENST00000521260 PRR3P79522 188 aaKnown RBP3.54□□□□□ -1.84
NPM1-207ENST00000521260 SPAG11BQ08648 103 aa3.54□□□□□ -1.84
NPM1-207ENST00000521260 MINOS1Q5TGZ0 78 aa3.54□□□□□ -1.84
NPM1-207ENST00000521260 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
NPM1-207ENST00000521260 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
NPM1-207ENST00000521260 KCNQ1DNQ9H478 68 aa3.54□□□□□ -1.84
NPM1-207ENST00000521260 DSCAML1Q8TD84 2053 aa3.54□□□□□ -1.84
NPM1-207ENST00000521260 ARFGEF3Q5TH69 2177 aa3.53□□□□□ -1.84
NPM1-207ENST00000521260 IGHV3OR16-12A0A075B7B8 117 aa3.53□□□□□ -1.84
NPM1-207ENST00000521260 IGHV4-30-2A0A087WSY4 118 aa3.53□□□□□ -1.84
NPM1-207ENST00000521260 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
NPM1-207ENST00000521260 H3BUA1 57 aa3.53□□□□□ -1.84
NPM1-207ENST00000521260 ZNF843Q8N446 348 aa3.53□□□□□ -1.84
NPM1-207ENST00000521260 FDCSPQ8NFU4 85 aa3.53□□□□□ -1.84
NPM1-207ENST00000521260 FAM104AQ969W3 186 aa3.53□□□□□ -1.84
NPM1-207ENST00000521260 MINOS1-NBL1R4GNA1 71 aa3.53□□□□□ -1.84
NPM1-207ENST00000521260 PRB4P10163 310 aaPredicted RBP3.52□□□□□ -1.85
NPM1-207ENST00000521260 NANOS2P60321 138 aaKnown RBP3.52□□□□□ -1.85
NPM1-207ENST00000521260 COX6A2Q02221 97 aa3.52□□□□□ -1.85
NPM1-207ENST00000521260 Q8IZM0 81 aa3.52□□□□□ -1.85
NPM1-207ENST00000521260 CNEP1R1Q8N9A8 125 aa3.52□□□□□ -1.85
NPM1-207ENST00000521260 LINC00476Q8WZB0 136 aa3.52□□□□□ -1.85
NPM1-207ENST00000521260 USMG5Q96IX5 58 aa3.52□□□□□ -1.85
NPM1-207ENST00000521260 TOMM7Q9P0U1 55 aa3.52□□□□□ -1.85
NPM1-207ENST00000521260 ZNF706Q9Y5V0 76 aaPredicted RBP3.52□□□□□ -1.85
NPM1-207ENST00000521260 S4R3C0 116 aa3.52□□□□□ -1.85
NPM1-207ENST00000521260 ZNF407Q9C0G0 2248 aa3.52□□□□□ -1.85
NPM1-207ENST00000521260 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.51□□□□□ -1.85
NPM1-207ENST00000521260 PINLYPA6NC86 204 aa3.51□□□□□ -1.85
NPM1-207ENST00000521260 IGHV3-23P01764 117 aa3.51□□□□□ -1.85
NPM1-207ENST00000521260 DEFB103AP81534 67 aa3.51□□□□□ -1.85
NPM1-207ENST00000521260 C18orf65Q6ZTR6 163 aa3.51□□□□□ -1.85
NPM1-207ENST00000521260 SMIM29Q86T20 159 aa3.51□□□□□ -1.85
NPM1-207ENST00000521260 PDE4DIPQ5VU43 2346 aa3.5□□□□□ -1.85
NPM1-207ENST00000521260 IGHV3-66A0A0C4DH42 116 aa3.5□□□□□ -1.85
NPM1-207ENST00000521260 ATP6V0E1O15342 81 aa3.5□□□□□ -1.85
NPM1-207ENST00000521260 CNBPP62633 177 aaKnown RBP3.5□□□□□ -1.85
NPM1-207ENST00000521260 SPINK14Q6IE38 97 aa3.5□□□□□ -1.85
NPM1-207ENST00000521260 KRTAP3-1Q9BYR8 98 aa3.5□□□□□ -1.85
NPM1-207ENST00000521260 CACNA1DQ01668 2161 aa3.5□□□□□ -1.85
NPM1-207ENST00000521260 FREM1Q5H8C1 2179 aa3.5□□□□□ -1.85
NPM1-207ENST00000521260 RP1P56715 2156 aa3.49□□□□□ -1.85
NPM1-207ENST00000521260 IGLV4-60A0A075B6I1 120 aa3.49□□□□□ -1.85
NPM1-207ENST00000521260 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
NPM1-207ENST00000521260 PLA2G2AP14555 144 aa3.49□□□□□ -1.85
NPM1-207ENST00000521260 C10orf25Q5T742 122 aa3.49□□□□□ -1.85
NPM1-207ENST00000521260 LCE3BQ5TA77 95 aa3.49□□□□□ -1.85
NPM1-207ENST00000521260 SPAG11AQ6PDA7 123 aa3.49□□□□□ -1.85
NPM1-207ENST00000521260 Q6ZQY7 126 aa3.49□□□□□ -1.85
NPM1-207ENST00000521260 DEFB104AQ8WTQ1 72 aa3.49□□□□□ -1.85
NPM1-207ENST00000521260 ARRDC1-AS1Q9H2J1 176 aa3.49□□□□□ -1.85
NPM1-207ENST00000521260 ODF3BA8MYP8 253 aa3.48□□□□□ -1.85
NPM1-207ENST00000521260 H0Y9P7 68 aa3.48□□□□□ -1.85
NPM1-207ENST00000521260 IGHV4-59P01825 116 aa3.48□□□□□ -1.85
NPM1-207ENST00000521260 COX7A1P24310 79 aa3.48□□□□□ -1.85
NPM1-207ENST00000521260 LINC01006Q8NI28 216 aa3.48□□□□□ -1.85
NPM1-207ENST00000521260 ARHGAP32A7KAX9 2087 aa3.48□□□□□ -1.85
NPM1-207ENST00000521260 PRR14LQ5THK1 2151 aa3.47□□□□□ -1.85
NPM1-207ENST00000521260 MALRD1Q5VYJ5 2156 aa3.47□□□□□ -1.85
NPM1-207ENST00000521260 TRGV4A0A0C4DH28 118 aa3.47□□□□□ -1.85
NPM1-207ENST00000521260 IGHV3-11P01762 117 aa3.47□□□□□ -1.85
NPM1-207ENST00000521260 DEFB112Q30KQ8 113 aa3.47□□□□□ -1.85
NPM1-207ENST00000521260 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
NPM1-207ENST00000521260 C11orf71Q6IPW1 123 aa3.47□□□□□ -1.85
NPM1-207ENST00000521260 Q6YL49 198 aa3.47□□□□□ -1.85
NPM1-207ENST00000521260 COA5Q86WW8 74 aa3.47□□□□□ -1.85
NPM1-207ENST00000521260 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
NPM1-207ENST00000521260 PLAC8Q9NZF1 115 aa3.47□□□□□ -1.85
NPM1-207ENST00000521260 TNCP24821 2201 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 IGLV7-46A0A075B6I9 117 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 IGHV3OR16-13A0A075B7E8 117 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 IGHV3OR16-8A0A075B7F1 116 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 A0A096LNT2 108 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 IGHV3-74A0A0B4J1X5 117 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 IGHV4-28A0A0C4DH34 117 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 IGHV4-61A0A0C4DH41 118 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 FSHBP01225 129 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 LMO4P61968 165 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 RHPN1-AS1Q9BWJ2 59 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 ZNF702PQ9H963 129 aa3.46□□□□□ -1.86
NPM1-207ENST00000521260 IGLV6-57P01721 117 aa3.45□□□□□ -1.86
NPM1-207ENST00000521260 IGHV4-30-4P0DP06 118 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms