RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 LOC285095A0A1B0GVY8 99 aa0.38□□□□□ -2.35
SQLE-202ENST00000518604 PMCHL2Q9BQD1 86 aa0.38□□□□□ -2.35
SQLE-202ENST00000518604 NXT2Q9NPJ8 142 aaKnown RBP0.38□□□□□ -2.35
SQLE-202ENST00000518604 UQCR10Q9UDW1 63 aa0.38□□□□□ -2.35
SQLE-202ENST00000518604 ARL2-SNX15V9GYD0 113 aa0.38□□□□□ -2.35
SQLE-202ENST00000518604 KIAA1551Q9HCM1 1747 aa0.38□□□□□ -2.35
SQLE-202ENST00000518604 AHCTF1Q8WYP5 2266 aa0.38□□□□□ -2.35
SQLE-202ENST00000518604 CSMD3Q7Z407 3707 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 PLEKHH2Q8IVE3 1493 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 A0A0G2JND7 137 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 M0R3E3 92 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 APOC3P02656 99 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 COX6CP09669 75 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 KRTDAPP60985 99 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 TMEM170BQ5T4T1 132 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 SSBP3-AS1Q7Z2R9 100 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 SMIM4Q8WVI0 70 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 UBR1Q8IWV7 1749 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 NHSL1Q5SYE7 1610 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 ARHGEF12Q9NZN5 1544 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 C2CD3Q4AC94 2353 aa0.37□□□□□ -2.35
SQLE-202ENST00000518604 PDCD11Q14690 1871 aaKnown RBP0.36□□□□□ -2.35
SQLE-202ENST00000518604 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
SQLE-202ENST00000518604 ZNF815PA8K554 130 aa0.36□□□□□ -2.35
SQLE-202ENST00000518604 ATOX1O00244 68 aa0.36□□□□□ -2.35
SQLE-202ENST00000518604 PIN1P1O15428 100 aa0.36□□□□□ -2.35
SQLE-202ENST00000518604 ASIPP42127 132 aa0.36□□□□□ -2.35
SQLE-202ENST00000518604 COX17Q14061 63 aa0.36□□□□□ -2.35
SQLE-202ENST00000518604 SERP2Q8N6R1 65 aa0.36□□□□□ -2.35
SQLE-202ENST00000518604 LCN9Q8WX39 176 aa0.36□□□□□ -2.35
SQLE-202ENST00000518604 VAMP8Q9BV40 100 aa0.36□□□□□ -2.35
SQLE-202ENST00000518604 NPVFQ9HCQ7 196 aa0.36□□□□□ -2.35
SQLE-202ENST00000518604 CACFD1Q9UGQ2 172 aa0.36□□□□□ -2.35
SQLE-202ENST00000518604 DNAJC13O75165 2243 aa0.36□□□□□ -2.35
SQLE-202ENST00000518604 SPTBN2O15020 2390 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 PAPPA2Q9BXP8 1791 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 TULP4Q9NRJ4 1543 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 CACNA1EQ15878 2313 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 TRBV25-1A0A075B6N4 114 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 SYS1-DBNDD2H3BUS1 97 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 I3L2K1 104 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 BCE1O60756 84 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 LINC00032P0C843 101 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 SAA2P0DJI9 122 aaPredicted RBP0.35□□□□□ -2.35
SQLE-202ENST00000518604 Q6JHZ5 121 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 UBE2DNLQ8IWF7 75 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 TRGV9Q99603 122 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 C20orf78Q9BR46 151 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 FAIMQ9NVQ4 179 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 AP4S1Q9Y587 144 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 TPRP12270 2363 aaKnown RBP0.35□□□□□ -2.35
SQLE-202ENST00000518604 CEP162Q5TB80 1403 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 CHD9Q3L8U1 2897 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 POLA1P09884 1462 aaPredicted RBP0.35□□□□□ -2.35
SQLE-202ENST00000518604 C1orf167Q5SNV9 1468 aa0.35□□□□□ -2.35
SQLE-202ENST00000518604 A0A087WVE0 104 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 NDUFC1O43677 76 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 MGPP08493 103 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 TRAPPC2P0DI81 140 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 TRAPPC2BP0DI82 140 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 C10orf113Q5VZT2 155 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 C9orf62Q8N4C0 152 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 RB1CC1Q8TDY2 1594 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 CELSR2Q9HCU4 2923 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 MYO3AQ8NEV4 1616 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 FANCAO15360 1455 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 MED14O60244 1454 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 NLRP1Q9C000 1473 aa0.34□□□□□ -2.36
SQLE-202ENST00000518604 CLTCQ00610 1675 aaKnown RBP0.33□□□□□ -2.36
SQLE-202ENST00000518604 PLCE1Q9P212 2302 aa0.33□□□□□ -2.36
SQLE-202ENST00000518604 EPRSP07814 1512 aaKnown RBP0.33□□□□□ -2.36
SQLE-202ENST00000518604 HAMPP81172 84 aa0.33□□□□□ -2.36
SQLE-202ENST00000518604 TMEM263Q8WUH6 116 aaKnown RBP0.33□□□□□ -2.36
SQLE-202ENST00000518604 HIGD1BQ9P298 99 aa0.33□□□□□ -2.36
SQLE-202ENST00000518604 TARBP1Q13395 1621 aaKnown RBP0.33□□□□□ -2.36
SQLE-202ENST00000518604 ZNF292O60281 2723 aa0.33□□□□□ -2.36
SQLE-202ENST00000518604 SHPRHQ149N8 1683 aa0.33□□□□□ -2.36
SQLE-202ENST00000518604 PIEZO2Q9H5I5 2752 aa0.33□□□□□ -2.36
SQLE-202ENST00000518604 ABCC3O15438 1527 aa0.33□□□□□ -2.36
SQLE-202ENST00000518604 XRN1Q8IZH2 1706 aaKnown RBP0.33□□□□□ -2.36
SQLE-202ENST00000518604 ERCC6L2Q5T890 1561 aa0.32□□□□□ -2.36
SQLE-202ENST00000518604 BAZ1AQ9NRL2 1556 aaPredicted RBP0.32□□□□□ -2.36
SQLE-202ENST00000518604 PAPPAQ13219 1627 aa0.32□□□□□ -2.36
SQLE-202ENST00000518604 BIVM-ERCC5R4GMW8 1640 aa0.32□□□□□ -2.36
SQLE-202ENST00000518604 GOLGA4Q13439 2230 aaKnown RBP0.32□□□□□ -2.36
SQLE-202ENST00000518604 GNG2P59768 71 aa0.32□□□□□ -2.36
SQLE-202ENST00000518604 FDCSPQ8NFU4 85 aa0.32□□□□□ -2.36
SQLE-202ENST00000518604 LINC00846Q9NV44 126 aa0.32□□□□□ -2.36
SQLE-202ENST00000518604 GPR98Q8WXG9 6306 aa0.32□□□□□ -2.36
SQLE-202ENST00000518604 LRP1Q07954 4544 aaKnown RBP0.31□□□□□ -2.36
SQLE-202ENST00000518604 ATP10BO94823 1461 aa0.31□□□□□ -2.36
SQLE-202ENST00000518604 KNDC1Q76NI1 1749 aa0.31□□□□□ -2.36
SQLE-202ENST00000518604 GVINP1Q7Z2Y8 2422 aa0.31□□□□□ -2.36
SQLE-202ENST00000518604 FAUP35544 74 aaKnown RBP0.31□□□□□ -2.36
SQLE-202ENST00000518604 LINC01600Q96MT4 127 aa0.31□□□□□ -2.36
SQLE-202ENST00000518604 CNFNQ9BYD5 112 aa0.31□□□□□ -2.36
SQLE-202ENST00000518604 TNCP24821 2201 aa0.31□□□□□ -2.36
SQLE-202ENST00000518604 SLIT1O75093 1534 aa0.31□□□□□ -2.36
SQLE-202ENST00000518604 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
SQLE-202ENST00000518604 RGPD4Q7Z3J3 1758 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms