RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 GAGE12IP0CL82 117 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 GAGE4Q13068 117 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 C3orf56Q8N813 242 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 CHCHD7Q9BUK0 85 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 IMUPQ9GZP8 106 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 C19orf73Q9NVV2 129 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 XCL2Q9UBD3 114 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 IGHV3-64A0A075B6Q5 118 aa13.14□□□□□ -0.31
SDC2-202ENST00000518385 IGHV3-53P01767 116 aa13.14□□□□□ -0.31
SDC2-202ENST00000518385 HERVK_113P63121 156 aa13.13□□□□□ -0.31
SDC2-202ENST00000518385 SHISA2Q6UWI4 295 aa13.13□□□□□ -0.31
SDC2-202ENST00000518385 C1orf158Q8N1D5 194 aa13.13□□□□□ -0.31
SDC2-202ENST00000518385 C15orf53Q8NAA6 179 aa13.13□□□□□ -0.31
SDC2-202ENST00000518385 FBN1P35555 2871 aaKnown RBP13.13□□□□□ -0.31
SDC2-202ENST00000518385 WFDC9Q8NEX5 89 aa13.12□□□□□ -0.31
SDC2-202ENST00000518385 SPATA3Q8NHX4 192 aa13.12□□□□□ -0.31
SDC2-202ENST00000518385 TRBV7-7A0A0K0K1E9 115 aa13.11□□□□□ -0.31
SDC2-202ENST00000518385 TRAV4A0A0B4J268 109 aa13.11□□□□□ -0.31
SDC2-202ENST00000518385 TEX49A0A1B0GTD5 131 aa13.11□□□□□ -0.31
SDC2-202ENST00000518385 NHLRC4P0CG21 123 aaPredicted RBP13.11□□□□□ -0.31
SDC2-202ENST00000518385 C9orf66Q5T8R8 295 aa13.11□□□□□ -0.31
SDC2-202ENST00000518385 IL17DQ8TAD2 202 aa13.11□□□□□ -0.31
SDC2-202ENST00000518385 CSDC2Q9Y534 153 aaKnown RBP13.11□□□□□ -0.31
SDC2-202ENST00000518385 IGLV5-39A0A0G2JS06 123 aa13.1□□□□□ -0.31
SDC2-202ENST00000518385 RS1O15537 224 aa13.1□□□□□ -0.31
SDC2-202ENST00000518385 ADAMTSL4-AS1Q5T5F5 129 aa13.1□□□□□ -0.31
SDC2-202ENST00000518385 TRAV8-3A0A0A6YYJ7 113 aa13.09□□□□□ -0.31
SDC2-202ENST00000518385 HERV-K104P63124 156 aa13.09□□□□□ -0.31
SDC2-202ENST00000518385 DEFB104AQ8WTQ1 72 aa13.08□□□□□ -0.32
SDC2-202ENST00000518385 COX7A2LO14548 114 aa13.07□□□□□ -0.32
SDC2-202ENST00000518385 TRACP01848 142 aa13.07□□□□□ -0.32
SDC2-202ENST00000518385 TMEM101Q96IK0 257 aa13.07□□□□□ -0.32
SDC2-202ENST00000518385 TRBV10-1A0A0K0K1A3 114 aa13.06□□□□□ -0.32
SDC2-202ENST00000518385 GIG44P09565 113 aaPredicted RBP13.06□□□□□ -0.32
SDC2-202ENST00000518385 DAZ2Q13117 558 aaKnown RBP13.06□□□□□ -0.32
SDC2-202ENST00000518385 DGAT2L7PQ6IED9 249 aa13.06□□□□□ -0.32
SDC2-202ENST00000518385 C16orf74Q96GX8 76 aa13.06□□□□□ -0.32
SDC2-202ENST00000518385 OVOL2Q9BRP0 275 aa13.06□□□□□ -0.32
SDC2-202ENST00000518385 ATP5G1P05496 136 aa13.05□□□□□ -0.32
SDC2-202ENST00000518385 PRM2P04554 102 aa13.04□□□□□ -0.32
SDC2-202ENST00000518385 FAM222AQ5U5X8 452 aa13.04□□□□□ -0.32
SDC2-202ENST00000518385 LINC00308Q8TCZ7 52 aa13.04□□□□□ -0.32
SDC2-202ENST00000518385 IGHV3OR16-12A0A075B7B8 117 aa13.03□□□□□ -0.32
SDC2-202ENST00000518385 CSNK1G2-AS1Q8NCQ2 148 aa13.03□□□□□ -0.32
SDC2-202ENST00000518385 WIPF1O43516 503 aa13.03□□□□□ -0.32
SDC2-202ENST00000518385 RPL35AP18077 110 aaKnown RBP13.03□□□□□ -0.32
SDC2-202ENST00000518385 CDKN2A-AS1Q9UH64 79 aa13.03□□□□□ -0.32
SDC2-202ENST00000518385 VWFP04275 2813 aa13.02□□□□□ -0.32
SDC2-202ENST00000518385 B5MCH6 92 aa13.01□□□□□ -0.33
SDC2-202ENST00000518385 DAZ4Q86SG3 579 aaKnown RBP13.01□□□□□ -0.33
SDC2-202ENST00000518385 TMEM126AQ9H061 195 aa13.01□□□□□ -0.33
SDC2-202ENST00000518385 WFDC10AQ9H1F0 79 aa13.01□□□□□ -0.33
SDC2-202ENST00000518385 DAZ3Q9NR90 486 aaKnown RBP13.01□□□□□ -0.33
SDC2-202ENST00000518385 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13□□□□□ -0.33
SDC2-202ENST00000518385 TRGV1A0A0A0MS02 117 aa13□□□□□ -0.33
SDC2-202ENST00000518385 IGHV3-73A0A0B4J1V6 119 aa13□□□□□ -0.33
SDC2-202ENST00000518385 IGKV2-29A2NJV5 120 aaPredicted RBP13□□□□□ -0.33
SDC2-202ENST00000518385 INAFM2P0DMQ5 153 aa13□□□□□ -0.33
SDC2-202ENST00000518385 CEMP1Q6PRD7 247 aaPredicted RBP13□□□□□ -0.33
SDC2-202ENST00000518385 LINC00643Q86TS7 51 aa13□□□□□ -0.33
SDC2-202ENST00000518385 DAND5Q8N907 189 aa13□□□□□ -0.33
SDC2-202ENST00000518385 CLEC2BQ92478 149 aa13□□□□□ -0.33
SDC2-202ENST00000518385 STAB1Q9NY15 2570 aa12.99□□□□□ -0.33
SDC2-202ENST00000518385 NOTCH3Q9UM47 2321 aa12.99□□□□□ -0.33
SDC2-202ENST00000518385 COL6A5A8TX70 2615 aa12.98□□□□□ -0.33
SDC2-202ENST00000518385 CXCL5P42830 114 aa12.98□□□□□ -0.33
SDC2-202ENST00000518385 RPL36AP83881 106 aaKnown RBP12.98□□□□□ -0.33
SDC2-202ENST00000518385 RPL36ALQ969Q0 106 aaKnown RBP12.98□□□□□ -0.33
SDC2-202ENST00000518385 Q9H8V8 135 aa12.98□□□□□ -0.33
SDC2-202ENST00000518385 TRRAPQ9Y4A5 3859 aa12.97□□□□□ -0.33
SDC2-202ENST00000518385 TRAV13-2A0A0B4J235 113 aa12.97□□□□□ -0.33
SDC2-202ENST00000518385 LINC00242Q5T6M2 205 aa12.97□□□□□ -0.33
SDC2-202ENST00000518385 SDIM1Q6ZPB5 146 aa12.97□□□□□ -0.33
SDC2-202ENST00000518385 Q6ZSN1 163 aa12.97□□□□□ -0.33
SDC2-202ENST00000518385 SS18L2Q9UHA2 77 aa12.97□□□□□ -0.33
SDC2-202ENST00000518385 NACAE9PAV3 2078 aa12.97□□□□□ -0.33
SDC2-202ENST00000518385 SMIM9A6NGZ8 99 aa12.96□□□□□ -0.33
SDC2-202ENST00000518385 ZNF625Q96I27 306 aaPredicted RBP12.96□□□□□ -0.33
SDC2-202ENST00000518385 PLAC8L1A1L4L8 177 aa12.95□□□□□ -0.34
SDC2-202ENST00000518385 SMIM1B2RUZ4 78 aa12.95□□□□□ -0.34
SDC2-202ENST00000518385 MDFIQ99750 246 aa12.95□□□□□ -0.34
SDC2-202ENST00000518385 NOP10Q9NPE3 64 aaKnown RBP12.95□□□□□ -0.34
SDC2-202ENST00000518385 RNASE13Q5GAN3 156 aaKnown RBP12.94□□□□□ -0.34
SDC2-202ENST00000518385 Q6ZTI0 123 aa12.94□□□□□ -0.34
SDC2-202ENST00000518385 KIR2DL5BQ8NHK3 375 aa12.94□□□□□ -0.34
SDC2-202ENST00000518385 CCDC179H3BU77 68 aa12.94□□□□□ -0.34
SDC2-202ENST00000518385 K7EQD1 137 aa12.93□□□□□ -0.34
SDC2-202ENST00000518385 RPL28P46779 137 aaKnown RBP12.92□□□□□ -0.34
SDC2-202ENST00000518385 OXLD1Q5BKU9 147 aa12.92□□□□□ -0.34
SDC2-202ENST00000518385 MEIG1Q5JSS6 88 aa12.92□□□□□ -0.34
SDC2-202ENST00000518385 A8MZ25 164 aa12.91□□□□□ -0.34
SDC2-202ENST00000518385 NPC2P61916 151 aa12.91□□□□□ -0.34
SDC2-202ENST00000518385 TRGV2A0A075B6R0 118 aa12.9□□□□□ -0.35
SDC2-202ENST00000518385 TRBV6-4A0A1B0GX49 114 aa12.9□□□□□ -0.35
SDC2-202ENST00000518385 APOC4P55056 127 aa12.9□□□□□ -0.35
SDC2-202ENST00000518385 COX6A2Q02221 97 aa12.9□□□□□ -0.35
SDC2-202ENST00000518385 CDC42SE2Q9NRR3 84 aa12.9□□□□□ -0.35
SDC2-202ENST00000518385 F5H768 121 aa12.89□□□□□ -0.35
SDC2-202ENST00000518385 H0YGX0 51 aa12.89□□□□□ -0.35
SDC2-202ENST00000518385 BAALC-AS2P0C853 105 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms