RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 M0QXV9 152 aa3.69□□□□□ -1.82
PABPC1-204ENST00000517990 ARPC5O15511 151 aa3.69□□□□□ -1.82
PABPC1-204ENST00000517990 PDE6DO43924 150 aa3.69□□□□□ -1.82
PABPC1-204ENST00000517990 FCER1GP30273 86 aa3.69□□□□□ -1.82
PABPC1-204ENST00000517990 TMEM242Q9NWH2 141 aa3.69□□□□□ -1.82
PABPC1-204ENST00000517990 CSDC2Q9Y534 153 aaKnown RBP3.69□□□□□ -1.82
PABPC1-204ENST00000517990 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 NUPR1O60356 82 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 ZNF861PO60384 105 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 PPP1R17O96001 155 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 TSHBP01222 138 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 TLX1NBP0CAT3 122 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 GAGE2EQ4V326 116 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 Q5BKY6 102 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 C5orf38Q86SI9 138 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 TYMSOSQ8TAI1 123 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 ORAOV1Q8WV07 137 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 RPP21Q9H633 154 aaKnown RBP3.68□□□□□ -1.82
PABPC1-204ENST00000517990 GNG13Q9P2W3 67 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 GAGE2DQ9UEU5 116 aa3.68□□□□□ -1.82
PABPC1-204ENST00000517990 FAM168BA1KXE4 195 aa3.67□□□□□ -1.82
PABPC1-204ENST00000517990 RAB19A4D1S5 217 aa3.67□□□□□ -1.82
PABPC1-204ENST00000517990 VCYO14598 125 aa3.67□□□□□ -1.82
PABPC1-204ENST00000517990 CRYGAP11844 174 aa3.67□□□□□ -1.82
PABPC1-204ENST00000517990 KIR2DL4Q99706 377 aa3.67□□□□□ -1.82
PABPC1-204ENST00000517990 CYTL1Q9NRR1 136 aa3.67□□□□□ -1.82
PABPC1-204ENST00000517990 MED9Q9NWA0 146 aa3.67□□□□□ -1.82
PABPC1-204ENST00000517990 TRBV27A0A0K0K1C4 114 aa3.66□□□□□ -1.82
PABPC1-204ENST00000517990 KANTRA0A1W2PQU2 76 aa3.66□□□□□ -1.82
PABPC1-204ENST00000517990 TCAPO15273 167 aa3.66□□□□□ -1.82
PABPC1-204ENST00000517990 TAGLN2P37802 199 aaKnown RBP3.66□□□□□ -1.82
PABPC1-204ENST00000517990 RPL28P46779 137 aaKnown RBP3.66□□□□□ -1.82
PABPC1-204ENST00000517990 LINC01547P58512 204 aaPredicted RBP3.66□□□□□ -1.82
PABPC1-204ENST00000517990 ZNF345Q14585 488 aa3.66□□□□□ -1.82
PABPC1-204ENST00000517990 LBHQ53QV2 105 aaPredicted RBP3.66□□□□□ -1.82
PABPC1-204ENST00000517990 PACRGQ96M98 296 aaPredicted RBP3.66□□□□□ -1.82
PABPC1-204ENST00000517990 SMDT1Q9H4I9 107 aa3.66□□□□□ -1.82
PABPC1-204ENST00000517990 TRBV30A0A0K0K1B3 111 aa3.65□□□□□ -1.83
PABPC1-204ENST00000517990 A8MWL6 223 aa3.65□□□□□ -1.83
PABPC1-204ENST00000517990 NDUFC2-KCTD14E9PQ53 114 aa3.65□□□□□ -1.83
PABPC1-204ENST00000517990 PPP1R2P9O14990 202 aa3.65□□□□□ -1.83
PABPC1-204ENST00000517990 POLR2KP53803 58 aaKnown RBP3.65□□□□□ -1.83
PABPC1-204ENST00000517990 TPRXLQ17RH7 258 aa3.65□□□□□ -1.83
PABPC1-204ENST00000517990 RNASE13Q5GAN3 156 aaKnown RBP3.65□□□□□ -1.83
PABPC1-204ENST00000517990 TIMM21Q9BVV7 248 aa3.65□□□□□ -1.83
PABPC1-204ENST00000517990 RNASE7Q9H1E1 156 aaKnown RBP3.65□□□□□ -1.83
PABPC1-204ENST00000517990 UBE2D4Q9Y2X8 147 aa3.65□□□□□ -1.83
PABPC1-204ENST00000517990 TRBV20OR9-2A0A075B6H5 130 aa3.64□□□□□ -1.83
PABPC1-204ENST00000517990 IGLV7-46A0A075B6I9 117 aa3.64□□□□□ -1.83
PABPC1-204ENST00000517990 TGIF2-C20orf24A0A0A6YYL0 155 aa3.64□□□□□ -1.83
PABPC1-204ENST00000517990 GATCO43716 136 aaKnown RBP3.64□□□□□ -1.83
PABPC1-204ENST00000517990 FOXA3P55318 350 aaPredicted RBP3.64□□□□□ -1.83
PABPC1-204ENST00000517990 CTAG1AP78358 180 aa3.64□□□□□ -1.83
PABPC1-204ENST00000517990 UNQ6190/PRO20217Q6UXQ8 127 aa3.64□□□□□ -1.83
PABPC1-204ENST00000517990 LINC00173Q6ZV60 143 aa3.64□□□□□ -1.83
PABPC1-204ENST00000517990 KRTAP11-1Q8IUC1 163 aa3.64□□□□□ -1.83
PABPC1-204ENST00000517990 TMEM191AQ9H0A3 160 aa3.64□□□□□ -1.83
PABPC1-204ENST00000517990 C6orf48Q9UBA6 75 aa3.64□□□□□ -1.83
PABPC1-204ENST00000517990 IGHV3OR16-9A0A0B4J2B5 98 aa3.63□□□□□ -1.83
PABPC1-204ENST00000517990 A0A1B0GUT8 65 aa3.63□□□□□ -1.83
PABPC1-204ENST00000517990 SUMO2P61956 95 aaKnown RBP3.63□□□□□ -1.83
PABPC1-204ENST00000517990 HBBP68871 147 aa3.63□□□□□ -1.83
PABPC1-204ENST00000517990 CT83Q5H943 113 aa3.63□□□□□ -1.83
PABPC1-204ENST00000517990 Q6ZUT4 128 aa3.63□□□□□ -1.83
PABPC1-204ENST00000517990 LINC00304Q8N9R0 145 aa3.63□□□□□ -1.83
PABPC1-204ENST00000517990 CTDSP1Q9GZU7 261 aa3.63□□□□□ -1.83
PABPC1-204ENST00000517990 SPANXA1Q9NS26 97 aa3.63□□□□□ -1.83
PABPC1-204ENST00000517990 CRCT1Q9UGL9 99 aa3.63□□□□□ -1.83
PABPC1-204ENST00000517990 A0A087X002 238 aa3.62□□□□□ -1.83
PABPC1-204ENST00000517990 IGKV2D-26A0A0A0MRZ7 120 aa3.62□□□□□ -1.83
PABPC1-204ENST00000517990 IFITM10A6NMD0 228 aa3.62□□□□□ -1.83
PABPC1-204ENST00000517990 BCE1O60756 84 aa3.62□□□□□ -1.83
PABPC1-204ENST00000517990 PRSS2P07478 247 aa3.62□□□□□ -1.83
PABPC1-204ENST00000517990 RAB4AP20338 218 aa3.62□□□□□ -1.83
PABPC1-204ENST00000517990 C10orf25Q5T742 122 aa3.62□□□□□ -1.83
PABPC1-204ENST00000517990 LINC00337Q8N6G1 96 aa3.62□□□□□ -1.83
PABPC1-204ENST00000517990 OCC1Q8TAD7 63 aa3.62□□□□□ -1.83
PABPC1-204ENST00000517990 RETNLBQ9BQ08 111 aa3.62□□□□□ -1.83
PABPC1-204ENST00000517990 HMSDA8MTL9 139 aa3.61□□□□□ -1.83
PABPC1-204ENST00000517990 ZNF727A8MUV8 499 aa3.61□□□□□ -1.83
PABPC1-204ENST00000517990 K7EN84 100 aa3.61□□□□□ -1.83
PABPC1-204ENST00000517990 CKS1BP61024 79 aa3.61□□□□□ -1.83
PABPC1-204ENST00000517990 MRPS36P82909 103 aaKnown RBP3.61□□□□□ -1.83
PABPC1-204ENST00000517990 RIGQ13278 110 aa3.61□□□□□ -1.83
PABPC1-204ENST00000517990 FAM229BQ4G0N7 80 aa3.61□□□□□ -1.83
PABPC1-204ENST00000517990 FAM231DQ6ZW35 169 aa3.61□□□□□ -1.83
PABPC1-204ENST00000517990 AMN1Q8IY45 258 aa3.61□□□□□ -1.83
PABPC1-204ENST00000517990 TP73-AS1Q9UF72 201 aa3.61□□□□□ -1.83
PABPC1-204ENST00000517990 C22orf24Q9Y442 160 aa3.61□□□□□ -1.83
PABPC1-204ENST00000517990 LINC00862A6NCI5 91 aa3.6□□□□□ -1.83
PABPC1-204ENST00000517990 HIGD1CA8MV81 97 aa3.6□□□□□ -1.83
PABPC1-204ENST00000517990 IFI27P40305 119 aaPredicted RBP3.6□□□□□ -1.83
PABPC1-204ENST00000517990 UBE2AP49459 152 aa3.6□□□□□ -1.83
PABPC1-204ENST00000517990 C9orf129Q5T035 196 aaKnown RBP3.6□□□□□ -1.83
PABPC1-204ENST00000517990 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
PABPC1-204ENST00000517990 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
PABPC1-204ENST00000517990 KRTAP7-1Q8IUC3 87 aa3.6□□□□□ -1.83
PABPC1-204ENST00000517990 C20orf78Q9BR46 151 aa3.6□□□□□ -1.83
PABPC1-204ENST00000517990 C2orf88Q9BSF0 95 aa3.6□□□□□ -1.83
PABPC1-204ENST00000517990 PPDPFQ9H3Y8 114 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms