RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 MKI67P46013 3256 aaKnown RBP-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 IGLV5-48A0A075B6I7 105 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 TRAV13-1A0A0B4J241 112 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 H3BMG7 143 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 HMGB3O15347 200 aaKnown RBP-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 S100A6P06703 90 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 CCL8P80075 99 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 SCGB2B2Q4G0G5 96 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 LINC01545Q5VT33 79 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 LINC00305Q7Z4B0 112 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 AGPAT3Q9NRZ7 376 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 UHRF1BP1Q6BDS2 1440 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 UHRF1BP1LA0JNW5 1464 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 ZNF831Q5JPB2 1677 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 LRRC37AA6NMS7 1700 aa-4.32□□□□□ -3.1
SNORA40.16-201ENST00000517238 RIIAD1A6NNX1 92 aa-4.33□□□□□ -3.1
SNORA40.16-201ENST00000517238 APOEP02649 317 aa-4.33□□□□□ -3.1
SNORA40.16-201ENST00000517238 HIST1H1BP16401 226 aaKnown RBP-4.33□□□□□ -3.1
SNORA40.16-201ENST00000517238 SDC2P34741 201 aa-4.33□□□□□ -3.1
SNORA40.16-201ENST00000517238 MYOZ3Q8TDC0 251 aa-4.33□□□□□ -3.1
SNORA40.16-201ENST00000517238 BORCS8Q96FH0 119 aa-4.33□□□□□ -3.1
SNORA40.16-201ENST00000517238 EIF3AQ14152 1382 aaKnown RBP-4.33□□□□□ -3.1
SNORA40.16-201ENST00000517238 ATAD2BQ9ULI0 1458 aa-4.33□□□□□ -3.1
SNORA40.16-201ENST00000517238 DIP2CQ9Y2E4 1556 aa-4.33□□□□□ -3.1
SNORA40.16-201ENST00000517238 PIK3C2GO75747 1445 aa-4.34□□□□□ -3.1
SNORA40.16-201ENST00000517238 EDC4Q6P2E9 1401 aaKnown RBP-4.34□□□□□ -3.1
SNORA40.16-201ENST00000517238 H0YIV9 168 aa-4.34□□□□□ -3.1
SNORA40.16-201ENST00000517238 SMLR1H3BR10 107 aa-4.34□□□□□ -3.1
SNORA40.16-201ENST00000517238 DCTN3O75935 186 aa-4.34□□□□□ -3.1
SNORA40.16-201ENST00000517238 APOA2P02652 100 aa-4.34□□□□□ -3.1
SNORA40.16-201ENST00000517238 IGLC1P0CG04 106 aa-4.34□□□□□ -3.1
SNORA40.16-201ENST00000517238 SPANXN1Q5VSR9 72 aa-4.34□□□□□ -3.1
SNORA40.16-201ENST00000517238 NUP35Q8NFH5 326 aa-4.34□□□□□ -3.1
SNORA40.16-201ENST00000517238 NIPSNAP2O75323 286 aa-4.35□□□□□ -3.11
SNORA40.16-201ENST00000517238 RPL7P18124 248 aaKnown RBP-4.35□□□□□ -3.11
SNORA40.16-201ENST00000517238 V9GYQ6 96 aa-4.35□□□□□ -3.11
SNORA40.16-201ENST00000517238 NWD2Q9ULI1 1742 aa-4.35□□□□□ -3.11
SNORA40.16-201ENST00000517238 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-4.36□□□□□ -3.11
SNORA40.16-201ENST00000517238 UQCRQO14949 82 aa-4.36□□□□□ -3.11
SNORA40.16-201ENST00000517238 NDUFC2O95298 119 aa-4.36□□□□□ -3.11
SNORA40.16-201ENST00000517238 C3orf79P0CE67 100 aa-4.36□□□□□ -3.11
SNORA40.16-201ENST00000517238 SPART-AS1P0CW21 52 aa-4.36□□□□□ -3.11
SNORA40.16-201ENST00000517238 LINC00158P58513 81 aa-4.36□□□□□ -3.11
SNORA40.16-201ENST00000517238 AQP10Q96PS8 301 aa-4.36□□□□□ -3.11
SNORA40.16-201ENST00000517238 MGST2Q99735 147 aa-4.36□□□□□ -3.11
SNORA40.16-201ENST00000517238 PDCD11Q14690 1871 aaKnown RBP-4.37□□□□□ -3.11
SNORA40.16-201ENST00000517238 MT-ATP8P03928 68 aa-4.37□□□□□ -3.11
SNORA40.16-201ENST00000517238 SLC25A5P05141 298 aaKnown RBP-4.37□□□□□ -3.11
SNORA40.16-201ENST00000517238 CCL2P13500 99 aa-4.37□□□□□ -3.11
SNORA40.16-201ENST00000517238 GALP22466 123 aa-4.37□□□□□ -3.11
SNORA40.16-201ENST00000517238 GPATCH11Q8N954 259 aa-4.37□□□□□ -3.11
SNORA40.16-201ENST00000517238 PAIP2Q9BPZ3 127 aaKnown RBP-4.37□□□□□ -3.11
SNORA40.16-201ENST00000517238 FGFR1OP2Q9NVK5 253 aa-4.37□□□□□ -3.11
SNORA40.16-201ENST00000517238 ANKRD36CQ5JPF3 1778 aa-4.37□□□□□ -3.11
SNORA40.16-201ENST00000517238 SHROOM2Q13796 1616 aa-4.38□□□□□ -3.11
SNORA40.16-201ENST00000517238 PLXNC1O60486 1568 aa-4.38□□□□□ -3.11
SNORA40.16-201ENST00000517238 TRBV7-7A0A0K0K1E9 115 aa-4.38□□□□□ -3.11
SNORA40.16-201ENST00000517238 M0QZ92 97 aa-4.38□□□□□ -3.11
SNORA40.16-201ENST00000517238 M0QZK8 103 aa-4.38□□□□□ -3.11
SNORA40.16-201ENST00000517238 HLA-DRB4P13762 266 aa-4.38□□□□□ -3.11
SNORA40.16-201ENST00000517238 UBE2L3P68036 154 aaKnown RBP-4.38□□□□□ -3.11
SNORA40.16-201ENST00000517238 WHAMMP3Q1A5X7 153 aa-4.38□□□□□ -3.11
SNORA40.16-201ENST00000517238 OGFRL1Q5TC84 451 aaPredicted RBP-4.38□□□□□ -3.11
SNORA40.16-201ENST00000517238 PRELID3BQ9Y3B1 194 aa-4.38□□□□□ -3.11
SNORA40.16-201ENST00000517238 HLA-DRB4X5D2U9 266 aa-4.38□□□□□ -3.11
SNORA40.16-201ENST00000517238 MAPKBP1O60336 1514 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 TRDV1A0A1B0GX56 115 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 HMGN4O00479 90 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 RBP4P02753 201 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 DEFB130BP0DP73 79 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 DEFB130AP0DP74 79 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 CBLN1P23435 193 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 C6orf201Q7Z4U5 140 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 MMGT1Q8N4V1 131 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 SH3BGRL3Q9H299 93 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 DYNLRB1Q9NP97 96 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 PLEKHJ1Q9NW61 149 aa-4.39□□□□□ -3.11
SNORA40.16-201ENST00000517238 LOC100506127A0A0U1RQW1 187 aa-4.4□□□□□ -3.11
SNORA40.16-201ENST00000517238 GABARAPH6UMI1 98 aa-4.4□□□□□ -3.11
SNORA40.16-201ENST00000517238 H7C1C5 153 aa-4.4□□□□□ -3.11
SNORA40.16-201ENST00000517238 LCN6P62502 163 aa-4.4□□□□□ -3.11
SNORA40.16-201ENST00000517238 SKP1P63208 163 aa-4.4□□□□□ -3.11
SNORA40.16-201ENST00000517238 KIF27Q86VH2 1401 aa-4.4□□□□□ -3.11
SNORA40.16-201ENST00000517238 SMARCA2P51531 1590 aa-4.4□□□□□ -3.11
SNORA40.16-201ENST00000517238 TMEM213A2RRL7 107 aa-4.41□□□□□ -3.12
SNORA40.16-201ENST00000517238 HIST1H1EP10412 219 aaKnown RBP-4.41□□□□□ -3.12
SNORA40.16-201ENST00000517238 S100A7L2Q5SY68 101 aa-4.41□□□□□ -3.12
SNORA40.16-201ENST00000517238 MRPL54Q6P161 138 aaKnown RBP-4.41□□□□□ -3.12
SNORA40.16-201ENST00000517238 DPH3Q96FX2 82 aa-4.41□□□□□ -3.12
SNORA40.16-201ENST00000517238 NXT2Q9NPJ8 142 aaKnown RBP-4.41□□□□□ -3.12
SNORA40.16-201ENST00000517238 USE1Q9NZ43 259 aa-4.41□□□□□ -3.12
SNORA40.16-201ENST00000517238 TOGARAM1Q9Y4F4 1720 aa-4.41□□□□□ -3.12
SNORA40.16-201ENST00000517238 ADGBQ8N7X0 1667 aa-4.41□□□□□ -3.12
SNORA40.16-201ENST00000517238 COX5BP10606 129 aa-4.42□□□□□ -3.12
SNORA40.16-201ENST00000517238 PPP1R2P41236 205 aa-4.42□□□□□ -3.12
SNORA40.16-201ENST00000517238 DAPK1P53355 1430 aa-4.42□□□□□ -3.12
SNORA40.16-201ENST00000517238 SNRNP25Q9BV90 132 aaKnown RBP-4.42□□□□□ -3.12
SNORA40.16-201ENST00000517238 SEC11CQ9BY50 192 aa-4.42□□□□□ -3.12
SNORA40.16-201ENST00000517238 MAST1Q9Y2H9 1570 aa-4.42□□□□□ -3.12
SNORA40.16-201ENST00000517238 CFAP47Q6ZTR5 3102 aa-4.42□□□□□ -3.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms