RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 KDM5AP29375 1690 aaKnown RBP-1□□□□□ -2.57
RNU6-1028P-201ENST00000517164 CHKB-CPT1BH3BT56 60 aa-1.01□□□□□ -2.57
RNU6-1028P-201ENST00000517164 K7EP13 123 aa-1.01□□□□□ -2.57
RNU6-1028P-201ENST00000517164 S100A12P80511 92 aa-1.01□□□□□ -2.57
RNU6-1028P-201ENST00000517164 KRTAP19-7Q3SYF9 63 aa-1.01□□□□□ -2.57
RNU6-1028P-201ENST00000517164 POLA1P09884 1462 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-1028P-201ENST00000517164 SHROOM2Q13796 1616 aa-1.01□□□□□ -2.57
RNU6-1028P-201ENST00000517164 MGPP08493 103 aa-1.02□□□□□ -2.57
RNU6-1028P-201ENST00000517164 SETXQ7Z333 2677 aaKnown RBP-1.02□□□□□ -2.57
RNU6-1028P-201ENST00000517164 MYOZ3Q8TDC0 251 aa-1.02□□□□□ -2.57
RNU6-1028P-201ENST00000517164 TMEM263Q8WUH6 116 aaKnown RBP-1.02□□□□□ -2.57
RNU6-1028P-201ENST00000517164 ARHGEF5Q12774 1597 aa-1.03□□□□□ -2.57
RNU6-1028P-201ENST00000517164 OOSP1A8MZH6 123 aa-1.03□□□□□ -2.57
RNU6-1028P-201ENST00000517164 NEBP20929 6669 aa-1.03□□□□□ -2.57
RNU6-1028P-201ENST00000517164 QRICH2Q9H0J4 1663 aa-1.04□□□□□ -2.58
RNU6-1028P-201ENST00000517164 IGLC1P0CG04 106 aa-1.04□□□□□ -2.58
RNU6-1028P-201ENST00000517164 SPRR4Q96PI1 79 aa-1.04□□□□□ -2.58
RNU6-1028P-201ENST00000517164 FXYD6Q9H0Q3 95 aa-1.04□□□□□ -2.58
RNU6-1028P-201ENST00000517164 NXT2Q9NPJ8 142 aaKnown RBP-1.04□□□□□ -2.58
RNU6-1028P-201ENST00000517164 GAPVD1Q14C86 1478 aa-1.05□□□□□ -2.58
RNU6-1028P-201ENST00000517164 AKAIN1P0CW23 69 aa-1.05□□□□□ -2.58
RNU6-1028P-201ENST00000517164 C10orf113Q5VZT2 155 aa-1.05□□□□□ -2.58
RNU6-1028P-201ENST00000517164 CDC42SE2Q9NRR3 84 aa-1.05□□□□□ -2.58
RNU6-1028P-201ENST00000517164 BSNQ9UPA5 3926 aa-1.05□□□□□ -2.58
RNU6-1028P-201ENST00000517164 DNAJC13O75165 2243 aa-1.05□□□□□ -2.58
RNU6-1028P-201ENST00000517164 FAIMQ9NVQ4 179 aa-1.06□□□□□ -2.58
RNU6-1028P-201ENST00000517164 TULP4Q9NRJ4 1543 aa-1.06□□□□□ -2.58
RNU6-1028P-201ENST00000517164 PP6455Q8WZ26 134 aa-1.07□□□□□ -2.58
RNU6-1028P-201ENST00000517164 SMG6Q86US8 1419 aaKnown RBP-1.07□□□□□ -2.58
RNU6-1028P-201ENST00000517164 TRBV7-4A0A0J9YYF1 115 aa-1.08□□□□□ -2.58
RNU6-1028P-201ENST00000517164 SPINK4O60575 86 aa-1.08□□□□□ -2.58
RNU6-1028P-201ENST00000517164 HMGN1P05114 100 aa-1.08□□□□□ -2.58
RNU6-1028P-201ENST00000517164 UBA52P62987 128 aaKnown RBP-1.08□□□□□ -2.58
RNU6-1028P-201ENST00000517164 FAM223AQ8IWN6 122 aa-1.08□□□□□ -2.58
RNU6-1028P-201ENST00000517164 C1orf54Q8WWF1 131 aa-1.08□□□□□ -2.58
RNU6-1028P-201ENST00000517164 UQCR10Q9UDW1 63 aa-1.08□□□□□ -2.58
RNU6-1028P-201ENST00000517164 ARL2-SNX15V9GYD0 113 aa-1.08□□□□□ -2.58
RNU6-1028P-201ENST00000517164 KTN1Q86UP2 1357 aaKnown RBP-1.08□□□□□ -2.58
RNU6-1028P-201ENST00000517164 A2ML1A8K2U0 1454 aa-1.09□□□□□ -2.58
RNU6-1028P-201ENST00000517164 CNOT1A5YKK6 2376 aaKnown RBP-1.09□□□□□ -2.58
RNU6-1028P-201ENST00000517164 LINC00959A0A1B0GUT2 108 aa-1.09□□□□□ -2.58
RNU6-1028P-201ENST00000517164 C9orf153Q5TBE3 101 aa-1.09□□□□□ -2.58
RNU6-1028P-201ENST00000517164 UBE2L5PA0A1B0GUS4 154 aa-1.1□□□□□ -2.59
RNU6-1028P-201ENST00000517164 UBE2L3P68036 154 aaKnown RBP-1.1□□□□□ -2.59
RNU6-1028P-201ENST00000517164 WHAMMP3Q1A5X7 153 aa-1.1□□□□□ -2.59
RNU6-1028P-201ENST00000517164 KLK9Q2XQG4 91 aa-1.1□□□□□ -2.59
RNU6-1028P-201ENST00000517164 HMGXB3Q12766 1538 aa-1.1□□□□□ -2.59
RNU6-1028P-201ENST00000517164 MAGI1Q96QZ7 1491 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-1028P-201ENST00000517164 DEFB105AQ8NG35 78 aa-1.11□□□□□ -2.59
RNU6-1028P-201ENST00000517164 TET3O43151 1660 aa-1.11□□□□□ -2.59
RNU6-1028P-201ENST00000517164 FDCSPQ8NFU4 85 aa-1.12□□□□□ -2.59
RNU6-1028P-201ENST00000517164 DPH3P1Q9H4G8 78 aa-1.12□□□□□ -2.59
RNU6-1028P-201ENST00000517164 ROCK2O75116 1388 aaKnown RBP-1.12□□□□□ -2.59
RNU6-1028P-201ENST00000517164 MAP1AP78559 2803 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-1028P-201ENST00000517164 GNG11P61952 73 aa-1.13□□□□□ -2.59
RNU6-1028P-201ENST00000517164 LINC01600Q96MT4 127 aa-1.13□□□□□ -2.59
RNU6-1028P-201ENST00000517164 CUL7Q14999 1698 aa-1.13□□□□□ -2.59
RNU6-1028P-201ENST00000517164 FAM167A-AS1Q96KT0 104 aa-1.14□□□□□ -2.59
RNU6-1028P-201ENST00000517164 PDZD2O15018 2839 aa-1.15□□□□□ -2.59
RNU6-1028P-201ENST00000517164 M0R2T5 61 aa-1.15□□□□□ -2.59
RNU6-1028P-201ENST00000517164 HERC1Q15751 4861 aa-1.16□□□□□ -2.59
RNU6-1028P-201ENST00000517164 SNAPC5O75971 98 aa-1.16□□□□□ -2.6
RNU6-1028P-201ENST00000517164 MANBALQ9NQG1 85 aa-1.16□□□□□ -2.6
RNU6-1028P-201ENST00000517164 KIAA0556O60303 1618 aa-1.16□□□□□ -2.6
RNU6-1028P-201ENST00000517164 EHBP1L1Q8N3D4 1523 aa-1.16□□□□□ -2.6
RNU6-1028P-201ENST00000517164 STAB2Q8WWQ8 2551 aa-1.16□□□□□ -2.6
RNU6-1028P-201ENST00000517164 DOPEY1Q5JWR5 2465 aa-1.16□□□□□ -2.6
RNU6-1028P-201ENST00000517164 FAM24AA6NFZ4 105 aa-1.17□□□□□ -2.6
RNU6-1028P-201ENST00000517164 Q0VG73 95 aa-1.17□□□□□ -2.6
RNU6-1028P-201ENST00000517164 SFTA2Q6UW10 78 aa-1.17□□□□□ -2.6
RNU6-1028P-201ENST00000517164 LCN9Q8WX39 176 aa-1.17□□□□□ -2.6
RNU6-1028P-201ENST00000517164 SCN7AQ01118 1682 aa-1.17□□□□□ -2.6
RNU6-1028P-201ENST00000517164 NBEAL1Q6ZS30 2694 aa-1.17□□□□□ -2.6
RNU6-1028P-201ENST00000517164 SYS1-DBNDD2H3BUS1 97 aa-1.18□□□□□ -2.6
RNU6-1028P-201ENST00000517164 ATP5EP56381 51 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-1028P-201ENST00000517164 LRP1BQ9NZR2 4599 aa-1.18□□□□□ -2.6
RNU6-1028P-201ENST00000517164 IQSEC2Q5JU85 1478 aa-1.18□□□□□ -2.6
RNU6-1028P-201ENST00000517164 NALCNQ8IZF0 1738 aa-1.19□□□□□ -2.6
RNU6-1028P-201ENST00000517164 SCAPERQ9BY12 1400 aa-1.19□□□□□ -2.6
RNU6-1028P-201ENST00000517164 PRO1933Q9H354 126 aa-1.19□□□□□ -2.6
RNU6-1028P-201ENST00000517164 SETBP1Q9Y6X0 1596 aa-1.19□□□□□ -2.6
RNU6-1028P-201ENST00000517164 C1orf167Q5SNV9 1468 aa-1.19□□□□□ -2.6
RNU6-1028P-201ENST00000517164 F6UZH7 168 aa-1.2□□□□□ -2.6
RNU6-1028P-201ENST00000517164 RPL13AP3Q6NVV1 102 aa-1.2□□□□□ -2.6
RNU6-1028P-201ENST00000517164 MYOM2P54296 1465 aa-1.2□□□□□ -2.6
RNU6-1028P-201ENST00000517164 CREBBPQ92793 2442 aa-1.2□□□□□ -2.6
RNU6-1028P-201ENST00000517164 A0A1B0GWA3 101 aa-1.21□□□□□ -2.6
RNU6-1028P-201ENST00000517164 FAM223BA6NKX1 122 aa-1.21□□□□□ -2.6
RNU6-1028P-201ENST00000517164 COX8AP10176 69 aa-1.21□□□□□ -2.6
RNU6-1028P-201ENST00000517164 UBE2D3P61077 147 aa-1.21□□□□□ -2.6
RNU6-1028P-201ENST00000517164 UBE2D2P62837 147 aa-1.21□□□□□ -2.6
RNU6-1028P-201ENST00000517164 ADGRL2O95490 1459 aa-1.21□□□□□ -2.6
RNU6-1028P-201ENST00000517164 FMN2Q9NZ56 1722 aa-1.21□□□□□ -2.6
RNU6-1028P-201ENST00000517164 TRAPPC2P0DI81 140 aa-1.22□□□□□ -2.6
RNU6-1028P-201ENST00000517164 TRAPPC2BP0DI82 140 aa-1.22□□□□□ -2.6
RNU6-1028P-201ENST00000517164 USMG5Q96IX5 58 aa-1.22□□□□□ -2.6
RNU6-1028P-201ENST00000517164 COX6CP09669 75 aa-1.23□□□□□ -2.61
RNU6-1028P-201ENST00000517164 PRO1854Q9UHT4 67 aa-1.24□□□□□ -2.61
RNU6-1028P-201ENST00000517164 APLNQ9ULZ1 77 aa-1.24□□□□□ -2.61
RNU6-1028P-201ENST00000517164 IER3IP1Q9Y5U9 82 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms