RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 B2MP61769 119 aa-2.28□□□□□ -2.77
RNU6-1088P-201ENST00000516850 TMEM263Q8WUH6 116 aaKnown RBP-2.28□□□□□ -2.77
RNU6-1088P-201ENST00000516850 MGST2Q99735 147 aa-2.28□□□□□ -2.77
RNU6-1088P-201ENST00000516850 SMIM3Q9BZL3 60 aa-2.28□□□□□ -2.77
RNU6-1088P-201ENST00000516850 TEP1Q99973 2627 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1088P-201ENST00000516850 MGPP08493 103 aa-2.29□□□□□ -2.78
RNU6-1088P-201ENST00000516850 AIF1LQ9BQI0 150 aa-2.29□□□□□ -2.78
RNU6-1088P-201ENST00000516850 GSKIPQ9P0R6 139 aa-2.29□□□□□ -2.78
RNU6-1088P-201ENST00000516850 ANKRD30AQ9BXX3 1397 aa-2.29□□□□□ -2.78
RNU6-1088P-201ENST00000516850 PRG4Q92954 1404 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-1088P-201ENST00000516850 LAMA2P24043 3122 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1088P-201ENST00000516850 TRBV7-3A0A075B6L6 115 aa-2.3□□□□□ -2.78
RNU6-1088P-201ENST00000516850 K7ERU9 68 aa-2.3□□□□□ -2.78
RNU6-1088P-201ENST00000516850 SFT2D2O95562 160 aa-2.3□□□□□ -2.78
RNU6-1088P-201ENST00000516850 S100A5P33763 92 aa-2.3□□□□□ -2.78
RNU6-1088P-201ENST00000516850 DNAH9Q9NYC9 4486 aa-2.3□□□□□ -2.78
RNU6-1088P-201ENST00000516850 LAMA1P25391 3075 aa-2.31□□□□□ -2.78
RNU6-1088P-201ENST00000516850 ZFHX3Q15911 3703 aa-2.31□□□□□ -2.78
RNU6-1088P-201ENST00000516850 MAGI1Q96QZ7 1491 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-1088P-201ENST00000516850 M0R2Z0 102 aa-2.31□□□□□ -2.78
RNU6-1088P-201ENST00000516850 SSSCA1O60232 199 aa-2.31□□□□□ -2.78
RNU6-1088P-201ENST00000516850 C10orf113Q5VZT2 155 aa-2.31□□□□□ -2.78
RNU6-1088P-201ENST00000516850 Q8N8P6 123 aa-2.31□□□□□ -2.78
RNU6-1088P-201ENST00000516850 LOC285095A0A1B0GVY8 99 aa-2.32□□□□□ -2.78
RNU6-1088P-201ENST00000516850 H0YGG7 62 aa-2.32□□□□□ -2.78
RNU6-1088P-201ENST00000516850 NBEAP1P0C6P0 100 aa-2.32□□□□□ -2.78
RNU6-1088P-201ENST00000516850 FDCSPQ8NFU4 85 aa-2.32□□□□□ -2.78
RNU6-1088P-201ENST00000516850 CUBNO60494 3623 aa-2.32□□□□□ -2.78
RNU6-1088P-201ENST00000516850 COL4A6Q14031 1691 aa-2.32□□□□□ -2.78
RNU6-1088P-201ENST00000516850 HMGN4O00479 90 aa-2.33□□□□□ -2.78
RNU6-1088P-201ENST00000516850 FAIMQ9NVQ4 179 aa-2.33□□□□□ -2.78
RNU6-1088P-201ENST00000516850 A0A0G2JMZ2 1700 aa-2.34□□□□□ -2.78
RNU6-1088P-201ENST00000516850 LYSTQ99698 3801 aa-2.34□□□□□ -2.78
RNU6-1088P-201ENST00000516850 MT1AP04731 61 aa-2.34□□□□□ -2.78
RNU6-1088P-201ENST00000516850 UBA52P62987 128 aaKnown RBP-2.34□□□□□ -2.78
RNU6-1088P-201ENST00000516850 H1FX-AS1Q4G0G2 97 aa-2.34□□□□□ -2.78
RNU6-1088P-201ENST00000516850 C12orf73Q69YU5 71 aa-2.34□□□□□ -2.78
RNU6-1088P-201ENST00000516850 KNL1Q8NG31 2342 aa-2.35□□□□□ -2.79
RNU6-1088P-201ENST00000516850 VPS13BQ7Z7G8 4022 aa-2.35□□□□□ -2.79
RNU6-1088P-201ENST00000516850 GNG14A0A1W2PPG7 69 aa-2.35□□□□□ -2.79
RNU6-1088P-201ENST00000516850 MYOM1P52179 1685 aa-2.35□□□□□ -2.79
RNU6-1088P-201ENST00000516850 CCDC141Q6ZP82 1450 aa-2.36□□□□□ -2.79
RNU6-1088P-201ENST00000516850 FHAD1B1AJZ9 1412 aa-2.36□□□□□ -2.79
RNU6-1088P-201ENST00000516850 ADAMTS12P58397 1594 aa-2.36□□□□□ -2.79
RNU6-1088P-201ENST00000516850 MYH7P12883 1935 aa-2.36□□□□□ -2.79
RNU6-1088P-201ENST00000516850 SLIT1O75093 1534 aa-2.37□□□□□ -2.79
RNU6-1088P-201ENST00000516850 PTPN23Q9H3S7 1636 aa-2.37□□□□□ -2.79
RNU6-1088P-201ENST00000516850 TCEAL4Q96EI5 215 aa-2.37□□□□□ -2.79
RNU6-1088P-201ENST00000516850 TNRC18O15417 2968 aaPredicted RBP-2.38□□□□□ -2.79
RNU6-1088P-201ENST00000516850 MRPL54Q6P161 138 aaKnown RBP-2.38□□□□□ -2.79
RNU6-1088P-201ENST00000516850 LINC01600Q96MT4 127 aa-2.38□□□□□ -2.79
RNU6-1088P-201ENST00000516850 SMCO1Q147U7 214 aa-2.39□□□□□ -2.79
RNU6-1088P-201ENST00000516850 WHAMMP3Q1A5X7 153 aa-2.39□□□□□ -2.79
RNU6-1088P-201ENST00000516850 SPRR4Q96PI1 79 aa-2.39□□□□□ -2.79
RNU6-1088P-201ENST00000516850 SELENOSQ9BQE4 189 aa-2.39□□□□□ -2.79
RNU6-1088P-201ENST00000516850 QRICH2Q9H0J4 1663 aa-2.4□□□□□ -2.79
RNU6-1088P-201ENST00000516850 CKS1BP61024 79 aa-2.4□□□□□ -2.79
RNU6-1088P-201ENST00000516850 COPZ1P61923 177 aa-2.4□□□□□ -2.79
RNU6-1088P-201ENST00000516850 COPS9Q8WXC6 57 aa-2.4□□□□□ -2.79
RNU6-1088P-201ENST00000516850 TSLPQ969D9 159 aa-2.4□□□□□ -2.79
RNU6-1088P-201ENST00000516850 FAM167A-AS1Q96KT0 104 aa-2.4□□□□□ -2.79
RNU6-1088P-201ENST00000516850 TMEM191AQ9H0A3 160 aa-2.4□□□□□ -2.79
RNU6-1088P-201ENST00000516850 PRO1933Q9H354 126 aa-2.4□□□□□ -2.79
RNU6-1088P-201ENST00000516850 TPT1P8Q9HAU6 139 aa-2.4□□□□□ -2.79
RNU6-1088P-201ENST00000516850 XRN1Q8IZH2 1706 aaKnown RBP-2.4□□□□□ -2.79
RNU6-1088P-201ENST00000516850 IGLC1P0CG04 106 aa-2.41□□□□□ -2.8
RNU6-1088P-201ENST00000516850 NXT2Q9NPJ8 142 aaKnown RBP-2.41□□□□□ -2.8
RNU6-1088P-201ENST00000516850 CCDC167Q9P0B6 97 aa-2.41□□□□□ -2.8
RNU6-1088P-201ENST00000516850 DNAH2Q9P225 4427 aa-2.41□□□□□ -2.8
RNU6-1088P-201ENST00000516850 PRRC2CQ9Y520 2896 aaKnown RBP-2.42□□□□□ -2.8
RNU6-1088P-201ENST00000516850 SCGB1A1P11684 91 aa-2.42□□□□□ -2.8
RNU6-1088P-201ENST00000516850 HIST1H1DP16402 221 aaKnown RBP-2.42□□□□□ -2.8
RNU6-1088P-201ENST00000516850 TSTD1Q8NFU3 115 aa-2.42□□□□□ -2.8
RNU6-1088P-201ENST00000516850 ARHGEF5Q12774 1597 aa-2.43□□□□□ -2.8
RNU6-1088P-201ENST00000516850 UBE2D3P61077 147 aa-2.43□□□□□ -2.8
RNU6-1088P-201ENST00000516850 UBE2D2P62837 147 aa-2.43□□□□□ -2.8
RNU6-1088P-201ENST00000516850 PDCD10Q9BUL8 212 aa-2.43□□□□□ -2.8
RNU6-1088P-201ENST00000516850 CRIPTQ9P021 101 aa-2.43□□□□□ -2.8
RNU6-1088P-201ENST00000516850 COL14A1Q05707 1796 aaKnown RBP-2.44□□□□□ -2.8
RNU6-1088P-201ENST00000516850 NKTRP30414 1462 aaKnown RBP-2.44□□□□□ -2.8
RNU6-1088P-201ENST00000516850 MARF1Q9Y4F3 1742 aaKnown RBP-2.44□□□□□ -2.8
RNU6-1088P-201ENST00000516850 I3L3M4 83 aa-2.44□□□□□ -2.8
RNU6-1088P-201ENST00000516850 AKAP14Q86UN6 197 aa-2.44□□□□□ -2.8
RNU6-1088P-201ENST00000516850 DPH3Q96FX2 82 aa-2.44□□□□□ -2.8
RNU6-1088P-201ENST00000516850 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.45□□□□□ -2.8
RNU6-1088P-201ENST00000516850 CFTRP13569 1480 aa-2.45□□□□□ -2.8
RNU6-1088P-201ENST00000516850 C1orf167Q5SNV9 1468 aa-2.45□□□□□ -2.8
RNU6-1088P-201ENST00000516850 TET3O43151 1660 aa-2.45□□□□□ -2.8
RNU6-1088P-201ENST00000516850 TROQ12816 1431 aaPredicted RBP-2.45□□□□□ -2.8
RNU6-1088P-201ENST00000516850 ZZEF1O43149 2961 aa-2.46□□□□□ -2.8
RNU6-1088P-201ENST00000516850 RPS25P62851 125 aaKnown RBP-2.46□□□□□ -2.8
RNU6-1088P-201ENST00000516850 NUP188Q5SRE5 1749 aa-2.46□□□□□ -2.8
RNU6-1088P-201ENST00000516850 AKAP13Q12802 2813 aa-2.46□□□□□ -2.8
RNU6-1088P-201ENST00000516850 SEC11AP67812 179 aa-2.47□□□□□ -2.8
RNU6-1088P-201ENST00000516850 BTG2P78543 158 aa-2.47□□□□□ -2.8
RNU6-1088P-201ENST00000516850 FAM223AQ8IWN6 122 aa-2.47□□□□□ -2.8
RNU6-1088P-201ENST00000516850 UQCR10Q9UDW1 63 aa-2.47□□□□□ -2.8
RNU6-1088P-201ENST00000516850 H3BNG1 76 aa-2.48□□□□□ -2.81
RNU6-1088P-201ENST00000516850 CHKB-CPT1BH3BT56 60 aa-2.48□□□□□ -2.81
RNU6-1088P-201ENST00000516850 LZICQ8WZA0 190 aa-2.48□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms