RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NDUFS5O43920 106 aa5.42□□□□□ -1.54
PDLIM5-219ENST00000514743 IGHV3-11P01762 117 aa5.42□□□□□ -1.54
PDLIM5-219ENST00000514743 LAGE3Q14657 143 aa5.42□□□□□ -1.54
PDLIM5-219ENST00000514743 ESRGQ1W209 222 aa5.42□□□□□ -1.54
PDLIM5-219ENST00000514743 IGLV2-18A0A075B6J9 118 aa5.42□□□□□ -1.54
PDLIM5-219ENST00000514743 IGHV4-4A0A075B6R2 117 aa5.42□□□□□ -1.54
PDLIM5-219ENST00000514743 KLKP1Q107X0 134 aa5.42□□□□□ -1.54
PDLIM5-219ENST00000514743 ZFAND2AQ8N6M9 145 aa5.42□□□□□ -1.54
PDLIM5-219ENST00000514743 USMG5Q96IX5 58 aa5.42□□□□□ -1.54
PDLIM5-219ENST00000514743 SCGB3A1Q96QR1 104 aa5.42□□□□□ -1.54
PDLIM5-219ENST00000514743 LINC00588Q9Y4M8 146 aa5.42□□□□□ -1.54
PDLIM5-219ENST00000514743 ANKRD17O75179 2603 aaKnown RBP5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 ADAMTSL4-AS1Q5T5F5 129 aa5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 Q6ZVQ6 151 aa5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 CSPG4Q6UVK1 2322 aa5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 B4DSR2 109 aa5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 SPANXN1Q5VSR9 72 aa5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 FAM19A3Q7Z5A8 133 aa5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 LENEPQ9Y5L5 61 aa5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 NACAE9PAV3 2078 aa5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 IBA57-AS1B1ANH7 110 aa5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 M0R381 172 aa5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 FUSP35637 526 aaKnown RBP eCLIP5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 RPL28P46779 137 aaKnown RBP5.41□□□□□ -1.54
PDLIM5-219ENST00000514743 MUC4Q99102 2169 aa5.4□□□□□ -1.54
PDLIM5-219ENST00000514743 CENPEQ02224 2701 aa5.4□□□□□ -1.54
PDLIM5-219ENST00000514743 I3L3M4 83 aa5.4□□□□□ -1.54
PDLIM5-219ENST00000514743 NDUFC1O43677 76 aa5.4□□□□□ -1.54
PDLIM5-219ENST00000514743 ZNF580Q9UK33 172 aa5.4□□□□□ -1.54
PDLIM5-219ENST00000514743 TRAV7A0A075B6U4 112 aa5.4□□□□□ -1.55
PDLIM5-219ENST00000514743 UBE2BP63146 152 aa5.4□□□□□ -1.55
PDLIM5-219ENST00000514743 C10orf99Q6UWK7 81 aa5.4□□□□□ -1.55
PDLIM5-219ENST00000514743 IGHV4-59P01825 116 aa5.39□□□□□ -1.55
PDLIM5-219ENST00000514743 TSPEAR-AS2P59090 65 aa5.39□□□□□ -1.55
PDLIM5-219ENST00000514743 DOPEY2Q9Y3R5 2298 aa5.39□□□□□ -1.55
PDLIM5-219ENST00000514743 A8MUN3 132 aa5.39□□□□□ -1.55
PDLIM5-219ENST00000514743 PRB1P04280 392 aa5.39□□□□□ -1.55
PDLIM5-219ENST00000514743 DEFB112Q30KQ8 113 aa5.39□□□□□ -1.55
PDLIM5-219ENST00000514743 BBC3Q96PG8 261 aaPredicted RBP5.39□□□□□ -1.55
PDLIM5-219ENST00000514743 RHPN1-AS1Q9BWJ2 59 aa5.39□□□□□ -1.55
PDLIM5-219ENST00000514743 MYO18BQ8IUG5 2567 aa5.39□□□□□ -1.55
PDLIM5-219ENST00000514743 LYRM9A8MSI8 78 aa5.39□□□□□ -1.55
PDLIM5-219ENST00000514743 BAALC-AS2P0C853 105 aa5.39□□□□□ -1.55
PDLIM5-219ENST00000514743 DSCR9P59020 149 aa5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 ZNF876PQ49A33 203 aa5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 SORL1Q92673 2214 aa5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 CREBBPQ92793 2442 aa5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 MGPP08493 103 aa5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 S100A4P26447 101 aaKnown RBP5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 WFDC9Q8NEX5 89 aa5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 RPL39LQ96EH5 51 aaKnown RBP5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 LINC00846Q9NV44 126 aa5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 PSPHP1O15172 72 aa5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 LINC01356Q8N9X3 169 aa5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 MAPK1IP1LQ8NDC0 245 aa5.38□□□□□ -1.55
PDLIM5-219ENST00000514743 C11orf86A6NJI1 115 aa5.37□□□□□ -1.55
PDLIM5-219ENST00000514743 GNRH2O43555 120 aa5.37□□□□□ -1.55
PDLIM5-219ENST00000514743 FSHBP01225 129 aa5.37□□□□□ -1.55
PDLIM5-219ENST00000514743 RNASE3P12724 160 aaKnown RBP5.37□□□□□ -1.55
PDLIM5-219ENST00000514743 RNASE4P34096 147 aaKnown RBP5.37□□□□□ -1.55
PDLIM5-219ENST00000514743 SPTSSBQ8NFR3 76 aa5.37□□□□□ -1.55
PDLIM5-219ENST00000514743 POLQO75417 2590 aa5.37□□□□□ -1.55
PDLIM5-219ENST00000514743 TRAV21A0A0B4J279 112 aa5.37□□□□□ -1.55
PDLIM5-219ENST00000514743 KLLNB2CW77 178 aa5.37□□□□□ -1.55
PDLIM5-219ENST00000514743 ACACBO00763 2458 aa5.37□□□□□ -1.55
PDLIM5-219ENST00000514743 TEX15Q9BXT5 2789 aa5.37□□□□□ -1.55
PDLIM5-219ENST00000514743 OVOL2Q9BRP0 275 aa5.36□□□□□ -1.55
PDLIM5-219ENST00000514743 Q6ZSV7 163 aa5.36□□□□□ -1.55
PDLIM5-219ENST00000514743 LCA10Q71F78 164 aa5.36□□□□□ -1.55
PDLIM5-219ENST00000514743 USP9YO00507 2555 aaPredicted RBP5.36□□□□□ -1.55
PDLIM5-219ENST00000514743 MED14OSP0DP75 135 aa5.36□□□□□ -1.55
PDLIM5-219ENST00000514743 KRTAP10-9P60411 292 aa5.36□□□□□ -1.55
PDLIM5-219ENST00000514743 PRRC2AP48634 2157 aaKnown RBP5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 ZNF462Q96JM2 2506 aa5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 IGKV3-20P01619 116 aa5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 PHLDA3Q9Y5J5 127 aa5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 APCP25054 2843 aa5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 KIF25-AS1Q9Y6Z4 181 aa5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 ZFYVE26Q68DK2 2539 aa5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 MIFP14174 115 aa5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 LINC00315P59091 139 aa5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 SMIM2Q9BVW6 85 aa5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 ZNF702PQ9H963 129 aa5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 C14orf132Q9NPU4 83 aa5.35□□□□□ -1.55
PDLIM5-219ENST00000514743 IGHV4-31P0DP07 118 aa5.34□□□□□ -1.55
PDLIM5-219ENST00000514743 ENHOQ6UWT2 76 aa5.34□□□□□ -1.55
PDLIM5-219ENST00000514743 Q6YL49 198 aa5.34□□□□□ -1.55
PDLIM5-219ENST00000514743 ANK3Q12955 4377 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-219ENST00000514743 AMELXQ99217 191 aa5.34□□□□□ -1.55
PDLIM5-219ENST00000514743 Q9H8V8 135 aa5.34□□□□□ -1.55
PDLIM5-219ENST00000514743 TENM4Q6N022 2769 aa5.34□□□□□ -1.56
PDLIM5-219ENST00000514743 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
PDLIM5-219ENST00000514743 ATP5EP2Q5VTU8 51 aa5.33□□□□□ -1.56
PDLIM5-219ENST00000514743 ZNF843Q8N446 348 aa5.33□□□□□ -1.56
PDLIM5-219ENST00000514743 DYNLRB2Q8TF09 96 aa5.33□□□□□ -1.56
PDLIM5-219ENST00000514743 A8MU10 97 aa5.33□□□□□ -1.56
PDLIM5-219ENST00000514743 TOMM6Q96B49 74 aa5.33□□□□□ -1.56
PDLIM5-219ENST00000514743 UNC79Q9P2D8 2635 aa5.33□□□□□ -1.56
PDLIM5-219ENST00000514743 IGHV4OR15-8A0A075B7B6 117 aa5.33□□□□□ -1.56
PDLIM5-219ENST00000514743 A0A087WW49 117 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms