RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 Q8N8P6 123 aa11.96□□□□□ -0.49
LPCAT1-206ENST00000514484 PLAC8Q9NZF1 115 aa11.96□□□□□ -0.49
LPCAT1-206ENST00000514484 FAT3Q8TDW7 4589 aa11.96□□□□□ -0.5
LPCAT1-206ENST00000514484 IGLV4-3A0A075B6K6 122 aa11.95□□□□□ -0.5
LPCAT1-206ENST00000514484 J3QL48 77 aa11.95□□□□□ -0.5
LPCAT1-206ENST00000514484 KIAA1644Q3SXP7 199 aa11.95□□□□□ -0.5
LPCAT1-206ENST00000514484 SPAG11BQ08648 103 aa11.94□□□□□ -0.5
LPCAT1-206ENST00000514484 STPG4Q8N801 248 aa11.94□□□□□ -0.5
LPCAT1-206ENST00000514484 ZC2HC1BQ5TFG8 222 aa11.93□□□□□ -0.5
LPCAT1-206ENST00000514484 CAMK2N2Q96S95 79 aa11.93□□□□□ -0.5
LPCAT1-206ENST00000514484 IGHV3OR16-9A0A0B4J2B5 98 aa11.92□□□□□ -0.5
LPCAT1-206ENST00000514484 APOMO95445 188 aa11.92□□□□□ -0.5
LPCAT1-206ENST00000514484 C2orf66Q6UXQ4 117 aa11.92□□□□□ -0.5
LPCAT1-206ENST00000514484 ORAOV1Q8WV07 137 aa11.92□□□□□ -0.5
LPCAT1-206ENST00000514484 TMEM141Q96I45 108 aa11.92□□□□□ -0.5
LPCAT1-206ENST00000514484 CYSLTR1Q9Y271 337 aa11.92□□□□□ -0.5
LPCAT1-206ENST00000514484 PYGO1Q9Y3Y4 419 aa11.92□□□□□ -0.5
LPCAT1-206ENST00000514484 TRAV9-1A0A075B6T8 112 aa11.91□□□□□ -0.5
LPCAT1-206ENST00000514484 KRTAP29-1A8MX34 341 aaPredicted RBP11.91□□□□□ -0.5
LPCAT1-206ENST00000514484 S100PP25815 95 aa11.9□□□□□ -0.5
LPCAT1-206ENST00000514484 NXT2Q9NPJ8 142 aaKnown RBP11.9□□□□□ -0.5
LPCAT1-206ENST00000514484 TGIF2-C20orf24A0A0A6YYL0 155 aa11.89□□□□□ -0.51
LPCAT1-206ENST00000514484 A0A0J9YXV3 536 aa11.89□□□□□ -0.51
LPCAT1-206ENST00000514484 GAGE2BQ13066 116 aa11.89□□□□□ -0.51
LPCAT1-206ENST00000514484 ORMDL2Q53FV1 153 aa11.89□□□□□ -0.51
LPCAT1-206ENST00000514484 OR10D4PQ8NGN7 298 aa11.89□□□□□ -0.51
LPCAT1-206ENST00000514484 C2orf48Q96LS8 159 aa11.89□□□□□ -0.51
LPCAT1-206ENST00000514484 PKIGQ9Y2B9 76 aa11.89□□□□□ -0.51
LPCAT1-206ENST00000514484 LOC107984640A0A0U1RRK4 108 aa11.88□□□□□ -0.51
LPCAT1-206ENST00000514484 PTTG1IPP53801 180 aa11.88□□□□□ -0.51
LPCAT1-206ENST00000514484 C10orf91Q5T1B1 145 aa11.88□□□□□ -0.51
LPCAT1-206ENST00000514484 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
LPCAT1-206ENST00000514484 TEX43Q6ZNM6 134 aa11.88□□□□□ -0.51
LPCAT1-206ENST00000514484 LINC00173Q6ZV60 143 aa11.88□□□□□ -0.51
LPCAT1-206ENST00000514484 C7orf33Q8WU49 177 aa11.88□□□□□ -0.51
LPCAT1-206ENST00000514484 RPL18AQ02543 176 aaKnown RBP11.87□□□□□ -0.51
LPCAT1-206ENST00000514484 RPS10P5Q9NQ39 176 aa11.87□□□□□ -0.51
LPCAT1-206ENST00000514484 LINC00474Q9P2X8 69 aa11.87□□□□□ -0.51
LPCAT1-206ENST00000514484 CARHSP1Q9Y2V2 147 aaKnown RBP11.87□□□□□ -0.51
LPCAT1-206ENST00000514484 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.86□□□□□ -0.51
LPCAT1-206ENST00000514484 UBE2D1P51668 147 aa11.86□□□□□ -0.51
LPCAT1-206ENST00000514484 Q6ZN92 141 aa11.86□□□□□ -0.51
LPCAT1-206ENST00000514484 C2orf88Q9BSF0 95 aa11.86□□□□□ -0.51
LPCAT1-206ENST00000514484 GNB1LQ9BYB4 327 aa11.86□□□□□ -0.51
LPCAT1-206ENST00000514484 K7EMI3 77 aa11.85□□□□□ -0.51
LPCAT1-206ENST00000514484 RHEBQ15382 184 aa11.85□□□□□ -0.51
LPCAT1-206ENST00000514484 A0A087WZ39 114 aa11.84□□□□□ -0.51
LPCAT1-206ENST00000514484 IGIPA6NJ69 53 aa11.84□□□□□ -0.51
LPCAT1-206ENST00000514484 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
LPCAT1-206ENST00000514484 AMELXQ99217 191 aa11.84□□□□□ -0.51
LPCAT1-206ENST00000514484 VCX2Q9H322 139 aa11.83□□□□□ -0.52
LPCAT1-206ENST00000514484 NDUFA1O15239 70 aa11.82□□□□□ -0.52
LPCAT1-206ENST00000514484 OXTP01178 125 aa11.82□□□□□ -0.52
LPCAT1-206ENST00000514484 PRR3P79522 188 aaKnown RBP11.82□□□□□ -0.52
LPCAT1-206ENST00000514484 UNQ6190/PRO20217Q6UXQ8 127 aa11.82□□□□□ -0.52
LPCAT1-206ENST00000514484 TOMM6Q96B49 74 aa11.82□□□□□ -0.52
LPCAT1-206ENST00000514484 ALKBH7Q9BT30 221 aaPredicted RBP11.82□□□□□ -0.52
LPCAT1-206ENST00000514484 MRPL18Q9H0U6 180 aaKnown RBP11.82□□□□□ -0.52
LPCAT1-206ENST00000514484 A0A1W2PNN7 141 aa11.81□□□□□ -0.52
LPCAT1-206ENST00000514484 MRPL35Q9NZE8 188 aaKnown RBP11.81□□□□□ -0.52
LPCAT1-206ENST00000514484 FABP9Q0Z7S8 132 aa11.8□□□□□ -0.52
LPCAT1-206ENST00000514484 KIAA0087Q14695 138 aa11.8□□□□□ -0.52
LPCAT1-206ENST00000514484 C6orf48Q9UBA6 75 aa11.8□□□□□ -0.52
LPCAT1-206ENST00000514484 APOC3P02656 99 aa11.79□□□□□ -0.52
LPCAT1-206ENST00000514484 MT-ND6P03923 174 aa11.79□□□□□ -0.52
LPCAT1-206ENST00000514484 NPSP0C0P6 89 aa11.79□□□□□ -0.52
LPCAT1-206ENST00000514484 RNF151Q2KHN1 245 aa11.79□□□□□ -0.52
LPCAT1-206ENST00000514484 C2orf82Q6UX34 121 aa11.79□□□□□ -0.52
LPCAT1-206ENST00000514484 TIMM17AQ99595 171 aa11.79□□□□□ -0.52
LPCAT1-206ENST00000514484 F8WDY8 70 aa11.78□□□□□ -0.52
LPCAT1-206ENST00000514484 COX19Q49B96 90 aa11.78□□□□□ -0.52
LPCAT1-206ENST00000514484 C9orf116Q5BN46 136 aaPredicted RBP11.78□□□□□ -0.52
LPCAT1-206ENST00000514484 G0S2P27469 103 aa11.77□□□□□ -0.53
LPCAT1-206ENST00000514484 SCGB3A1Q96QR1 104 aa11.77□□□□□ -0.53
LPCAT1-206ENST00000514484 LINC01546A6NGU7 62 aa11.76□□□□□ -0.53
LPCAT1-206ENST00000514484 PAPPA-AS1Q5QFB9 102 aa11.76□□□□□ -0.53
LPCAT1-206ENST00000514484 Q6ZRP5 223 aa11.76□□□□□ -0.53
LPCAT1-206ENST00000514484 ERASQ7Z444 233 aa11.76□□□□□ -0.53
LPCAT1-206ENST00000514484 TOMM7Q9P0U1 55 aa11.76□□□□□ -0.53
LPCAT1-206ENST00000514484 FA2HQ7L5A8 372 aa11.75□□□□□ -0.53
LPCAT1-206ENST00000514484 FAM19A3Q7Z5A8 133 aa11.75□□□□□ -0.53
LPCAT1-206ENST00000514484 SMCO4Q9NRQ5 59 aa11.75□□□□□ -0.53
LPCAT1-206ENST00000514484 CDKN2A-AS1Q9UH64 79 aa11.75□□□□□ -0.53
LPCAT1-206ENST00000514484 FAM168BA1KXE4 195 aa11.74□□□□□ -0.53
LPCAT1-206ENST00000514484 GAGE2EQ4V326 116 aa11.74□□□□□ -0.53
LPCAT1-206ENST00000514484 PHF5AQ7RTV0 110 aaKnown RBP11.74□□□□□ -0.53
LPCAT1-206ENST00000514484 LINC01561Q8N1V8 128 aa11.74□□□□□ -0.53
LPCAT1-206ENST00000514484 GEMIN7Q9H840 131 aaKnown RBP11.74□□□□□ -0.53
LPCAT1-206ENST00000514484 GAGE2DQ9UEU5 116 aa11.74□□□□□ -0.53
LPCAT1-206ENST00000514484 HERVK_113P63121 156 aa11.73□□□□□ -0.53
LPCAT1-206ENST00000514484 NDUFA5Q16718 116 aa11.73□□□□□ -0.53
LPCAT1-206ENST00000514484 SNAPINO95295 136 aa11.72□□□□□ -0.53
LPCAT1-206ENST00000514484 PRSS2P07478 247 aa11.72□□□□□ -0.53
LPCAT1-206ENST00000514484 TLX1NBP0CAT3 122 aa11.72□□□□□ -0.53
LPCAT1-206ENST00000514484 SVBPQ8N300 66 aa11.72□□□□□ -0.53
LPCAT1-206ENST00000514484 TRAPPC1Q9Y5R8 145 aa11.72□□□□□ -0.53
LPCAT1-206ENST00000514484 TNXBP22105 4242 aa11.71□□□□□ -0.53
LPCAT1-206ENST00000514484 TRBV30A0A0K0K1B3 111 aa11.71□□□□□ -0.53
LPCAT1-206ENST00000514484 MT1HL1P0DM35 61 aa11.71□□□□□ -0.53
LPCAT1-206ENST00000514484 FAM19A5Q7Z5A7 132 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms