RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CAMK2N2Q96S95 79 aa6.53□□□□□ -1.36
HMGXB3-205ENST00000514469 IGHV3OR16-9A0A0B4J2B5 98 aa6.52□□□□□ -1.37
HMGXB3-205ENST00000514469 PRSS47A8MTI9 375 aa6.52□□□□□ -1.37
HMGXB3-205ENST00000514469 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.52□□□□□ -1.37
HMGXB3-205ENST00000514469 OPRPNQ99935 248 aaPredicted RBP6.52□□□□□ -1.37
HMGXB3-205ENST00000514469 LAMTOR2Q9Y2Q5 125 aa6.52□□□□□ -1.37
HMGXB3-205ENST00000514469 IFITM10A6NMD0 228 aa6.51□□□□□ -1.37
HMGXB3-205ENST00000514469 GAGE2BQ13066 116 aa6.51□□□□□ -1.37
HMGXB3-205ENST00000514469 RNF151Q2KHN1 245 aa6.51□□□□□ -1.37
HMGXB3-205ENST00000514469 ANAPC16Q96DE5 110 aa6.51□□□□□ -1.37
HMGXB3-205ENST00000514469 PYGO1Q9Y3Y4 419 aa6.51□□□□□ -1.37
HMGXB3-205ENST00000514469 IGLV4-3A0A075B6K6 122 aa6.5□□□□□ -1.37
HMGXB3-205ENST00000514469 MT-ND4LP03901 98 aa6.5□□□□□ -1.37
HMGXB3-205ENST00000514469 RAB5AP20339 215 aa6.5□□□□□ -1.37
HMGXB3-205ENST00000514469 IFI27P40305 119 aaPredicted RBP6.5□□□□□ -1.37
HMGXB3-205ENST00000514469 RAB14P61106 215 aa6.5□□□□□ -1.37
HMGXB3-205ENST00000514469 ORAOV1Q8WV07 137 aa6.5□□□□□ -1.37
HMGXB3-205ENST00000514469 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
HMGXB3-205ENST00000514469 F8WDY8 70 aa6.49□□□□□ -1.37
HMGXB3-205ENST00000514469 RPL18AQ02543 176 aaKnown RBP6.49□□□□□ -1.37
HMGXB3-205ENST00000514469 CLLU1Q5K131 121 aa6.49□□□□□ -1.37
HMGXB3-205ENST00000514469 Q6ZRP5 223 aa6.49□□□□□ -1.37
HMGXB3-205ENST00000514469 MAP1LC3AQ9H492 121 aa6.49□□□□□ -1.37
HMGXB3-205ENST00000514469 MRPL35Q9NZE8 188 aaKnown RBP6.49□□□□□ -1.37
HMGXB3-205ENST00000514469 UBR4Q5T4S7 5183 aa6.49□□□□□ -1.37
HMGXB3-205ENST00000514469 TGIF2-C20orf24A0A0A6YYL0 155 aa6.48□□□□□ -1.37
HMGXB3-205ENST00000514469 A0A0J9YXV3 536 aa6.48□□□□□ -1.37
HMGXB3-205ENST00000514469 A0A1W2PNN7 141 aa6.48□□□□□ -1.37
HMGXB3-205ENST00000514469 NDUFA1O15239 70 aa6.48□□□□□ -1.37
HMGXB3-205ENST00000514469 SPINK6Q6UWN8 80 aa6.48□□□□□ -1.37
HMGXB3-205ENST00000514469 Q8N8P6 123 aa6.48□□□□□ -1.37
HMGXB3-205ENST00000514469 TMEM141Q96I45 108 aa6.48□□□□□ -1.37
HMGXB3-205ENST00000514469 LINC01600Q96MT4 127 aa6.48□□□□□ -1.37
HMGXB3-205ENST00000514469 A0A087WZ39 114 aa6.47□□□□□ -1.37
HMGXB3-205ENST00000514469 LOC389332A0A1B0GUA5 103 aa6.47□□□□□ -1.37
HMGXB3-205ENST00000514469 ADCYAP1P18509 176 aa6.47□□□□□ -1.37
HMGXB3-205ENST00000514469 C9orf116Q5BN46 136 aaPredicted RBP6.47□□□□□ -1.37
HMGXB3-205ENST00000514469 LINC00242Q5T6M2 205 aa6.47□□□□□ -1.37
HMGXB3-205ENST00000514469 C10orf25Q5T742 122 aa6.47□□□□□ -1.37
HMGXB3-205ENST00000514469 NPSP0C0P6 89 aa6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 TLX1NBP0CAT3 122 aa6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 UBE2D1P51668 147 aa6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 SRSF9Q13242 221 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 KIAA0087Q14695 138 aa6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 ORMDL2Q53FV1 153 aa6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 C2orf66Q6UXQ4 117 aa6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 TEX43Q6ZNM6 134 aa6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 LINC00173Q6ZV60 143 aa6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 IMMP2LQ96T52 175 aa6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 C6orf48Q9UBA6 75 aa6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 CYSLTR1Q9Y271 337 aa6.46□□□□□ -1.38
HMGXB3-205ENST00000514469 K7EMI3 77 aa6.45□□□□□ -1.38
HMGXB3-205ENST00000514469 UQCC3Q6UW78 93 aa6.45□□□□□ -1.38
HMGXB3-205ENST00000514469 UNQ6190/PRO20217Q6UXQ8 127 aa6.45□□□□□ -1.38
HMGXB3-205ENST00000514469 AMELXQ99217 191 aa6.45□□□□□ -1.38
HMGXB3-205ENST00000514469 IGIPA6NJ69 53 aa6.44□□□□□ -1.38
HMGXB3-205ENST00000514469 REG3GQ6UW15 175 aa6.44□□□□□ -1.38
HMGXB3-205ENST00000514469 Q6ZN92 141 aa6.44□□□□□ -1.38
HMGXB3-205ENST00000514469 PHF5AQ7RTV0 110 aaKnown RBP6.44□□□□□ -1.38
HMGXB3-205ENST00000514469 FAM19A3Q7Z5A8 133 aa6.44□□□□□ -1.38
HMGXB3-205ENST00000514469 LINC01561Q8N1V8 128 aa6.44□□□□□ -1.38
HMGXB3-205ENST00000514469 C2orf88Q9BSF0 95 aa6.44□□□□□ -1.38
HMGXB3-205ENST00000514469 NXT2Q9NPJ8 142 aaKnown RBP6.44□□□□□ -1.38
HMGXB3-205ENST00000514469 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
HMGXB3-205ENST00000514469 TRAV9-1A0A075B6T8 112 aa6.43□□□□□ -1.38
HMGXB3-205ENST00000514469 TRBV30A0A0K0K1B3 111 aa6.43□□□□□ -1.38
HMGXB3-205ENST00000514469 TMEM218A2RU14 115 aa6.43□□□□□ -1.38
HMGXB3-205ENST00000514469 IFITM2Q01629 132 aa6.43□□□□□ -1.38
HMGXB3-205ENST00000514469 ZC2HC1BQ5TFG8 222 aa6.43□□□□□ -1.38
HMGXB3-205ENST00000514469 CTDSP1Q9GZU7 261 aa6.43□□□□□ -1.38
HMGXB3-205ENST00000514469 FAM168BA1KXE4 195 aa6.42□□□□□ -1.38
HMGXB3-205ENST00000514469 MT-ND6P03923 174 aa6.42□□□□□ -1.38
HMGXB3-205ENST00000514469 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
HMGXB3-205ENST00000514469 C2orf82Q6UX34 121 aa6.42□□□□□ -1.38
HMGXB3-205ENST00000514469 TIMM17AQ99595 171 aa6.42□□□□□ -1.38
HMGXB3-205ENST00000514469 VCX2Q9H322 139 aa6.42□□□□□ -1.38
HMGXB3-205ENST00000514469 FAM19A5Q7Z5A7 132 aaPredicted RBP6.41□□□□□ -1.38
HMGXB3-205ENST00000514469 TOMM6Q96B49 74 aa6.41□□□□□ -1.38
HMGXB3-205ENST00000514469 NDUFC2-KCTD14E9PQ53 114 aa6.4□□□□□ -1.38
HMGXB3-205ENST00000514469 G0S2P27469 103 aa6.4□□□□□ -1.38
HMGXB3-205ENST00000514469 KIAA1644Q3SXP7 199 aa6.4□□□□□ -1.38
HMGXB3-205ENST00000514469 GAGE2EQ4V326 116 aa6.4□□□□□ -1.38
HMGXB3-205ENST00000514469 C1orf137Q5JT78 98 aa6.4□□□□□ -1.38
HMGXB3-205ENST00000514469 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
HMGXB3-205ENST00000514469 KRTAP7-1Q8IUC3 87 aa6.4□□□□□ -1.38
HMGXB3-205ENST00000514469 Q8IZM0 81 aa6.4□□□□□ -1.38
HMGXB3-205ENST00000514469 SEC11CQ9BY50 192 aa6.4□□□□□ -1.38
HMGXB3-205ENST00000514469 GAGE2DQ9UEU5 116 aa6.4□□□□□ -1.38
HMGXB3-205ENST00000514469 HERVK_113P63121 156 aa6.39□□□□□ -1.39
HMGXB3-205ENST00000514469 SEC11AP67812 179 aa6.39□□□□□ -1.39
HMGXB3-205ENST00000514469 ODF1Q14990 250 aa6.39□□□□□ -1.39
HMGXB3-205ENST00000514469 KRTAP11-1Q8IUC1 163 aa6.39□□□□□ -1.39
HMGXB3-205ENST00000514469 PACRGQ96M98 296 aaPredicted RBP6.39□□□□□ -1.39
HMGXB3-205ENST00000514469 LRP2P98164 4655 aa6.38□□□□□ -1.39
HMGXB3-205ENST00000514469 LINC01546A6NGU7 62 aa6.38□□□□□ -1.39
HMGXB3-205ENST00000514469 M0QXV9 152 aa6.38□□□□□ -1.39
HMGXB3-205ENST00000514469 IGLV7-43P04211 117 aa6.38□□□□□ -1.39
HMGXB3-205ENST00000514469 PRSS2P07478 247 aa6.38□□□□□ -1.39
HMGXB3-205ENST00000514469 S100PP25815 95 aa6.38□□□□□ -1.39
HMGXB3-205ENST00000514469 C9orf129Q5T035 196 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms