RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 A0A0U1RRA0 63 aa9.07□□□□□ -0.96
SDHA-216ENST00000514027 ADARB2-AS1A8MUL3 147 aa9.07□□□□□ -0.96
SDHA-216ENST00000514027 TMEM86BQ8N661 226 aa9.07□□□□□ -0.96
SDHA-216ENST00000514027 TIMM21Q9BVV7 248 aa9.07□□□□□ -0.96
SDHA-216ENST00000514027 ESM1Q9NQ30 184 aa9.07□□□□□ -0.96
SDHA-216ENST00000514027 PYGO1Q9Y3Y4 419 aa9.07□□□□□ -0.96
SDHA-216ENST00000514027 FLNAP21333 2647 aaKnown RBP9.07□□□□□ -0.96
SDHA-216ENST00000514027 CCDC168Q8NDH2 2452 aa9.07□□□□□ -0.96
SDHA-216ENST00000514027 CXCL5P42830 114 aa9.07□□□□□ -0.96
SDHA-216ENST00000514027 FAM104AQ969W3 186 aa9.07□□□□□ -0.96
SDHA-216ENST00000514027 CHCHD7Q9BUK0 85 aa9.07□□□□□ -0.96
SDHA-216ENST00000514027 ICOSQ9Y6W8 199 aa9.07□□□□□ -0.96
SDHA-216ENST00000514027 NBPF19A0A087WUL8 3843 aa9.06□□□□□ -0.96
SDHA-216ENST00000514027 TRAV8-3A0A0A6YYJ7 113 aa9.06□□□□□ -0.96
SDHA-216ENST00000514027 CCL24O00175 119 aa9.06□□□□□ -0.96
SDHA-216ENST00000514027 C5orf38Q86SI9 138 aa9.06□□□□□ -0.96
SDHA-216ENST00000514027 LINC00467Q9BRT7 94 aa9.06□□□□□ -0.96
SDHA-216ENST00000514027 TRGV1A0A0A0MS02 117 aa9.05□□□□□ -0.96
SDHA-216ENST00000514027 IGHV3-53P01767 116 aa9.05□□□□□ -0.96
SDHA-216ENST00000514027 IGHV3-30-3P0DP02 117 aa9.05□□□□□ -0.96
SDHA-216ENST00000514027 HIST1H4AP62805 103 aaKnown RBP9.05□□□□□ -0.96
SDHA-216ENST00000514027 PIK3CD-AS1Q5SR53 167 aa9.05□□□□□ -0.96
SDHA-216ENST00000514027 UBE2D4Q9Y2X8 147 aa9.05□□□□□ -0.96
SDHA-216ENST00000514027 AKAP9Q99996 3911 aa9.05□□□□□ -0.96
SDHA-216ENST00000514027 ATOX1O00244 68 aa9.05□□□□□ -0.96
SDHA-216ENST00000514027 LST1O00453 97 aa9.05□□□□□ -0.96
SDHA-216ENST00000514027 DSCR8Q96T75 97 aa9.05□□□□□ -0.96
SDHA-216ENST00000514027 TENM4Q6N022 2769 aa9.04□□□□□ -0.96
SDHA-216ENST00000514027 MRPS36P82909 103 aaKnown RBP9.04□□□□□ -0.96
SDHA-216ENST00000514027 RS1O15537 224 aa9.04□□□□□ -0.96
SDHA-216ENST00000514027 SDIM1Q6ZPB5 146 aa9.04□□□□□ -0.96
SDHA-216ENST00000514027 CLEC2BQ92478 149 aa9.04□□□□□ -0.96
SDHA-216ENST00000514027 SETD2Q9BYW2 2564 aaPredicted RBP9.03□□□□□ -0.96
SDHA-216ENST00000514027 COX6CP09669 75 aa9.03□□□□□ -0.96
SDHA-216ENST00000514027 MALP21145 153 aa9.03□□□□□ -0.96
SDHA-216ENST00000514027 BEAN1Q3B7T3 259 aa9.03□□□□□ -0.96
SDHA-216ENST00000514027 C1orf158Q8N1D5 194 aa9.03□□□□□ -0.96
SDHA-216ENST00000514027 A0A0J9YXY3 114 aa9.03□□□□□ -0.96
SDHA-216ENST00000514027 NIPBLQ6KC79 2804 aaeCLIP9.02□□□□□ -0.96
SDHA-216ENST00000514027 IGHV1-58A0A0C4DH39 117 aa9.01□□□□□ -0.97
SDHA-216ENST00000514027 TINCRA0A1B0GVN0 87 aa9.01□□□□□ -0.97
SDHA-216ENST00000514027 NDUFA12Q9UI09 145 aa9.01□□□□□ -0.97
SDHA-216ENST00000514027 PRSS2P07478 247 aa9□□□□□ -0.97
SDHA-216ENST00000514027 Q6ZTI0 123 aa9□□□□□ -0.97
SDHA-216ENST00000514027 WFDC10AQ9H1F0 79 aa9□□□□□ -0.97
SDHA-216ENST00000514027 PLA2G2AP14555 144 aa9□□□□□ -0.97
SDHA-216ENST00000514027 NPC2P61916 151 aa9□□□□□ -0.97
SDHA-216ENST00000514027 PRO0628Q9UI54 55 aa9□□□□□ -0.97
SDHA-216ENST00000514027 LINC01006Q8NI28 216 aa8.99□□□□□ -0.97
SDHA-216ENST00000514027 VSIG2Q96IQ7 327 aa8.99□□□□□ -0.97
SDHA-216ENST00000514027 UPK3BQ9BT76 320 aa8.99□□□□□ -0.97
SDHA-216ENST00000514027 NOTCH3Q9UM47 2321 aa8.98□□□□□ -0.97
SDHA-216ENST00000514027 TRAV13-1A0A0B4J241 112 aa8.98□□□□□ -0.97
SDHA-216ENST00000514027 K7EQD1 137 aa8.98□□□□□ -0.97
SDHA-216ENST00000514027 RPL35AP18077 110 aaKnown RBP8.98□□□□□ -0.97
SDHA-216ENST00000514027 IL17DQ8TAD2 202 aa8.98□□□□□ -0.97
SDHA-216ENST00000514027 NOP10Q9NPE3 64 aaKnown RBP8.98□□□□□ -0.97
SDHA-216ENST00000514027 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
SDHA-216ENST00000514027 SETXQ7Z333 2677 aaKnown RBP8.98□□□□□ -0.97
SDHA-216ENST00000514027 RPL36AP83881 106 aaKnown RBP8.97□□□□□ -0.97
SDHA-216ENST00000514027 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
SDHA-216ENST00000514027 RPL36ALQ969Q0 106 aaKnown RBP8.97□□□□□ -0.97
SDHA-216ENST00000514027 ACANP16112 2415 aa8.97□□□□□ -0.97
SDHA-216ENST00000514027 JMJD1CQ15652 2540 aa8.97□□□□□ -0.97
SDHA-216ENST00000514027 ADAMTSL4-AS1Q5T5F5 129 aa8.97□□□□□ -0.97
SDHA-216ENST00000514027 LITAFQ99732 161 aa8.97□□□□□ -0.97
SDHA-216ENST00000514027 J3QKU1 62 aa8.96□□□□□ -0.98
SDHA-216ENST00000514027 KRTAP1-1Q07627 177 aa8.96□□□□□ -0.98
SDHA-216ENST00000514027 SERP2Q8N6R1 65 aa8.96□□□□□ -0.98
SDHA-216ENST00000514027 MTORP42345 2549 aa8.96□□□□□ -0.98
SDHA-216ENST00000514027 COX6A2Q02221 97 aa8.95□□□□□ -0.98
SDHA-216ENST00000514027 PDZD2O15018 2839 aa8.95□□□□□ -0.98
SDHA-216ENST00000514027 TRGV2A0A075B6R0 118 aa8.95□□□□□ -0.98
SDHA-216ENST00000514027 RNASE1P07998 156 aaKnown RBP8.95□□□□□ -0.98
SDHA-216ENST00000514027 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.95□□□□□ -0.98
SDHA-216ENST00000514027 DAND5Q8N907 189 aa8.95□□□□□ -0.98
SDHA-216ENST00000514027 HELZ2Q9BYK8 2649 aaKnown RBP8.94□□□□□ -0.98
SDHA-216ENST00000514027 MIAQ16674 131 aa8.94□□□□□ -0.98
SDHA-216ENST00000514027 GIG44P09565 113 aaPredicted RBP8.93□□□□□ -0.98
SDHA-216ENST00000514027 PFN2P35080 140 aa8.93□□□□□ -0.98
SDHA-216ENST00000514027 NTM-AS1Q6ZSK4 140 aa8.93□□□□□ -0.98
SDHA-216ENST00000514027 TRBV10-1A0A0K0K1A3 114 aa8.93□□□□□ -0.98
SDHA-216ENST00000514027 DAZ2Q13117 558 aaKnown RBP8.93□□□□□ -0.98
SDHA-216ENST00000514027 DAZ4Q86SG3 579 aaKnown RBP8.93□□□□□ -0.98
SDHA-216ENST00000514027 ZNF625Q96I27 306 aaPredicted RBP8.93□□□□□ -0.98
SDHA-216ENST00000514027 DAZ3Q9NR90 486 aaKnown RBP8.93□□□□□ -0.98
SDHA-216ENST00000514027 LINC00242Q5T6M2 205 aa8.92□□□□□ -0.98
SDHA-216ENST00000514027 LINC00336Q6ZUF6 198 aa8.92□□□□□ -0.98
SDHA-216ENST00000514027 C16orf74Q96GX8 76 aa8.92□□□□□ -0.98
SDHA-216ENST00000514027 C16orf95Q9H693 158 aa8.92□□□□□ -0.98
SDHA-216ENST00000514027 LOC100131303A0A0U1RQF7 123 aa8.92□□□□□ -0.98
SDHA-216ENST00000514027 UBE2L6O14933 153 aa8.92□□□□□ -0.98
SDHA-216ENST00000514027 ITPR2Q14571 2701 aa8.91□□□□□ -0.98
SDHA-216ENST00000514027 IGLV5-45A0A087WSX0 123 aa8.91□□□□□ -0.98
SDHA-216ENST00000514027 IGLV1-51P01701 117 aa8.91□□□□□ -0.98
SDHA-216ENST00000514027 C6orf226Q5I0X4 101 aa8.91□□□□□ -0.98
SDHA-216ENST00000514027 NDUFA1O15239 70 aa8.9□□□□□ -0.98
SDHA-216ENST00000514027 CMC4P56277 68 aaPredicted RBP8.9□□□□□ -0.98
SDHA-216ENST00000514027 Q9H8V8 135 aa8.9□□□□□ -0.98
SDHA-216ENST00000514027 PLAC8L1A1L4L8 177 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms