RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 CCDC32Q9BV29 185 aa6.24□□□□□ -1.41
SFXN1-210ENST00000513725 V9GYH0 126 aa6.24□□□□□ -1.41
SFXN1-210ENST00000513725 F2Z2F3 143 aa6.23□□□□□ -1.41
SFXN1-210ENST00000513725 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
SFXN1-210ENST00000513725 KIAA0087Q14695 138 aa6.23□□□□□ -1.41
SFXN1-210ENST00000513725 C2orf82Q6UX34 121 aa6.23□□□□□ -1.41
SFXN1-210ENST00000513725 SLC7A5P1Q8MH63 180 aa6.23□□□□□ -1.41
SFXN1-210ENST00000513725 GNB1LQ9BYB4 327 aa6.23□□□□□ -1.41
SFXN1-210ENST00000513725 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
SFXN1-210ENST00000513725 TMEM242Q9NWH2 141 aa6.23□□□□□ -1.41
SFXN1-210ENST00000513725 KMT2DO14686 5537 aa6.22□□□□□ -1.41
SFXN1-210ENST00000513725 C9orf92A6NGG3 77 aa6.22□□□□□ -1.41
SFXN1-210ENST00000513725 BTCP35070 178 aa6.22□□□□□ -1.41
SFXN1-210ENST00000513725 DEFA1P59665 94 aa6.22□□□□□ -1.41
SFXN1-210ENST00000513725 RPS20P60866 119 aaKnown RBP6.22□□□□□ -1.41
SFXN1-210ENST00000513725 TRIQKQ629K1 86 aa6.22□□□□□ -1.41
SFXN1-210ENST00000513725 TEX261Q6UWH6 196 aa6.22□□□□□ -1.41
SFXN1-210ENST00000513725 STOML3Q8TAV4 291 aa6.22□□□□□ -1.41
SFXN1-210ENST00000513725 TCEAL7Q9BRU2 100 aa6.22□□□□□ -1.41
SFXN1-210ENST00000513725 S100A9P06702 114 aaKnown RBP6.21□□□□□ -1.42
SFXN1-210ENST00000513725 RPL32P62910 135 aaKnown RBP6.21□□□□□ -1.42
SFXN1-210ENST00000513725 FAM19A1Q7Z5A9 133 aa6.21□□□□□ -1.42
SFXN1-210ENST00000513725 MRPL18Q9H0U6 180 aaKnown RBP6.21□□□□□ -1.42
SFXN1-210ENST00000513725 RAB19A4D1S5 217 aa6.2□□□□□ -1.42
SFXN1-210ENST00000513725 INMT-MINDY4F8WBC2 141 aa6.2□□□□□ -1.42
SFXN1-210ENST00000513725 MT1FP04733 61 aa6.2□□□□□ -1.42
SFXN1-210ENST00000513725 ATP6V0CP27449 155 aa6.2□□□□□ -1.42
SFXN1-210ENST00000513725 BAGE2Q86Y30 109 aa6.2□□□□□ -1.42
SFXN1-210ENST00000513725 CBLN2Q8IUK8 224 aa6.2□□□□□ -1.42
SFXN1-210ENST00000513725 KRTAP10-10P60014 251 aa6.19□□□□□ -1.42
SFXN1-210ENST00000513725 Q6ZUT4 128 aa6.19□□□□□ -1.42
SFXN1-210ENST00000513725 SPRR4Q96PI1 79 aa6.19□□□□□ -1.42
SFXN1-210ENST00000513725 RNASE7Q9H1E1 156 aaKnown RBP6.19□□□□□ -1.42
SFXN1-210ENST00000513725 MDN1Q9NU22 5596 aa6.18□□□□□ -1.42
SFXN1-210ENST00000513725 TRBV6-5A0A0K0K1A5 114 aa6.18□□□□□ -1.42
SFXN1-210ENST00000513725 CCDC160A6NGH7 325 aa6.18□□□□□ -1.42
SFXN1-210ENST00000513725 SERF2P84101 59 aa6.18□□□□□ -1.42
SFXN1-210ENST00000513725 TWIST1Q15672 202 aa6.18□□□□□ -1.42
SFXN1-210ENST00000513725 PSMG3Q9BT73 122 aaPredicted RBP6.18□□□□□ -1.42
SFXN1-210ENST00000513725 XKRY2A2RUG3 117 aa6.17□□□□□ -1.42
SFXN1-210ENST00000513725 SIX6O95475 246 aa6.17□□□□□ -1.42
SFXN1-210ENST00000513725 IFNA1P01562 189 aa6.17□□□□□ -1.42
SFXN1-210ENST00000513725 CST9LP1Q5W188 147 aa6.17□□□□□ -1.42
SFXN1-210ENST00000513725 ST20Q9HBF5 79 aa6.17□□□□□ -1.42
SFXN1-210ENST00000513725 TNFSF18Q9UNG2 199 aa6.17□□□□□ -1.42
SFXN1-210ENST00000513725 ZNF706Q9Y5V0 76 aaPredicted RBP6.17□□□□□ -1.42
SFXN1-210ENST00000513725 IGKV2-28A0A075B6P5 120 aa6.16□□□□□ -1.42
SFXN1-210ENST00000513725 TGIF2-C20orf24A0A0A6YYL0 155 aa6.16□□□□□ -1.42
SFXN1-210ENST00000513725 IGKV2D-28P01615 120 aa6.16□□□□□ -1.42
SFXN1-210ENST00000513725 FHITP49789 147 aa6.16□□□□□ -1.42
SFXN1-210ENST00000513725 HIGD2AQ9BW72 106 aa6.16□□□□□ -1.42
SFXN1-210ENST00000513725 GEMIN7Q9H840 131 aaKnown RBP6.16□□□□□ -1.42
SFXN1-210ENST00000513725 GPR98Q8WXG9 6306 aa6.15□□□□□ -1.42
SFXN1-210ENST00000513725 CTXND1A0A1B0GTU2 59 aa6.15□□□□□ -1.42
SFXN1-210ENST00000513725 SMIM15Q7Z3B0 74 aa6.15□□□□□ -1.42
SFXN1-210ENST00000513725 NKAPP1Q8N9T2 125 aa6.15□□□□□ -1.42
SFXN1-210ENST00000513725 BATF3Q9NR55 127 aa6.15□□□□□ -1.42
SFXN1-210ENST00000513725 PET100P0DJ07 73 aa6.14□□□□□ -1.43
SFXN1-210ENST00000513725 FCER1GP30273 86 aa6.14□□□□□ -1.43
SFXN1-210ENST00000513725 CKS1BP61024 79 aa6.14□□□□□ -1.43
SFXN1-210ENST00000513725 NUDT15Q9NV35 164 aa6.14□□□□□ -1.43
SFXN1-210ENST00000513725 PRSS2P07478 247 aa6.13□□□□□ -1.43
SFXN1-210ENST00000513725 LGALS3P17931 250 aaKnown RBP6.13□□□□□ -1.43
SFXN1-210ENST00000513725 ZNF726P1Q15940 193 aa6.13□□□□□ -1.43
SFXN1-210ENST00000513725 LINC01551Q86U37 167 aa6.13□□□□□ -1.43
SFXN1-210ENST00000513725 PPP1R1CQ8WVI7 109 aa6.13□□□□□ -1.43
SFXN1-210ENST00000513725 TIMM21Q9BVV7 248 aa6.13□□□□□ -1.43
SFXN1-210ENST00000513725 TMEM126AQ9H061 195 aa6.13□□□□□ -1.43
SFXN1-210ENST00000513725 IGLV5-37A0A075B6J1 123 aa6.12□□□□□ -1.43
SFXN1-210ENST00000513725 TRBV27A0A0K0K1C4 114 aa6.12□□□□□ -1.43
SFXN1-210ENST00000513725 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
SFXN1-210ENST00000513725 C9orf62Q8N4C0 152 aa6.12□□□□□ -1.43
SFXN1-210ENST00000513725 TMEM18Q96B42 140 aa6.12□□□□□ -1.43
SFXN1-210ENST00000513725 IGLV6-57P01721 117 aa6.11□□□□□ -1.43
SFXN1-210ENST00000513725 POLR2KP53803 58 aaKnown RBP6.11□□□□□ -1.43
SFXN1-210ENST00000513725 SSBP3-AS1Q7Z2R9 100 aa6.11□□□□□ -1.43
SFXN1-210ENST00000513725 IFITM10A6NMD0 228 aa6.1□□□□□ -1.43
SFXN1-210ENST00000513725 TMEM238C9JI98 176 aa6.1□□□□□ -1.43
SFXN1-210ENST00000513725 MPC2O95563 127 aa6.1□□□□□ -1.43
SFXN1-210ENST00000513725 H2AFB2P0C5Z0 115 aa6.1□□□□□ -1.43
SFXN1-210ENST00000513725 S100A1P23297 94 aa6.1□□□□□ -1.43
SFXN1-210ENST00000513725 CNFNQ9BYD5 112 aa6.1□□□□□ -1.43
SFXN1-210ENST00000513725 SCO2A0A1W2PP80 73 aa6.09□□□□□ -1.43
SFXN1-210ENST00000513725 ATP6V1G1O75348 118 aa6.09□□□□□ -1.43
SFXN1-210ENST00000513725 ATP6V1G2O95670 118 aa6.09□□□□□ -1.43
SFXN1-210ENST00000513725 HBBP68871 147 aa6.09□□□□□ -1.43
SFXN1-210ENST00000513725 MOBPQ13875 183 aa6.09□□□□□ -1.43
SFXN1-210ENST00000513725 C6orf226Q5I0X4 101 aa6.09□□□□□ -1.43
SFXN1-210ENST00000513725 CHTOPQ9Y3Y2 248 aaKnown RBP6.09□□□□□ -1.43
SFXN1-210ENST00000513725 VCYO14598 125 aa6.08□□□□□ -1.44
SFXN1-210ENST00000513725 NOL3O60936 208 aaKnown RBP6.08□□□□□ -1.44
SFXN1-210ENST00000513725 TOMM7Q9P0U1 55 aa6.08□□□□□ -1.44
SFXN1-210ENST00000513725 C20orf202A1L168 122 aa6.07□□□□□ -1.44
SFXN1-210ENST00000513725 M0R378 163 aa6.07□□□□□ -1.44
SFXN1-210ENST00000513725 TMUB2Q71RG4 321 aa6.07□□□□□ -1.44
SFXN1-210ENST00000513725 LINC01561Q8N1V8 128 aa6.07□□□□□ -1.44
SFXN1-210ENST00000513725 IGLV9-49A0A0B4J1Y8 123 aa6.06□□□□□ -1.44
SFXN1-210ENST00000513725 LYRM1O43325 122 aa6.06□□□□□ -1.44
SFXN1-210ENST00000513725 PAGE4O60829 102 aa6.06□□□□□ -1.44
SFXN1-210ENST00000513725 SCO1O75880 301 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms