RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 COX7A2LO14548 114 aa7.77□□□□□ -1.17
VEGFA-216ENST00000512683 MALP21145 153 aa7.77□□□□□ -1.17
VEGFA-216ENST00000512683 SMIM2Q9BVW6 85 aa7.77□□□□□ -1.17
VEGFA-216ENST00000512683 RNF213Q63HN8 5207 aa7.76□□□□□ -1.17
VEGFA-216ENST00000512683 TRAV13-1A0A0B4J241 112 aa7.76□□□□□ -1.17
VEGFA-216ENST00000512683 APOMO95445 188 aa7.76□□□□□ -1.17
VEGFA-216ENST00000512683 S100A8P05109 93 aa7.76□□□□□ -1.17
VEGFA-216ENST00000512683 RNF151Q2KHN1 245 aa7.76□□□□□ -1.17
VEGFA-216ENST00000512683 TMEM18Q96B42 140 aa7.76□□□□□ -1.17
VEGFA-216ENST00000512683 TCAPO15273 167 aa7.75□□□□□ -1.17
VEGFA-216ENST00000512683 PPBPP02775 128 aa7.75□□□□□ -1.17
VEGFA-216ENST00000512683 GAGE2BQ13066 116 aa7.75□□□□□ -1.17
VEGFA-216ENST00000512683 ATP5L2Q7Z4Y8 100 aa7.75□□□□□ -1.17
VEGFA-216ENST00000512683 OPRPNQ99935 248 aaPredicted RBP7.75□□□□□ -1.17
VEGFA-216ENST00000512683 UQCC3Q6UW78 93 aa7.74□□□□□ -1.17
VEGFA-216ENST00000512683 C5orf38Q86SI9 138 aa7.74□□□□□ -1.17
VEGFA-216ENST00000512683 CAMK2N2Q96S95 79 aa7.74□□□□□ -1.17
VEGFA-216ENST00000512683 A0A1W2PNN7 141 aa7.73□□□□□ -1.17
VEGFA-216ENST00000512683 MRPS36P82909 103 aaKnown RBP7.73□□□□□ -1.17
VEGFA-216ENST00000512683 TMEM136Q6ZRR5 245 aa7.73□□□□□ -1.17
VEGFA-216ENST00000512683 ORMDL3Q8N138 153 aa7.73□□□□□ -1.17
VEGFA-216ENST00000512683 SPANXA1Q9NS26 97 aa7.73□□□□□ -1.17
VEGFA-216ENST00000512683 IGHV3OR16-9A0A0B4J2B5 98 aa7.72□□□□□ -1.17
VEGFA-216ENST00000512683 PRSS47A8MTI9 375 aa7.72□□□□□ -1.17
VEGFA-216ENST00000512683 MT-ND6P03923 174 aa7.72□□□□□ -1.17
VEGFA-216ENST00000512683 PNRC1Q12796 327 aaPredicted RBP7.72□□□□□ -1.17
VEGFA-216ENST00000512683 C9orf116Q5BN46 136 aaPredicted RBP7.72□□□□□ -1.17
VEGFA-216ENST00000512683 PRELID3AQ96N28 172 aa7.72□□□□□ -1.17
VEGFA-216ENST00000512683 IMMP2LQ96T52 175 aa7.72□□□□□ -1.17
VEGFA-216ENST00000512683 PSORS1C2Q9UIG4 136 aa7.72□□□□□ -1.17
VEGFA-216ENST00000512683 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.71□□□□□ -1.18
VEGFA-216ENST00000512683 OR10D4PQ8NGN7 298 aa7.71□□□□□ -1.18
VEGFA-216ENST00000512683 DIRC1Q969H9 104 aa7.71□□□□□ -1.18
VEGFA-216ENST00000512683 MRPL35Q9NZE8 188 aaKnown RBP7.71□□□□□ -1.18
VEGFA-216ENST00000512683 ODF1Q14990 250 aa7.7□□□□□ -1.18
VEGFA-216ENST00000512683 ANAPC16Q96DE5 110 aa7.7□□□□□ -1.18
VEGFA-216ENST00000512683 MT-ND4LP03901 98 aa7.69□□□□□ -1.18
VEGFA-216ENST00000512683 RAB5AP20339 215 aa7.69□□□□□ -1.18
VEGFA-216ENST00000512683 SPAG11BQ08648 103 aa7.69□□□□□ -1.18
VEGFA-216ENST00000512683 PYGO1Q9Y3Y4 419 aa7.69□□□□□ -1.18
VEGFA-216ENST00000512683 IGLV4-3A0A075B6K6 122 aa7.68□□□□□ -1.18
VEGFA-216ENST00000512683 LOC389332A0A1B0GUA5 103 aa7.68□□□□□ -1.18
VEGFA-216ENST00000512683 IFITM10A6NMD0 228 aa7.68□□□□□ -1.18
VEGFA-216ENST00000512683 TLX1NBP0CAT3 122 aa7.68□□□□□ -1.18
VEGFA-216ENST00000512683 C1orf137Q5JT78 98 aa7.68□□□□□ -1.18
VEGFA-216ENST00000512683 LAMTOR2Q9Y2Q5 125 aa7.68□□□□□ -1.18
VEGFA-216ENST00000512683 IGLV7-43P04211 117 aa7.67□□□□□ -1.18
VEGFA-216ENST00000512683 IFI27P40305 119 aaPredicted RBP7.67□□□□□ -1.18
VEGFA-216ENST00000512683 RPL18AQ02543 176 aaKnown RBP7.67□□□□□ -1.18
VEGFA-216ENST00000512683 C10orf25Q5T742 122 aa7.67□□□□□ -1.18
VEGFA-216ENST00000512683 ORAOV1Q8WV07 137 aa7.67□□□□□ -1.18
VEGFA-216ENST00000512683 MAP1LC3AQ9H492 121 aa7.67□□□□□ -1.18
VEGFA-216ENST00000512683 NDUFA1O15239 70 aa7.66□□□□□ -1.18
VEGFA-216ENST00000512683 LINC00242Q5T6M2 205 aa7.66□□□□□ -1.18
VEGFA-216ENST00000512683 Q8N8P6 123 aa7.66□□□□□ -1.18
VEGFA-216ENST00000512683 TMEM141Q96I45 108 aa7.66□□□□□ -1.18
VEGFA-216ENST00000512683 IGLV1-50A0A075B6I6 118 aa7.65□□□□□ -1.18
VEGFA-216ENST00000512683 A0A087WZ39 114 aa7.65□□□□□ -1.18
VEGFA-216ENST00000512683 ADCYAP1P18509 176 aa7.65□□□□□ -1.18
VEGFA-216ENST00000512683 KIAA0087Q14695 138 aa7.65□□□□□ -1.18
VEGFA-216ENST00000512683 UNQ6190/PRO20217Q6UXQ8 127 aa7.65□□□□□ -1.18
VEGFA-216ENST00000512683 LINC00173Q6ZV60 143 aa7.65□□□□□ -1.18
VEGFA-216ENST00000512683 PHF5AQ7RTV0 110 aaKnown RBP7.65□□□□□ -1.18
VEGFA-216ENST00000512683 TGIF2-C20orf24A0A0A6YYL0 155 aa7.64□□□□□ -1.19
VEGFA-216ENST00000512683 TMEM218A2RU14 115 aa7.64□□□□□ -1.19
VEGFA-216ENST00000512683 ZC2HC1BQ5TFG8 222 aa7.64□□□□□ -1.19
VEGFA-216ENST00000512683 SVBPQ8N300 66 aa7.64□□□□□ -1.19
VEGFA-216ENST00000512683 IGIPA6NJ69 53 aa7.63□□□□□ -1.19
VEGFA-216ENST00000512683 H0Y9J4 135 aa7.63□□□□□ -1.19
VEGFA-216ENST00000512683 APOC3P02656 99 aa7.63□□□□□ -1.19
VEGFA-216ENST00000512683 UBE2D1P51668 147 aa7.63□□□□□ -1.19
VEGFA-216ENST00000512683 C2orf66Q6UXQ4 117 aa7.63□□□□□ -1.19
VEGFA-216ENST00000512683 AMELXQ99217 191 aa7.63□□□□□ -1.19
VEGFA-216ENST00000512683 SEC11CQ9BY50 192 aa7.63□□□□□ -1.19
VEGFA-216ENST00000512683 C6orf48Q9UBA6 75 aa7.63□□□□□ -1.19
VEGFA-216ENST00000512683 CYSLTR1Q9Y271 337 aa7.63□□□□□ -1.19
VEGFA-216ENST00000512683 K7EMI3 77 aa7.62□□□□□ -1.19
VEGFA-216ENST00000512683 SNAPINO95295 136 aa7.62□□□□□ -1.19
VEGFA-216ENST00000512683 TEX43Q6ZNM6 134 aa7.62□□□□□ -1.19
VEGFA-216ENST00000512683 LINC01561Q8N1V8 128 aa7.62□□□□□ -1.19
VEGFA-216ENST00000512683 CTDSP1Q9GZU7 261 aa7.62□□□□□ -1.19
VEGFA-216ENST00000512683 TRBV30A0A0K0K1B3 111 aa7.61□□□□□ -1.19
VEGFA-216ENST00000512683 FAM168BA1KXE4 195 aa7.61□□□□□ -1.19
VEGFA-216ENST00000512683 RPL13AP40429 203 aaKnown RBP7.61□□□□□ -1.19
VEGFA-216ENST00000512683 ORMDL2Q53FV1 153 aa7.61□□□□□ -1.19
VEGFA-216ENST00000512683 C10orf91Q5T1B1 145 aa7.61□□□□□ -1.19
VEGFA-216ENST00000512683 NXT2Q9NPJ8 142 aaKnown RBP7.61□□□□□ -1.19
VEGFA-216ENST00000512683 TMA7Q9Y2S6 64 aaKnown RBP7.61□□□□□ -1.19
VEGFA-216ENST00000512683 CARHSP1Q9Y2V2 147 aaKnown RBP7.61□□□□□ -1.19
VEGFA-216ENST00000512683 NPSP0C0P6 89 aa7.6□□□□□ -1.19
VEGFA-216ENST00000512683 KIAA1644Q3SXP7 199 aa7.6□□□□□ -1.19
VEGFA-216ENST00000512683 C2orf82Q6UX34 121 aa7.6□□□□□ -1.19
VEGFA-216ENST00000512683 FAM19A3Q7Z5A8 133 aa7.6□□□□□ -1.19
VEGFA-216ENST00000512683 KRTAP7-1Q8IUC3 87 aa7.6□□□□□ -1.19
VEGFA-216ENST00000512683 PRR26Q8N8Z3 221 aa7.6□□□□□ -1.19
VEGFA-216ENST00000512683 Q6ZN92 141 aa7.59□□□□□ -1.19
VEGFA-216ENST00000512683 KRTAP11-1Q8IUC1 163 aa7.59□□□□□ -1.19
VEGFA-216ENST00000512683 C2orf88Q9BSF0 95 aa7.59□□□□□ -1.19
VEGFA-216ENST00000512683 VCX2Q9H322 139 aa7.59□□□□□ -1.19
VEGFA-216ENST00000512683 TRAV9-1A0A075B6T8 112 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms