RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 RPL39LQ96EH5 51 aaKnown RBP5.79□□□□□ -1.48
NUP54-211ENST00000512151 AP5S1Q9NUS5 200 aa5.79□□□□□ -1.48
NUP54-211ENST00000512151 GAGE12JA6NER3 117 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 LINC01546A6NGU7 62 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 NCR2O95944 276 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 CKS2P33552 79 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 GAGE1Q13065 139 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 GAGE4Q13068 117 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 GAGE5Q13069 117 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 RHOHQ15669 191 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 GAGE13Q4V321 117 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 FA2HQ7L5A8 372 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 SH2D6Q7Z4S9 175 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 MIEN1Q9BRT3 115 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 HSPB8Q9UJY1 196 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 PAM16Q9Y3D7 125 aa5.78□□□□□ -1.48
NUP54-211ENST00000512151 PRSS47A8MTI9 375 aa5.77□□□□□ -1.49
NUP54-211ENST00000512151 SYS1-DBNDD2H3BUS1 97 aa5.77□□□□□ -1.49
NUP54-211ENST00000512151 NPYP01303 97 aa5.77□□□□□ -1.49
NUP54-211ENST00000512151 IFI27P40305 119 aaPredicted RBP5.77□□□□□ -1.49
NUP54-211ENST00000512151 PET117Q6UWS5 81 aa5.77□□□□□ -1.49
NUP54-211ENST00000512151 NRACQ8N912 160 aa5.77□□□□□ -1.49
NUP54-211ENST00000512151 PRADC1Q9BSG0 188 aa5.77□□□□□ -1.49
NUP54-211ENST00000512151 TRBV10-1A0A0K0K1A3 114 aa5.76□□□□□ -1.49
NUP54-211ENST00000512151 UBE2D3P61077 147 aa5.76□□□□□ -1.49
NUP54-211ENST00000512151 UBE2D2P62837 147 aa5.76□□□□□ -1.49
NUP54-211ENST00000512151 SPATA45Q537H7 98 aa5.76□□□□□ -1.49
NUP54-211ENST00000512151 LINC00173Q6ZV60 143 aa5.76□□□□□ -1.49
NUP54-211ENST00000512151 MRAP2Q96G30 205 aa5.76□□□□□ -1.49
NUP54-211ENST00000512151 C2orf88Q9BSF0 95 aa5.76□□□□□ -1.49
NUP54-211ENST00000512151 MAP1LC3CQ9BXW4 147 aa5.76□□□□□ -1.49
NUP54-211ENST00000512151 MAP1LC3AQ9H492 121 aa5.76□□□□□ -1.49
NUP54-211ENST00000512151 TRBV7-3A0A075B6L6 115 aa5.75□□□□□ -1.49
NUP54-211ENST00000512151 IGKV2D-24A0A075B6R9 120 aa5.75□□□□□ -1.49
NUP54-211ENST00000512151 A0A096LNJ9 63 aa5.75□□□□□ -1.49
NUP54-211ENST00000512151 TRBV6-5A0A0K0K1A5 114 aa5.75□□□□□ -1.49
NUP54-211ENST00000512151 IGLC3P0DOY3 106 aa5.75□□□□□ -1.49
NUP54-211ENST00000512151 NXT2Q9NPJ8 142 aaKnown RBP5.75□□□□□ -1.49
NUP54-211ENST00000512151 COX11Q9Y6N1 276 aa5.75□□□□□ -1.49
NUP54-211ENST00000512151 LOC389332A0A1B0GUA5 103 aa5.74□□□□□ -1.49
NUP54-211ENST00000512151 H7C1H1 209 aa5.74□□□□□ -1.49
NUP54-211ENST00000512151 K7EMI3 77 aa5.74□□□□□ -1.49
NUP54-211ENST00000512151 TNFRSF6BO95407 300 aa5.74□□□□□ -1.49
NUP54-211ENST00000512151 POLR2KP53803 58 aaKnown RBP5.74□□□□□ -1.49
NUP54-211ENST00000512151 RPL36AP83881 106 aaKnown RBP5.74□□□□□ -1.49
NUP54-211ENST00000512151 LINC01545Q5VT33 79 aa5.74□□□□□ -1.49
NUP54-211ENST00000512151 SDIM1Q6ZPB5 146 aa5.74□□□□□ -1.49
NUP54-211ENST00000512151 NTM-AS1Q6ZSK4 140 aa5.74□□□□□ -1.49
NUP54-211ENST00000512151 RPL36ALQ969Q0 106 aaKnown RBP5.74□□□□□ -1.49
NUP54-211ENST00000512151 GTSF1LQ9H1H1 148 aa5.74□□□□□ -1.49
NUP54-211ENST00000512151 UQCR10Q9UDW1 63 aa5.74□□□□□ -1.49
NUP54-211ENST00000512151 M0R143 59 aa5.73□□□□□ -1.49
NUP54-211ENST00000512151 PPP1R17O96001 155 aa5.73□□□□□ -1.49
NUP54-211ENST00000512151 HBDP02042 147 aa5.73□□□□□ -1.49
NUP54-211ENST00000512151 CIRBPQ14011 172 aaKnown RBP5.73□□□□□ -1.49
NUP54-211ENST00000512151 ATOH7Q8N100 152 aa5.73□□□□□ -1.49
NUP54-211ENST00000512151 Q8N8P6 123 aa5.73□□□□□ -1.49
NUP54-211ENST00000512151 SNHG12Q9BXW3 62 aa5.73□□□□□ -1.49
NUP54-211ENST00000512151 ST20Q9HBF5 79 aa5.73□□□□□ -1.49
NUP54-211ENST00000512151 SDHAF1A6NFY7 115 aa5.72□□□□□ -1.49
NUP54-211ENST00000512151 LINC01549A6NIU2 74 aa5.72□□□□□ -1.49
NUP54-211ENST00000512151 PRSS1P07477 247 aa5.72□□□□□ -1.49
NUP54-211ENST00000512151 FCER1GP30273 86 aa5.72□□□□□ -1.49
NUP54-211ENST00000512151 MAJINQ3KP22 176 aa5.72□□□□□ -1.49
NUP54-211ENST00000512151 C9orf163Q8N9P6 203 aa5.72□□□□□ -1.49
NUP54-211ENST00000512151 RMI2Q96E14 147 aa5.72□□□□□ -1.49
NUP54-211ENST00000512151 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
NUP54-211ENST00000512151 SUMO2P61956 95 aaKnown RBP5.71□□□□□ -1.5
NUP54-211ENST00000512151 KLK12Q9UKR0 248 aa5.71□□□□□ -1.5
NUP54-211ENST00000512151 A0A087WYN8 130 aa5.7□□□□□ -1.5
NUP54-211ENST00000512151 TRBV27A0A0K0K1C4 114 aa5.7□□□□□ -1.5
NUP54-211ENST00000512151 USP17L23D6RBM5 183 aa5.7□□□□□ -1.5
NUP54-211ENST00000512151 EIF4EBP3O60516 100 aaPredicted RBP5.7□□□□□ -1.5
NUP54-211ENST00000512151 TSHBP01222 138 aa5.7□□□□□ -1.5
NUP54-211ENST00000512151 CHTF8P0CG12 524 aa5.7□□□□□ -1.5
NUP54-211ENST00000512151 G0S2P27469 103 aa5.7□□□□□ -1.5
NUP54-211ENST00000512151 PRR3P79522 188 aaKnown RBP5.7□□□□□ -1.5
NUP54-211ENST00000512151 C14orf177Q52M58 125 aa5.7□□□□□ -1.5
NUP54-211ENST00000512151 IFI27L1Q96BM0 104 aa5.7□□□□□ -1.5
NUP54-211ENST00000512151 C20orf78Q9BR46 151 aa5.7□□□□□ -1.5
NUP54-211ENST00000512151 TRBV6-8A0A0A6YYG3 113 aa5.69□□□□□ -1.5
NUP54-211ENST00000512151 TMEM238LA0A1B0GVL6 79 aa5.69□□□□□ -1.5
NUP54-211ENST00000512151 hDV102S1A0JD36 115 aa5.69□□□□□ -1.5
NUP54-211ENST00000512151 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
NUP54-211ENST00000512151 HSBP1L1C9JCN9 74 aa5.69□□□□□ -1.5
NUP54-211ENST00000512151 I3L3M4 83 aa5.69□□□□□ -1.5
NUP54-211ENST00000512151 VCYO14598 125 aa5.69□□□□□ -1.5
NUP54-211ENST00000512151 RPL32P62910 135 aaKnown RBP5.69□□□□□ -1.5
NUP54-211ENST00000512151 Q6ZN92 141 aa5.69□□□□□ -1.5
NUP54-211ENST00000512151 UBE2WQ96B02 151 aa5.69□□□□□ -1.5
NUP54-211ENST00000512151 CHCHD7Q9BUK0 85 aa5.69□□□□□ -1.5
NUP54-211ENST00000512151 SMIM2Q9BVW6 85 aa5.69□□□□□ -1.5
NUP54-211ENST00000512151 A0A1B0GV90 55 aa5.68□□□□□ -1.5
NUP54-211ENST00000512151 TCAPO15273 167 aa5.68□□□□□ -1.5
NUP54-211ENST00000512151 H0Y8G0 127 aa5.67□□□□□ -1.5
NUP54-211ENST00000512151 ATP5LO75964 103 aa5.67□□□□□ -1.5
NUP54-211ENST00000512151 COTL1Q14019 142 aa5.67□□□□□ -1.5
NUP54-211ENST00000512151 DGAT2L7PQ6IED9 249 aa5.67□□□□□ -1.5
NUP54-211ENST00000512151 REG3GQ6UW15 175 aa5.67□□□□□ -1.5
NUP54-211ENST00000512151 PMCHL2Q9BQD1 86 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms