RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 TMEM223A0PJW6 202 aa4.27□□□□□ -1.73
USP38-203ENST00000511739 ESRGQ1W209 222 aa4.27□□□□□ -1.73
USP38-203ENST00000511739 RETNLBQ9BQ08 111 aa4.27□□□□□ -1.73
USP38-203ENST00000511739 NAV3Q8IVL0 2385 aa4.27□□□□□ -1.73
USP38-203ENST00000511739 LOC100131303A0A0U1RQF7 123 aa4.27□□□□□ -1.73
USP38-203ENST00000511739 LINC00308Q8TCZ7 52 aa4.27□□□□□ -1.73
USP38-203ENST00000511739 IGLV4-3A0A075B6K6 122 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 BRWD1-AS2P59051 145 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 WISP2O76076 250 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 FRMD6-AS1P0C7T7 363 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 ZNF80P51504 273 aaPredicted RBP4.26□□□□□ -1.73
USP38-203ENST00000511739 Q6Q795 121 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 ZNF295-AS1Q8N0V1 137 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 TRBV6-5A0A0K0K1A5 114 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 NDUFC2-KCTD14E9PQ53 114 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 SPINK1P00995 79 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 C20orf173Q96LM9 149 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 LINC00959A0A1B0GUT2 108 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 A0A1B0GXF2 115 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 PROK1P58294 105 aa4.26□□□□□ -1.73
USP38-203ENST00000511739 MUC4Q99102 2169 aa4.25□□□□□ -1.73
USP38-203ENST00000511739 PTH2Q96A98 100 aa4.25□□□□□ -1.73
USP38-203ENST00000511739 IGHV6-1A0A0B4J1U7 121 aa4.25□□□□□ -1.73
USP38-203ENST00000511739 BRI3O95415 125 aa4.25□□□□□ -1.73
USP38-203ENST00000511739 ZNF73O43830 326 aaPredicted RBP4.25□□□□□ -1.73
USP38-203ENST00000511739 NDUFA7O95182 113 aa4.25□□□□□ -1.73
USP38-203ENST00000511739 IGLC6P0CF74 106 aa4.25□□□□□ -1.73
USP38-203ENST00000511739 ZNF22P17026 224 aaPredicted RBP4.25□□□□□ -1.73
USP38-203ENST00000511739 GDF5OSQ5U4N7 250 aa4.25□□□□□ -1.73
USP38-203ENST00000511739 DSCAMO60469 2012 aa4.25□□□□□ -1.73
USP38-203ENST00000511739 ADAMTS20P59510 1910 aa4.25□□□□□ -1.73
USP38-203ENST00000511739 NHLRC4P0CG21 123 aaPredicted RBP4.25□□□□□ -1.73
USP38-203ENST00000511739 C6orf223Q8N319 242 aa4.25□□□□□ -1.73
USP38-203ENST00000511739 C18orf65Q6ZTR6 163 aa4.24□□□□□ -1.73
USP38-203ENST00000511739 M0QY20 66 aa4.24□□□□□ -1.73
USP38-203ENST00000511739 REG3GQ6UW15 175 aa4.24□□□□□ -1.73
USP38-203ENST00000511739 LIMD2Q9BT23 127 aa4.24□□□□□ -1.73
USP38-203ENST00000511739 C2orf48Q96LS8 159 aa4.24□□□□□ -1.73
USP38-203ENST00000511739 A0A0C4DFX4 3053 aa4.24□□□□□ -1.73
USP38-203ENST00000511739 HCFC1P51610 2035 aa4.24□□□□□ -1.73
USP38-203ENST00000511739 FAM229AH3BQW9 127 aa4.24□□□□□ -1.73
USP38-203ENST00000511739 PLA2G1BP04054 148 aaKnown RBP4.24□□□□□ -1.73
USP38-203ENST00000511739 CYSRT1A8MQ03 144 aa4.23□□□□□ -1.73
USP38-203ENST00000511739 FAM30AQ9NZY2 134 aa4.23□□□□□ -1.73
USP38-203ENST00000511739 COX17Q14061 63 aa4.23□□□□□ -1.73
USP38-203ENST00000511739 NAV2Q8IVL1 2488 aa4.23□□□□□ -1.73
USP38-203ENST00000511739 TRBV7-6A0A0J9YX20 115 aa4.23□□□□□ -1.73
USP38-203ENST00000511739 TRBV27A0A0K0K1C4 114 aa4.23□□□□□ -1.73
USP38-203ENST00000511739 A0A0U1RQV1 116 aa4.23□□□□□ -1.73
USP38-203ENST00000511739 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.23□□□□□ -1.73
USP38-203ENST00000511739 NDUFC1O43677 76 aa4.23□□□□□ -1.73
USP38-203ENST00000511739 C11orf71Q6IPW1 123 aa4.23□□□□□ -1.73
USP38-203ENST00000511739 J3QL48 77 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 NDUFV3P56181 108 aaKnown RBP4.22□□□□□ -1.73
USP38-203ENST00000511739 EBI3Q14213 229 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 RNF185Q96GF1 192 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 NUPR1O60356 82 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 ATP5EP56381 51 aaPredicted RBP4.22□□□□□ -1.73
USP38-203ENST00000511739 Q6ZTC4 211 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 MUC7Q8TAX7 377 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 SNURFQ9Y675 71 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 CDPF1Q6NVV7 123 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 CHCHD7Q9BUK0 85 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 EGFEM1PQ0D2K5 195 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 TRBV30A0A0K0K1B3 111 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 UQCRQO14949 82 aa4.22□□□□□ -1.73
USP38-203ENST00000511739 Q6JHZ5 121 aa4.21□□□□□ -1.74
USP38-203ENST00000511739 Q8IZM0 81 aa4.21□□□□□ -1.74
USP38-203ENST00000511739 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.74
USP38-203ENST00000511739 LINC00208Q96KT6 92 aa4.21□□□□□ -1.74
USP38-203ENST00000511739 YPEL4Q96NS1 127 aa4.21□□□□□ -1.74
USP38-203ENST00000511739 CENPFP49454 3210 aa4.21□□□□□ -1.74
USP38-203ENST00000511739 XGP55808 180 aa4.21□□□□□ -1.74
USP38-203ENST00000511739 TRIAP1O43715 76 aa4.2□□□□□ -1.74
USP38-203ENST00000511739 COX6A2Q02221 97 aa4.2□□□□□ -1.74
USP38-203ENST00000511739 C22orf34Q6ZV56 151 aa4.2□□□□□ -1.74
USP38-203ENST00000511739 Q9BRP9 147 aa4.2□□□□□ -1.74
USP38-203ENST00000511739 A8MZ25 164 aa4.2□□□□□ -1.74
USP38-203ENST00000511739 POM121L12Q8N7R1 296 aa4.2□□□□□ -1.74
USP38-203ENST00000511739 CELA1Q9UNI1 258 aa4.2□□□□□ -1.74
USP38-203ENST00000511739 UNQ6190/PRO20217Q6UXQ8 127 aa4.2□□□□□ -1.74
USP38-203ENST00000511739 MBD6Q96DN6 1003 aa4.2□□□□□ -1.74
USP38-203ENST00000511739 SMIM11BQ8TCY0 68 aa4.2□□□□□ -1.74
USP38-203ENST00000511739 MKI67P46013 3256 aaKnown RBP4.2□□□□□ -1.74
USP38-203ENST00000511739 PRM2P04554 102 aa4.19□□□□□ -1.74
USP38-203ENST00000511739 C1orf229Q6ZS94 237 aaPredicted RBP4.19□□□□□ -1.74
USP38-203ENST00000511739 TIMM17BO60830 172 aa4.19□□□□□ -1.74
USP38-203ENST00000511739 TSHBP01222 138 aa4.19□□□□□ -1.74
USP38-203ENST00000511739 MRPS36P82909 103 aaKnown RBP4.19□□□□□ -1.74
USP38-203ENST00000511739 LINC01547P58512 204 aaPredicted RBP4.18□□□□□ -1.74
USP38-203ENST00000511739 KRTAP10-9P60411 292 aa4.18□□□□□ -1.74
USP38-203ENST00000511739 PCOTHQ58A44 107 aa4.18□□□□□ -1.74
USP38-203ENST00000511739 Q6ZS46 218 aa4.18□□□□□ -1.74
USP38-203ENST00000511739 hDV103S1A0JD37 113 aa4.18□□□□□ -1.74
USP38-203ENST00000511739 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
USP38-203ENST00000511739 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
USP38-203ENST00000511739 IGLV1-40P01703 118 aa4.18□□□□□ -1.74
USP38-203ENST00000511739 TRBV10-3A0A0K0K1G6 114 aa4.17□□□□□ -1.74
USP38-203ENST00000511739 IGLV1-51P01701 117 aa4.17□□□□□ -1.74
USP38-203ENST00000511739 SPACA4Q8TDM5 124 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms