RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 P01737 135 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 HIGD2BQ4VC39 106 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 ISOC2Q96AB3 205 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 RPS10P5Q9NQ39 176 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 A0A0J9YXV3 536 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 SMIM17P0DL12 118 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 BAGE2Q86Y30 109 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 HIST3H2BBQ8N257 126 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 C7orf33Q8WU49 177 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 GTSF1Q8WW33 167 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 C2orf88Q9BSF0 95 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 TMEM243Q9BU79 118 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 A0A096LNI7 61 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 UMAD1C9J7I0 102 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 HIST1H2BKO60814 126 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 HIST1H2BJP06899 126 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 IGLC6P0CF74 106 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 HIST1H2BOP23527 126 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 HIST1H2BBP33778 126 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 HIST1H2BDP58876 126 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 KRTAP10-8P60410 259 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 HIST1H2BCP62807 126 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 HIST2H2BEQ16778 126 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.12□□□□□ -1.75
COPS4-209ENST00000511653 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 HIST1H2BHQ93079 126 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 HIST1H2BNQ99877 126 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 HIST1H2BMQ99879 126 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 DPH3P1Q9H4G8 78 aa4.12□□□□□ -1.75
COPS4-209ENST00000511653 IGKV3OR2-268A0A0C4DH90 116 aa4.11□□□□□ -1.75
COPS4-209ENST00000511653 RPS10P46783 165 aaKnown RBP4.11□□□□□ -1.75
COPS4-209ENST00000511653 FAM213BQ8TBF2 198 aa4.11□□□□□ -1.75
COPS4-209ENST00000511653 PGLYRP4Q96LB8 373 aa4.11□□□□□ -1.75
COPS4-209ENST00000511653 A0A1B0GV90 55 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 F8WDY8 70 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 H7C1H1 209 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 GAS8-AS1O95177 125 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 SRP19P09132 144 aaKnown RBP4.1□□□□□ -1.75
COPS4-209ENST00000511653 DDTP30046 118 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 COA6Q5JTJ3 125 aaKnown RBP4.1□□□□□ -1.75
COPS4-209ENST00000511653 RASL11AQ6T310 242 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 FER1L6-AS1Q8NA97 138 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 MBD3L1Q8WWY6 194 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 VCX2Q9H322 139 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 GVQW2A0A096LPI5 108 aaPredicted RBP4.1□□□□□ -1.75
COPS4-209ENST00000511653 UBE2L6O14933 153 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 CENPWQ5EE01 88 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 Q6ZVQ6 151 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 OR2D3Q8NGH3 330 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 CHCHD10Q8WYQ3 142 aaPredicted RBP4.1□□□□□ -1.75
COPS4-209ENST00000511653 LINC00526Q96FQ7 95 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 TMEM242Q9NWH2 141 aa4.1□□□□□ -1.75
COPS4-209ENST00000511653 TRBV24-1A0A075B6N3 115 aa4.09□□□□□ -1.76
COPS4-209ENST00000511653 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.09□□□□□ -1.76
COPS4-209ENST00000511653 TRAV1-1A0A0B4J248 108 aa4.09□□□□□ -1.76
COPS4-209ENST00000511653 TRAV26-2A0A0B4J265 109 aa4.09□□□□□ -1.76
COPS4-209ENST00000511653 IGKV2-29A2NJV5 120 aaPredicted RBP4.09□□□□□ -1.76
COPS4-209ENST00000511653 C19orf71A6NCJ1 209 aa4.09□□□□□ -1.76
COPS4-209ENST00000511653 S100A2P29034 98 aa4.09□□□□□ -1.76
COPS4-209ENST00000511653 C11orf52Q96A22 123 aa4.09□□□□□ -1.76
COPS4-209ENST00000511653 TRBV20OR9-2A0A075B6H5 130 aa4.08□□□□□ -1.76
COPS4-209ENST00000511653 CACNG7P62955 275 aa4.08□□□□□ -1.76
COPS4-209ENST00000511653 CCL20P78556 96 aa4.08□□□□□ -1.76
COPS4-209ENST00000511653 JOSD1Q15040 202 aaPredicted RBP4.08□□□□□ -1.76
COPS4-209ENST00000511653 SPINK6Q6UWN8 80 aa4.08□□□□□ -1.76
COPS4-209ENST00000511653 LYZL1Q6UWQ5 148 aa4.08□□□□□ -1.76
COPS4-209ENST00000511653 GATD1Q8NB37 220 aa4.08□□□□□ -1.76
COPS4-209ENST00000511653 OR10D4PQ8NGN7 298 aa4.08□□□□□ -1.76
COPS4-209ENST00000511653 RPL39LQ96EH5 51 aaKnown RBP4.08□□□□□ -1.76
COPS4-209ENST00000511653 HIST1H2BLQ99880 126 aa4.08□□□□□ -1.76
COPS4-209ENST00000511653 EIF5A2Q9GZV4 153 aaKnown RBP4.08□□□□□ -1.76
COPS4-209ENST00000511653 TSTD3H0UI37 97 aa4.07□□□□□ -1.76
COPS4-209ENST00000511653 PPP1R2P9O14990 202 aa4.07□□□□□ -1.76
COPS4-209ENST00000511653 TRGC1P0CF51 173 aa4.07□□□□□ -1.76
COPS4-209ENST00000511653 NTF3P20783 257 aa4.07□□□□□ -1.76
COPS4-209ENST00000511653 NDUFA6P56556 154 aa4.07□□□□□ -1.76
COPS4-209ENST00000511653 REG3GQ6UW15 175 aa4.07□□□□□ -1.76
COPS4-209ENST00000511653 TGIF2-C20orf24A0A0A6YYL0 155 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 ZNF727A8MUV8 499 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 TRGC2P03986 189 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 FGF6P10767 208 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 CTRLP40313 264 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 XCL1P47992 114 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 RPS20P60866 119 aaKnown RBP4.06□□□□□ -1.76
COPS4-209ENST00000511653 HERV-K104P63124 156 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 RNASEKQ6P5S7 137 aaKnown RBP4.06□□□□□ -1.76
COPS4-209ENST00000511653 GNG13Q9P2W3 67 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 F2Z2F3 143 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 IFNA1P01562 189 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 FOXA3P55318 350 aaPredicted RBP4.06□□□□□ -1.76
COPS4-209ENST00000511653 AMMECR1LQ6DCA0 310 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 MRPL52Q86TS9 123 aaKnown RBP4.06□□□□□ -1.76
COPS4-209ENST00000511653 CARD19Q96LW7 228 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 PACRGQ96M98 296 aaPredicted RBP4.06□□□□□ -1.76
COPS4-209ENST00000511653 CNFNQ9BYD5 112 aa4.06□□□□□ -1.76
COPS4-209ENST00000511653 CCL25O15444 150 aa4.05□□□□□ -1.76
COPS4-209ENST00000511653 APCSP02743 223 aa4.05□□□□□ -1.76
COPS4-209ENST00000511653 FABP4P15090 132 aa4.05□□□□□ -1.76
COPS4-209ENST00000511653 GNG4P50150 75 aa4.05□□□□□ -1.76
COPS4-209ENST00000511653 ZNF664Q8N3J9 261 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms