RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 SPINT3P49223 89 aa3.43□□□□□ -1.86
NUP54-210ENST00000510884 FXYD3Q14802 87 aa3.43□□□□□ -1.86
NUP54-210ENST00000510884 CXCL17Q6UXB2 119 aa3.43□□□□□ -1.86
NUP54-210ENST00000510884 LYPD6Q86Y78 171 aa3.43□□□□□ -1.86
NUP54-210ENST00000510884 MUSTN1Q8IVN3 82 aa3.43□□□□□ -1.86
NUP54-210ENST00000510884 TMEM254Q8TBM7 123 aa3.43□□□□□ -1.86
NUP54-210ENST00000510884 DYSFO75923 2080 aa3.43□□□□□ -1.86
NUP54-210ENST00000510884 PTPRSQ13332 1948 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 OTOGQ6ZRI0 2925 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 THADAQ6YHU6 1953 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 AKAP13Q12802 2813 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 IGLV3-12A0A075B6K2 115 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 IGKV6-21A0A0C4DH24 114 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 A0A0J9YY99 117 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 CPSF4LA6NMK7 179 aaKnown RBP3.42□□□□□ -1.86
NUP54-210ENST00000510884 K7ERS5 55 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 CHTF8P0CG12 524 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 TSPEAR-AS2P59090 65 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 ELOF1P60002 83 aaKnown RBP3.42□□□□□ -1.86
NUP54-210ENST00000510884 REG3AQ06141 175 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 FAM229BQ4G0N7 80 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 Q5VV11 94 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 LINC01560Q8TB33 94 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 B9D2Q9BPU9 175 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 UBL5Q9BZL1 73 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 SND1-IT1Q9HBX3 110 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 SCN3AQ9NY46 2000 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 LRP4O75096 1905 aa3.42□□□□□ -1.86
NUP54-210ENST00000510884 LRBAP50851 2863 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 GTF3C1Q12789 2109 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 IGLV3-16A0A075B6K0 115 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 NBPF19A0A087WUL8 3843 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 IGHV3-35A0A0C4DH35 117 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 LOC730098B7Z3J9 87 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 NDUFB1O75438 58 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 IGHV3-11P01762 117 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 ARMS2P0C7Q2 107 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 COX6B1P14854 86 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 HMGA1P17096 107 aaKnown RBP3.41□□□□□ -1.86
NUP54-210ENST00000510884 MIAQ16674 131 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 C17orf58Q2M2W7 97 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 FAM74A4Q5TZK3 123 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 SFTA2Q6UW10 78 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 Q6ZR03 302 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 IMMP1LQ96LU5 166 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 TIMM8BQ9Y5J9 83 aaPredicted RBP3.41□□□□□ -1.86
NUP54-210ENST00000510884 LHFPL6Q9Y693 200 aa3.41□□□□□ -1.86
NUP54-210ENST00000510884 MTORP42345 2549 aa3.4□□□□□ -1.86
NUP54-210ENST00000510884 LRRK2Q5S007 2527 aa3.4□□□□□ -1.86
NUP54-210ENST00000510884 SNRNP200O75643 2136 aaKnown RBP3.4□□□□□ -1.86
NUP54-210ENST00000510884 TRAV40A0A0B4J280 105 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 LOC101927531A0A1B0GV80 90 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 A6NED7 52 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 IGHV1-69P01742 117 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 IGHV3-30-3P0DP02 117 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 ATRQ13535 2644 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 C10orf128Q5T292 105 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 Q8N814 137 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 CNEP1R1Q8N9A8 125 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 CAMK2N2Q96S95 79 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 DEFB126Q9BYW3 111 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 TTTY13Q9BZ97 58 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 LINC00574Q9H8X3 128 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 BRWD1Q9NSI6 2320 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 CSMD1Q96PZ7 3565 aa3.4□□□□□ -1.87
NUP54-210ENST00000510884 TRPM6Q9BX84 2022 aa3.39□□□□□ -1.87
NUP54-210ENST00000510884 IGHV3-43A0A0B4J1X8 118 aa3.39□□□□□ -1.87
NUP54-210ENST00000510884 IGKV3D-7A0A0C4DH55 119 aa3.39□□□□□ -1.87
NUP54-210ENST00000510884 IGKV1-6A0A0C4DH72 117 aa3.39□□□□□ -1.87
NUP54-210ENST00000510884 TRBV6-1A0A0K0K1D8 114 aa3.39□□□□□ -1.87
NUP54-210ENST00000510884 IGKV1-39P01597 117 aa3.39□□□□□ -1.87
NUP54-210ENST00000510884 IGKV1D-39P04432 117 aa3.39□□□□□ -1.87
NUP54-210ENST00000510884 PRR4Q16378 134 aa3.39□□□□□ -1.87
NUP54-210ENST00000510884 ZFAND2AQ8N6M9 145 aa3.39□□□□□ -1.87
NUP54-210ENST00000510884 KLF14Q8TD94 323 aaPredicted RBP3.39□□□□□ -1.87
NUP54-210ENST00000510884 CDC42SE2Q9NRR3 84 aa3.39□□□□□ -1.87
NUP54-210ENST00000510884 NCOA6Q14686 2063 aaPredicted RBP3.39□□□□□ -1.87
NUP54-210ENST00000510884 KIAA2026Q5HYC2 2103 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 A0A087WVE0 104 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 A0A0J9YXY3 114 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 JMJD7-PLA2G4BH0Y9G9 81 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 M0R3E3 92 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 PSCAO43653 123 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 CISD3P0C7P0 127 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 CCL3P10147 92 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 RPL28P46779 137 aaKnown RBP3.38□□□□□ -1.87
NUP54-210ENST00000510884 SPANXN5Q5MJ07 72 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 CASC10Q5T4H9 136 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 ARHGAP5-AS1Q96IT6 56 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 OBSCN-AS1Q96MR7 158 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 SMIM14Q96QK8 99 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 C14orf132Q9NPU4 83 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 TMEM14CQ9P0S9 112 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 R4GMQ9 66 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 PLXNA2O75051 1894 aa3.38□□□□□ -1.87
NUP54-210ENST00000510884 RP1L1Q8IWN7 2480 aaPredicted RBP3.37□□□□□ -1.87
NUP54-210ENST00000510884 FLNCQ14315 2725 aa3.37□□□□□ -1.87
NUP54-210ENST00000510884 IGHV3-21A0A0B4J1V1 117 aa3.37□□□□□ -1.87
NUP54-210ENST00000510884 M0R135 149 aa3.37□□□□□ -1.87
NUP54-210ENST00000510884 HMGN4O00479 90 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 551.3 ms