RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 OVOL2Q9BRP0 275 aa10.81□□□□□ -0.68
USP38-202ENST00000510377 LOC100131303A0A0U1RQF7 123 aa10.8□□□□□ -0.68
USP38-202ENST00000510377 DEFB114Q30KQ6 69 aa10.8□□□□□ -0.68
USP38-202ENST00000510377 TMEM89A2RUT3 159 aa10.8□□□□□ -0.68
USP38-202ENST00000510377 LINC00242Q5T6M2 205 aa10.8□□□□□ -0.68
USP38-202ENST00000510377 SDIM1Q6ZPB5 146 aa10.8□□□□□ -0.68
USP38-202ENST00000510377 TIRAPP58753 221 aa10.79□□□□□ -0.68
USP38-202ENST00000510377 LINC00643Q86TS7 51 aa10.79□□□□□ -0.68
USP38-202ENST00000510377 ATRQ13535 2644 aa10.79□□□□□ -0.68
USP38-202ENST00000510377 WFDC10AQ9H1F0 79 aa10.79□□□□□ -0.68
USP38-202ENST00000510377 A0A1B0GX51 115 aa10.78□□□□□ -0.68
USP38-202ENST00000510377 DEFB121Q5J5C9 76 aa10.78□□□□□ -0.68
USP38-202ENST00000510377 RNF152Q8N8N0 203 aa10.78□□□□□ -0.68
USP38-202ENST00000510377 ZNF702PQ9H963 129 aa10.78□□□□□ -0.68
USP38-202ENST00000510377 LAMA5O15230 3695 aa10.78□□□□□ -0.68
USP38-202ENST00000510377 MAST4O15021 2626 aa10.78□□□□□ -0.68
USP38-202ENST00000510377 INAFM1C9JVW0 142 aa10.77□□□□□ -0.69
USP38-202ENST00000510377 ANGP03950 147 aaKnown RBP10.76□□□□□ -0.69
USP38-202ENST00000510377 IGSF10Q6WRI0 2623 aa10.76□□□□□ -0.69
USP38-202ENST00000510377 GYPEP15421 78 aa10.76□□□□□ -0.69
USP38-202ENST00000510377 HAMPP81172 84 aa10.75□□□□□ -0.69
USP38-202ENST00000510377 Q6YL49 198 aa10.75□□□□□ -0.69
USP38-202ENST00000510377 CITED2Q99967 270 aaPredicted RBP10.75□□□□□ -0.69
USP38-202ENST00000510377 SMIM1B2RUZ4 78 aa10.75□□□□□ -0.69
USP38-202ENST00000510377 EIF4EBP3O60516 100 aaPredicted RBP10.75□□□□□ -0.69
USP38-202ENST00000510377 SBSPONQ8IVN8 264 aa10.75□□□□□ -0.69
USP38-202ENST00000510377 SMR3AQ99954 134 aa10.75□□□□□ -0.69
USP38-202ENST00000510377 TRBV10-1A0A0K0K1A3 114 aa10.74□□□□□ -0.69
USP38-202ENST00000510377 NCR3O14931 201 aa10.74□□□□□ -0.69
USP38-202ENST00000510377 DEFB4AO15263 64 aa10.74□□□□□ -0.69
USP38-202ENST00000510377 TIMM17BO60830 172 aa10.74□□□□□ -0.69
USP38-202ENST00000510377 C4orf3Q8WVX3 66 aa10.74□□□□□ -0.69
USP38-202ENST00000510377 ORMDL1Q9P0S3 153 aa10.74□□□□□ -0.69
USP38-202ENST00000510377 ITPR3Q14573 2671 aa10.74□□□□□ -0.69
USP38-202ENST00000510377 IGHV4-31P0DP07 118 aa10.74□□□□□ -0.69
USP38-202ENST00000510377 Q8N2B8 174 aa10.74□□□□□ -0.69
USP38-202ENST00000510377 TMEM126AQ9H061 195 aa10.74□□□□□ -0.69
USP38-202ENST00000510377 TRACP01848 142 aa10.73□□□□□ -0.69
USP38-202ENST00000510377 CITED1Q99966 193 aa10.73□□□□□ -0.69
USP38-202ENST00000510377 FLNAP21333 2647 aaKnown RBP10.73□□□□□ -0.69
USP38-202ENST00000510377 H0YGX0 51 aa10.73□□□□□ -0.69
USP38-202ENST00000510377 CMC4P56277 68 aaPredicted RBP10.72□□□□□ -0.69
USP38-202ENST00000510377 SETXQ7Z333 2677 aaKnown RBP10.72□□□□□ -0.69
USP38-202ENST00000510377 MGAM2Q2M2H8 2515 aa10.72□□□□□ -0.69
USP38-202ENST00000510377 ASH1LQ9NR48 2969 aaKnown RBP10.71□□□□□ -0.69
USP38-202ENST00000510377 C16orf74Q96GX8 76 aa10.71□□□□□ -0.69
USP38-202ENST00000510377 ODF3L2Q3SX64 289 aa10.71□□□□□ -0.7
USP38-202ENST00000510377 F5H768 121 aa10.7□□□□□ -0.7
USP38-202ENST00000510377 UBL5Q9BZL1 73 aa10.7□□□□□ -0.7
USP38-202ENST00000510377 KLK9Q2XQG4 91 aa10.7□□□□□ -0.7
USP38-202ENST00000510377 LRRC75A-AS1Q8N1F1 130 aa10.7□□□□□ -0.7
USP38-202ENST00000510377 CDC42SE2Q9NRR3 84 aa10.7□□□□□ -0.7
USP38-202ENST00000510377 SMG1Q96Q15 3661 aaKnown RBP10.7□□□□□ -0.7
USP38-202ENST00000510377 SMIM11BQ8TCY0 68 aa10.7□□□□□ -0.7
USP38-202ENST00000510377 hADV29S1A0JD25 119 aa10.69□□□□□ -0.7
USP38-202ENST00000510377 BRI3O95415 125 aa10.69□□□□□ -0.7
USP38-202ENST00000510377 Q6Q795 121 aa10.69□□□□□ -0.7
USP38-202ENST00000510377 ATOX1O00244 68 aa10.69□□□□□ -0.7
USP38-202ENST00000510377 COL12A1Q99715 3063 aa10.69□□□□□ -0.7
USP38-202ENST00000510377 LITAFQ99732 161 aa10.69□□□□□ -0.7
USP38-202ENST00000510377 C1orf158Q8N1D5 194 aa10.68□□□□□ -0.7
USP38-202ENST00000510377 SOSTDC1Q6X4U4 206 aa10.67□□□□□ -0.7
USP38-202ENST00000510377 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.67□□□□□ -0.7
USP38-202ENST00000510377 FLNCQ14315 2725 aa10.67□□□□□ -0.7
USP38-202ENST00000510377 LY6G6DO95868 133 aa10.67□□□□□ -0.7
USP38-202ENST00000510377 KLK5Q9Y337 293 aaPredicted RBP10.67□□□□□ -0.7
USP38-202ENST00000510377 CCL18P55774 89 aa10.66□□□□□ -0.7
USP38-202ENST00000510377 C3orf22Q8N5N4 141 aa10.66□□□□□ -0.7
USP38-202ENST00000510377 TRAV23DV6A0A075B6W5 121 aa10.66□□□□□ -0.7
USP38-202ENST00000510377 DNAJC9-AS1A6NH13 148 aa10.66□□□□□ -0.7
USP38-202ENST00000510377 UQCRQO14949 82 aa10.66□□□□□ -0.7
USP38-202ENST00000510377 FAM240AA0A1B0GVK7 77 aa10.66□□□□□ -0.7
USP38-202ENST00000510377 RELNP78509 3460 aa10.65□□□□□ -0.7
USP38-202ENST00000510377 A0A087WVE0 104 aa10.65□□□□□ -0.7
USP38-202ENST00000510377 DAD1P61803 113 aa10.65□□□□□ -0.7
USP38-202ENST00000510377 IGLV4-60A0A075B6I1 120 aa10.65□□□□□ -0.7
USP38-202ENST00000510377 A0A087WYN8 130 aa10.65□□□□□ -0.7
USP38-202ENST00000510377 TRBV6-8A0A0A6YYG3 113 aa10.64□□□□□ -0.71
USP38-202ENST00000510377 M0QXV9 152 aa10.64□□□□□ -0.71
USP38-202ENST00000510377 NHLRC4P0CG21 123 aaPredicted RBP10.64□□□□□ -0.71
USP38-202ENST00000510377 TRAV25A0A0B4J276 109 aa10.64□□□□□ -0.71
USP38-202ENST00000510377 PRR3P79522 188 aaKnown RBP10.64□□□□□ -0.71
USP38-202ENST00000510377 C11orf72Q8NBR9 251 aa10.64□□□□□ -0.71
USP38-202ENST00000510377 WFDC9Q8NEX5 89 aa10.63□□□□□ -0.71
USP38-202ENST00000510377 LINC00526Q96FQ7 95 aa10.63□□□□□ -0.71
USP38-202ENST00000510377 NTM-AS1Q6ZSK4 140 aa10.63□□□□□ -0.71
USP38-202ENST00000510377 LINC00269Q8N2A0 174 aa10.62□□□□□ -0.71
USP38-202ENST00000510377 LINC00337Q8N6G1 96 aa10.62□□□□□ -0.71
USP38-202ENST00000510377 FAM218AQ96MZ4 157 aa10.62□□□□□ -0.71
USP38-202ENST00000510377 CSMD1Q96PZ7 3565 aa10.62□□□□□ -0.71
USP38-202ENST00000510377 BEAN1Q3B7T3 259 aa10.61□□□□□ -0.71
USP38-202ENST00000510377 IBA57-AS1B1ANH7 110 aa10.6□□□□□ -0.71
USP38-202ENST00000510377 IMUPQ9GZP8 106 aa10.6□□□□□ -0.71
USP38-202ENST00000510377 DEFB135Q30KP9 77 aa10.6□□□□□ -0.71
USP38-202ENST00000510377 DSCR8Q96T75 97 aa10.6□□□□□ -0.71
USP38-202ENST00000510377 J3KT08 172 aa10.6□□□□□ -0.71
USP38-202ENST00000510377 GHRHP01286 108 aa10.59□□□□□ -0.71
USP38-202ENST00000510377 CXCL5P42830 114 aa10.59□□□□□ -0.71
USP38-202ENST00000510377 IGLV5-39A0A0G2JS06 123 aa10.59□□□□□ -0.71
USP38-202ENST00000510377 RPL18AQ02543 176 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms