RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 A0A1B0GUV1 79 aa12.29□□□□□ -0.44
SFXN1-208ENST00000507823 CHCHD5Q9BSY4 110 aa12.29□□□□□ -0.44
SFXN1-208ENST00000507823 PRO1854Q9UHT4 67 aa12.29□□□□□ -0.44
SFXN1-208ENST00000507823 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.28□□□□□ -0.44
SFXN1-208ENST00000507823 PAX4O43316 350 aa12.28□□□□□ -0.44
SFXN1-208ENST00000507823 EGFEM1PQ0D2K5 195 aa12.28□□□□□ -0.44
SFXN1-208ENST00000507823 ZNF625Q96I27 306 aaPredicted RBP12.28□□□□□ -0.44
SFXN1-208ENST00000507823 FLNBO75369 2602 aaKnown RBP12.27□□□□□ -0.44
SFXN1-208ENST00000507823 CMYA5Q8N3K9 4069 aa12.27□□□□□ -0.44
SFXN1-208ENST00000507823 TRAV26-1A0A087WT03 109 aa12.27□□□□□ -0.45
SFXN1-208ENST00000507823 IFITM1P13164 125 aa12.27□□□□□ -0.45
SFXN1-208ENST00000507823 DAD1P61803 113 aa12.27□□□□□ -0.45
SFXN1-208ENST00000507823 CELA1Q9UNI1 258 aa12.27□□□□□ -0.45
SFXN1-208ENST00000507823 DEFB4AO15263 64 aa12.26□□□□□ -0.45
SFXN1-208ENST00000507823 NBEAL2Q6ZNJ1 2754 aa12.26□□□□□ -0.45
SFXN1-208ENST00000507823 IGHV3OR16-9A0A0B4J2B5 98 aa12.25□□□□□ -0.45
SFXN1-208ENST00000507823 IGHV3-33P01772 117 aa12.25□□□□□ -0.45
SFXN1-208ENST00000507823 ATP5G1P05496 136 aa12.25□□□□□ -0.45
SFXN1-208ENST00000507823 SPART-AS1P0CW21 52 aa12.25□□□□□ -0.45
SFXN1-208ENST00000507823 OCIAD2Q56VL3 154 aa12.25□□□□□ -0.45
SFXN1-208ENST00000507823 KRTAP10-11P60412 298 aa12.25□□□□□ -0.45
SFXN1-208ENST00000507823 SHISA2Q6UWI4 295 aa12.25□□□□□ -0.45
SFXN1-208ENST00000507823 Q9H8V8 135 aa12.25□□□□□ -0.45
SFXN1-208ENST00000507823 PPDPFQ9H3Y8 114 aa12.24□□□□□ -0.45
SFXN1-208ENST00000507823 F8W1H4 67 aa12.24□□□□□ -0.45
SFXN1-208ENST00000507823 HERV-K104P63124 156 aa12.24□□□□□ -0.45
SFXN1-208ENST00000507823 LYRM7Q5U5X0 104 aa12.24□□□□□ -0.45
SFXN1-208ENST00000507823 OXLD1Q5BKU9 147 aa12.24□□□□□ -0.45
SFXN1-208ENST00000507823 PRO0461Q9UI25 63 aa12.23□□□□□ -0.45
SFXN1-208ENST00000507823 TEX48A0A1B0GUV7 120 aa12.23□□□□□ -0.45
SFXN1-208ENST00000507823 RBX1P62877 108 aa12.23□□□□□ -0.45
SFXN1-208ENST00000507823 A0A087WZ39 114 aa12.22□□□□□ -0.45
SFXN1-208ENST00000507823 LINC00959A0A1B0GUT2 108 aa12.22□□□□□ -0.45
SFXN1-208ENST00000507823 H3BMG7 143 aa12.22□□□□□ -0.45
SFXN1-208ENST00000507823 CIRBPQ14011 172 aaKnown RBP12.22□□□□□ -0.45
SFXN1-208ENST00000507823 DNAH3Q8TD57 4116 aa12.22□□□□□ -0.45
SFXN1-208ENST00000507823 BAHCC1Q9P281 2608 aa12.21□□□□□ -0.46
SFXN1-208ENST00000507823 PRSS2P07478 247 aa12.21□□□□□ -0.46
SFXN1-208ENST00000507823 C3orf56Q8N813 242 aa12.2□□□□□ -0.46
SFXN1-208ENST00000507823 TRBV20-1A0A075B6N2 111 aa12.2□□□□□ -0.46
SFXN1-208ENST00000507823 ERG28Q9UKR5 140 aa12.2□□□□□ -0.46
SFXN1-208ENST00000507823 SH2D6Q7Z4S9 175 aa12.19□□□□□ -0.46
SFXN1-208ENST00000507823 LINC01561Q8N1V8 128 aa12.19□□□□□ -0.46
SFXN1-208ENST00000507823 PRIMA1Q86XR5 153 aa12.19□□□□□ -0.46
SFXN1-208ENST00000507823 COX7B2Q8TF08 81 aa12.19□□□□□ -0.46
SFXN1-208ENST00000507823 LOC107984156A0A0G2JMH3 177 aa12.18□□□□□ -0.46
SFXN1-208ENST00000507823 MRPL23Q16540 153 aaKnown RBP12.18□□□□□ -0.46
SFXN1-208ENST00000507823 ARL17AQ8IVW1 177 aa12.18□□□□□ -0.46
SFXN1-208ENST00000507823 LINC00308Q8TCZ7 52 aa12.18□□□□□ -0.46
SFXN1-208ENST00000507823 K7ERU9 68 aa12.17□□□□□ -0.46
SFXN1-208ENST00000507823 COPS9Q8WXC6 57 aa12.17□□□□□ -0.46
SFXN1-208ENST00000507823 TMEM262E9PQX1 116 aa12.17□□□□□ -0.46
SFXN1-208ENST00000507823 A0A096LPF7 62 aa12.16□□□□□ -0.46
SFXN1-208ENST00000507823 TRBV30A0A0K0K1B3 111 aa12.16□□□□□ -0.46
SFXN1-208ENST00000507823 WFDC2Q14508 124 aa12.16□□□□□ -0.46
SFXN1-208ENST00000507823 FBN1P35555 2871 aaKnown RBP12.16□□□□□ -0.46
SFXN1-208ENST00000507823 IGKV3OR2-268A0A0C4DH90 116 aa12.15□□□□□ -0.46
SFXN1-208ENST00000507823 TCL1BO95988 128 aa12.15□□□□□ -0.46
SFXN1-208ENST00000507823 SS18Q15532 418 aa12.15□□□□□ -0.46
SFXN1-208ENST00000507823 DAND5Q8N907 189 aa12.15□□□□□ -0.46
SFXN1-208ENST00000507823 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
SFXN1-208ENST00000507823 SFTA2Q6UW10 78 aa12.14□□□□□ -0.47
SFXN1-208ENST00000507823 LELP1Q5T871 98 aa12.14□□□□□ -0.47
SFXN1-208ENST00000507823 SOSTDC1Q6X4U4 206 aa12.14□□□□□ -0.47
SFXN1-208ENST00000507823 C11orf68Q9H3H3 251 aaKnown RBP12.14□□□□□ -0.47
SFXN1-208ENST00000507823 PSMB2P49721 201 aa12.13□□□□□ -0.47
SFXN1-208ENST00000507823 H3BNG1 76 aa12.13□□□□□ -0.47
SFXN1-208ENST00000507823 MEIG1Q5JSS6 88 aa12.12□□□□□ -0.47
SFXN1-208ENST00000507823 G3V4G9 280 aa12.12□□□□□ -0.47
SFXN1-208ENST00000507823 NPC2P61916 151 aa12.12□□□□□ -0.47
SFXN1-208ENST00000507823 SMCPP49901 116 aaPredicted RBP12.11□□□□□ -0.47
SFXN1-208ENST00000507823 C5orf38Q86SI9 138 aa12.11□□□□□ -0.47
SFXN1-208ENST00000507823 CYSRT1A8MQ03 144 aa12.1□□□□□ -0.47
SFXN1-208ENST00000507823 SCGB1C2P0DMR2 95 aa12.09□□□□□ -0.47
SFXN1-208ENST00000507823 CD164L2Q6UWJ8 174 aa12.09□□□□□ -0.47
SFXN1-208ENST00000507823 RETNQ9HD89 108 aa12.09□□□□□ -0.47
SFXN1-208ENST00000507823 STAB1Q9NY15 2570 aa12.09□□□□□ -0.47
SFXN1-208ENST00000507823 IBA57-AS1B1ANH7 110 aa12.09□□□□□ -0.47
SFXN1-208ENST00000507823 TRIAP1O43715 76 aa12.09□□□□□ -0.47
SFXN1-208ENST00000507823 Q8IZM0 81 aa12.09□□□□□ -0.47
SFXN1-208ENST00000507823 LINC00269Q8N2A0 174 aa12.09□□□□□ -0.47
SFXN1-208ENST00000507823 M0QXV9 152 aa12.08□□□□□ -0.47
SFXN1-208ENST00000507823 HTN3P15516 51 aa12.08□□□□□ -0.47
SFXN1-208ENST00000507823 XCL1P47992 114 aa12.08□□□□□ -0.47
SFXN1-208ENST00000507823 H7C2G1 150 aa12.08□□□□□ -0.48
SFXN1-208ENST00000507823 LINC01600Q96MT4 127 aa12.08□□□□□ -0.48
SFXN1-208ENST00000507823 TOMM7Q9P0U1 55 aa12.08□□□□□ -0.48
SFXN1-208ENST00000507823 ANK2Q01484 3957 aa12.08□□□□□ -0.48
SFXN1-208ENST00000507823 Q1RN00 199 aa12.07□□□□□ -0.48
SFXN1-208ENST00000507823 REG3AQ06141 175 aa12.07□□□□□ -0.48
SFXN1-208ENST00000507823 RPL13AP40429 203 aaKnown RBP12.07□□□□□ -0.48
SFXN1-208ENST00000507823 MTURNQ8N3F0 131 aa12.07□□□□□ -0.48
SFXN1-208ENST00000507823 Q8N3U1 123 aa12.07□□□□□ -0.48
SFXN1-208ENST00000507823 A0A0U1RRA0 63 aa12.06□□□□□ -0.48
SFXN1-208ENST00000507823 ETDBQ3ZM63 59 aa12.06□□□□□ -0.48
SFXN1-208ENST00000507823 PRR34Q9NV39 138 aa12.06□□□□□ -0.48
SFXN1-208ENST00000507823 ANGP03950 147 aaKnown RBP12.06□□□□□ -0.48
SFXN1-208ENST00000507823 CLPSL2Q6UWE3 100 aa12.06□□□□□ -0.48
SFXN1-208ENST00000507823 LYPD5Q6UWN5 251 aa12.06□□□□□ -0.48
SFXN1-208ENST00000507823 CHCHD10Q8WYQ3 142 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms