RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 GAGE2BQ13066 116 aa9.01□□□□□ -0.97
HMGCS1-203ENST00000507004 C5orf38Q86SI9 138 aa9.01□□□□□ -0.97
HMGCS1-203ENST00000507004 LINC01600Q96MT4 127 aa9.01□□□□□ -0.97
HMGCS1-203ENST00000507004 IMMP2LQ96T52 175 aa9.01□□□□□ -0.97
HMGCS1-203ENST00000507004 A0A1B0GVG6 124 aa9□□□□□ -0.97
HMGCS1-203ENST00000507004 SRSF3P84103 164 aaKnown RBP9□□□□□ -0.97
HMGCS1-203ENST00000507004 RNASE13Q5GAN3 156 aaKnown RBP9□□□□□ -0.97
HMGCS1-203ENST00000507004 TMEM136Q6ZRR5 245 aa9□□□□□ -0.97
HMGCS1-203ENST00000507004 MRPL35Q9NZE8 188 aaKnown RBP9□□□□□ -0.97
HMGCS1-203ENST00000507004 PYGO1Q9Y3Y4 419 aa9□□□□□ -0.97
HMGCS1-203ENST00000507004 HMCN2Q8NDA2 5059 aa9□□□□□ -0.97
HMGCS1-203ENST00000507004 IGHV3OR16-9A0A0B4J2B5 98 aa8.99□□□□□ -0.97
HMGCS1-203ENST00000507004 IFITM10A6NMD0 228 aa8.99□□□□□ -0.97
HMGCS1-203ENST00000507004 NPYP01303 97 aa8.99□□□□□ -0.97
HMGCS1-203ENST00000507004 ANAPC16Q96DE5 110 aa8.99□□□□□ -0.97
HMGCS1-203ENST00000507004 TGIF2-C20orf24A0A0A6YYL0 155 aa8.98□□□□□ -0.97
HMGCS1-203ENST00000507004 PRSS47A8MTI9 375 aa8.98□□□□□ -0.97
HMGCS1-203ENST00000507004 NDUFA1O15239 70 aa8.98□□□□□ -0.97
HMGCS1-203ENST00000507004 RAB14P61106 215 aa8.98□□□□□ -0.97
HMGCS1-203ENST00000507004 RPL39P62891 51 aaKnown RBP8.98□□□□□ -0.97
HMGCS1-203ENST00000507004 ORAOV1Q8WV07 137 aa8.98□□□□□ -0.97
HMGCS1-203ENST00000507004 PRELID3AQ96N28 172 aa8.98□□□□□ -0.97
HMGCS1-203ENST00000507004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.97□□□□□ -0.97
HMGCS1-203ENST00000507004 K7EMI3 77 aa8.97□□□□□ -0.97
HMGCS1-203ENST00000507004 MT-ND4LP03901 98 aa8.97□□□□□ -0.97
HMGCS1-203ENST00000507004 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
HMGCS1-203ENST00000507004 A0A0J9YXV3 536 aa8.96□□□□□ -0.98
HMGCS1-203ENST00000507004 NPSP0C0P6 89 aa8.96□□□□□ -0.98
HMGCS1-203ENST00000507004 SRSF9Q13242 221 aaKnown RBP eCLIP8.96□□□□□ -0.98
HMGCS1-203ENST00000507004 C9orf116Q5BN46 136 aaPredicted RBP8.96□□□□□ -0.98
HMGCS1-203ENST00000507004 MAP1LC3AQ9H492 121 aa8.96□□□□□ -0.98
HMGCS1-203ENST00000507004 TLX1NBP0CAT3 122 aa8.95□□□□□ -0.98
HMGCS1-203ENST00000507004 G0S2P27469 103 aa8.95□□□□□ -0.98
HMGCS1-203ENST00000507004 LINC01561Q8N1V8 128 aa8.95□□□□□ -0.98
HMGCS1-203ENST00000507004 C2orf88Q9BSF0 95 aa8.95□□□□□ -0.98
HMGCS1-203ENST00000507004 A0A087WZ39 114 aa8.94□□□□□ -0.98
HMGCS1-203ENST00000507004 Q6ZN92 141 aa8.94□□□□□ -0.98
HMGCS1-203ENST00000507004 TEX43Q6ZNM6 134 aa8.94□□□□□ -0.98
HMGCS1-203ENST00000507004 TMEM141Q96I45 108 aa8.94□□□□□ -0.98
HMGCS1-203ENST00000507004 A0A1W2PNN7 141 aa8.93□□□□□ -0.98
HMGCS1-203ENST00000507004 MT-ND6P03923 174 aa8.93□□□□□ -0.98
HMGCS1-203ENST00000507004 ORMDL2Q53FV1 153 aa8.93□□□□□ -0.98
HMGCS1-203ENST00000507004 FAM104AQ969W3 186 aa8.93□□□□□ -0.98
HMGCS1-203ENST00000507004 CYSLTR1Q9Y271 337 aa8.93□□□□□ -0.98
HMGCS1-203ENST00000507004 TRBV30A0A0K0K1B3 111 aa8.92□□□□□ -0.98
HMGCS1-203ENST00000507004 PAPPA-AS1Q5QFB9 102 aa8.92□□□□□ -0.98
HMGCS1-203ENST00000507004 Q8N8P6 123 aa8.92□□□□□ -0.98
HMGCS1-203ENST00000507004 OPRPNQ99935 248 aaPredicted RBP8.92□□□□□ -0.98
HMGCS1-203ENST00000507004 IGLV4-3A0A075B6K6 122 aa8.91□□□□□ -0.98
HMGCS1-203ENST00000507004 SEC11AP67812 179 aa8.91□□□□□ -0.98
HMGCS1-203ENST00000507004 LINC00242Q5T6M2 205 aa8.91□□□□□ -0.98
HMGCS1-203ENST00000507004 KRTAP10-8P60410 259 aa8.9□□□□□ -0.98
HMGCS1-203ENST00000507004 C2orf66Q6UXQ4 117 aa8.9□□□□□ -0.98
HMGCS1-203ENST00000507004 PACRGQ96M98 296 aaPredicted RBP8.9□□□□□ -0.98
HMGCS1-203ENST00000507004 VCX2Q9H322 139 aa8.9□□□□□ -0.98
HMGCS1-203ENST00000507004 NXT2Q9NPJ8 142 aaKnown RBP8.9□□□□□ -0.98
HMGCS1-203ENST00000507004 PSORS1C2Q9UIG4 136 aa8.9□□□□□ -0.98
HMGCS1-203ENST00000507004 LOC389332A0A1B0GUA5 103 aa8.89□□□□□ -0.99
HMGCS1-203ENST00000507004 CTDSP1Q9GZU7 261 aa8.89□□□□□ -0.99
HMGCS1-203ENST00000507004 C6orf48Q9UBA6 75 aa8.89□□□□□ -0.99
HMGCS1-203ENST00000507004 LINC01549A6NIU2 74 aa8.88□□□□□ -0.99
HMGCS1-203ENST00000507004 UBE2D1P51668 147 aa8.88□□□□□ -0.99
HMGCS1-203ENST00000507004 KIAA0087Q14695 138 aa8.88□□□□□ -0.99
HMGCS1-203ENST00000507004 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
HMGCS1-203ENST00000507004 UNQ6190/PRO20217Q6UXQ8 127 aa8.88□□□□□ -0.99
HMGCS1-203ENST00000507004 DIRC1Q969H9 104 aa8.88□□□□□ -0.99
HMGCS1-203ENST00000507004 TRAV9-1A0A075B6T8 112 aa8.87□□□□□ -0.99
HMGCS1-203ENST00000507004 NDUFC2-KCTD14E9PQ53 114 aa8.87□□□□□ -0.99
HMGCS1-203ENST00000507004 PRSS2P07478 247 aa8.87□□□□□ -0.99
HMGCS1-203ENST00000507004 PHF5AQ7RTV0 110 aaKnown RBP8.87□□□□□ -0.99
HMGCS1-203ENST00000507004 AMELXQ99217 191 aa8.87□□□□□ -0.99
HMGCS1-203ENST00000507004 C10orf25Q5T742 122 aa8.86□□□□□ -0.99
HMGCS1-203ENST00000507004 FAM19A3Q7Z5A8 133 aa8.86□□□□□ -0.99
HMGCS1-203ENST00000507004 IGLV7-43P04211 117 aa8.85□□□□□ -0.99
HMGCS1-203ENST00000507004 CKS1BP61024 79 aa8.85□□□□□ -0.99
HMGCS1-203ENST00000507004 HERVK_113P63121 156 aa8.85□□□□□ -0.99
HMGCS1-203ENST00000507004 ODF1Q14990 250 aa8.85□□□□□ -0.99
HMGCS1-203ENST00000507004 GAGE2EQ4V326 116 aa8.85□□□□□ -0.99
HMGCS1-203ENST00000507004 CLLU1Q5K131 121 aa8.85□□□□□ -0.99
HMGCS1-203ENST00000507004 UQCC3Q6UW78 93 aa8.85□□□□□ -0.99
HMGCS1-203ENST00000507004 TIMM17AQ99595 171 aa8.85□□□□□ -0.99
HMGCS1-203ENST00000507004 GAGE2DQ9UEU5 116 aa8.85□□□□□ -0.99
HMGCS1-203ENST00000507004 IGIPA6NJ69 53 aa8.84□□□□□ -0.99
HMGCS1-203ENST00000507004 Q8IZM0 81 aa8.84□□□□□ -0.99
HMGCS1-203ENST00000507004 TNXBP22105 4242 aa8.84□□□□□ -0.99
HMGCS1-203ENST00000507004 C6orf226Q5I0X4 101 aa8.83□□□□□ -1
HMGCS1-203ENST00000507004 M0QXV9 152 aa8.82□□□□□ -1
HMGCS1-203ENST00000507004 CXCL5P42830 114 aa8.82□□□□□ -1
HMGCS1-203ENST00000507004 UBE2BP63146 152 aa8.82□□□□□ -1
HMGCS1-203ENST00000507004 COX19Q49B96 90 aa8.82□□□□□ -1
HMGCS1-203ENST00000507004 LINC00173Q6ZV60 143 aa8.82□□□□□ -1
HMGCS1-203ENST00000507004 FAM19A5Q7Z5A7 132 aaPredicted RBP8.82□□□□□ -1
HMGCS1-203ENST00000507004 GEMIN7Q9H840 131 aaKnown RBP8.82□□□□□ -1
HMGCS1-203ENST00000507004 S100PP25815 95 aa8.81□□□□□ -1
HMGCS1-203ENST00000507004 TOMM6Q96B49 74 aa8.81□□□□□ -1
HMGCS1-203ENST00000507004 ALKBH7Q9BT30 221 aaPredicted RBP8.81□□□□□ -1
HMGCS1-203ENST00000507004 UBR4Q5T4S7 5183 aa8.81□□□□□ -1
HMGCS1-203ENST00000507004 FAM168BA1KXE4 195 aa8.8□□□□□ -1
HMGCS1-203ENST00000507004 H0Y9J4 135 aa8.8□□□□□ -1
HMGCS1-203ENST00000507004 C2orf82Q6UX34 121 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms