RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PPDPFQ9H3Y8 114 aa12.08□□□□□ -0.48
TRAPPC11-204ENST00000505676 PRO1854Q9UHT4 67 aa12.08□□□□□ -0.48
TRAPPC11-204ENST00000505676 CFC1BP0CG36 223 aa12.07□□□□□ -0.48
TRAPPC11-204ENST00000505676 CFC1P0CG37 223 aa12.07□□□□□ -0.48
TRAPPC11-204ENST00000505676 F5H768 121 aa12.07□□□□□ -0.48
TRAPPC11-204ENST00000505676 SFTA2Q6UW10 78 aa12.07□□□□□ -0.48
TRAPPC11-204ENST00000505676 APOMO95445 188 aa12.06□□□□□ -0.48
TRAPPC11-204ENST00000505676 MUSTN1Q8IVN3 82 aa12.06□□□□□ -0.48
TRAPPC11-204ENST00000505676 A4D1N5 150 aa12.06□□□□□ -0.48
TRAPPC11-204ENST00000505676 TSPAN13O95857 204 aa12.05□□□□□ -0.48
TRAPPC11-204ENST00000505676 LINC01561Q8N1V8 128 aa12.05□□□□□ -0.48
TRAPPC11-204ENST00000505676 MRPL23Q16540 153 aaKnown RBP12.04□□□□□ -0.48
TRAPPC11-204ENST00000505676 NOTCH3Q9UM47 2321 aa12.04□□□□□ -0.48
TRAPPC11-204ENST00000505676 F8W1H4 67 aa12.03□□□□□ -0.48
TRAPPC11-204ENST00000505676 IGLV4-60A0A075B6I1 120 aa12.03□□□□□ -0.48
TRAPPC11-204ENST00000505676 TRBV20-1A0A075B6N2 111 aa12.03□□□□□ -0.48
TRAPPC11-204ENST00000505676 Q9H8V8 135 aa12.03□□□□□ -0.48
TRAPPC11-204ENST00000505676 SS18Q15532 418 aa12.02□□□□□ -0.49
TRAPPC11-204ENST00000505676 ZNF625Q96I27 306 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC11-204ENST00000505676 F8P00451 2351 aa12.01□□□□□ -0.49
TRAPPC11-204ENST00000505676 A0A087WZ39 114 aa12.01□□□□□ -0.49
TRAPPC11-204ENST00000505676 ICOSQ9Y6W8 199 aa12.01□□□□□ -0.49
TRAPPC11-204ENST00000505676 IGHV3OR16-9A0A0B4J2B5 98 aa12.01□□□□□ -0.49
TRAPPC11-204ENST00000505676 PRSS2P07478 247 aa12.01□□□□□ -0.49
TRAPPC11-204ENST00000505676 RBX1P62877 108 aa12.01□□□□□ -0.49
TRAPPC11-204ENST00000505676 ERG28Q9UKR5 140 aa12.01□□□□□ -0.49
TRAPPC11-204ENST00000505676 LINC00959A0A1B0GUT2 108 aa12□□□□□ -0.49
TRAPPC11-204ENST00000505676 OXLD1Q5BKU9 147 aa12□□□□□ -0.49
TRAPPC11-204ENST00000505676 PRIMA1Q86XR5 153 aa12□□□□□ -0.49
TRAPPC11-204ENST00000505676 CELA1Q9UNI1 258 aa12□□□□□ -0.49
TRAPPC11-204ENST00000505676 TMEM262E9PQX1 116 aa11.99□□□□□ -0.49
TRAPPC11-204ENST00000505676 H3BNG1 76 aa11.99□□□□□ -0.49
TRAPPC11-204ENST00000505676 K7ERU9 68 aa11.99□□□□□ -0.49
TRAPPC11-204ENST00000505676 IGHV3-33P01772 117 aa11.99□□□□□ -0.49
TRAPPC11-204ENST00000505676 COX7B2Q8TF08 81 aa11.99□□□□□ -0.49
TRAPPC11-204ENST00000505676 C11orf68Q9H3H3 251 aaKnown RBP11.99□□□□□ -0.49
TRAPPC11-204ENST00000505676 DEFB4AO15263 64 aa11.99□□□□□ -0.49
TRAPPC11-204ENST00000505676 ADAMTSL4-AS1Q5T5F5 129 aa11.99□□□□□ -0.49
TRAPPC11-204ENST00000505676 KRTAP10-11P60412 298 aa11.98□□□□□ -0.49
TRAPPC11-204ENST00000505676 TEP1Q99973 2627 aaKnown RBP11.98□□□□□ -0.49
TRAPPC11-204ENST00000505676 OCIAD2Q56VL3 154 aa11.97□□□□□ -0.49
TRAPPC11-204ENST00000505676 LELP1Q5T871 98 aa11.97□□□□□ -0.49
TRAPPC11-204ENST00000505676 LOC107984156A0A0G2JMH3 177 aa11.96□□□□□ -0.49
TRAPPC11-204ENST00000505676 ARL17AQ8IVW1 177 aa11.96□□□□□ -0.49
TRAPPC11-204ENST00000505676 MEIG1Q5JSS6 88 aa11.96□□□□□ -0.49
TRAPPC11-204ENST00000505676 NIPBLQ6KC79 2804 aaeCLIP11.95□□□□□ -0.5
TRAPPC11-204ENST00000505676 LINC00308Q8TCZ7 52 aa11.94□□□□□ -0.5
TRAPPC11-204ENST00000505676 IGKV3OR2-268A0A0C4DH90 116 aa11.94□□□□□ -0.5
TRAPPC11-204ENST00000505676 TRBV30A0A0K0K1B3 111 aa11.94□□□□□ -0.5
TRAPPC11-204ENST00000505676 H3BMG7 143 aa11.94□□□□□ -0.5
TRAPPC11-204ENST00000505676 ATRQ13535 2644 aa11.93□□□□□ -0.5
TRAPPC11-204ENST00000505676 SCGB1C2P0DMR2 95 aa11.93□□□□□ -0.5
TRAPPC11-204ENST00000505676 PSMB2P49721 201 aa11.92□□□□□ -0.5
TRAPPC11-204ENST00000505676 Q1RN00 199 aa11.92□□□□□ -0.5
TRAPPC11-204ENST00000505676 A0A096LPF7 62 aa11.91□□□□□ -0.5
TRAPPC11-204ENST00000505676 IBA57-AS1B1ANH7 110 aa11.91□□□□□ -0.5
TRAPPC11-204ENST00000505676 EIF4EBP3O60516 100 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC11-204ENST00000505676 CD164L2Q6UWJ8 174 aa11.91□□□□□ -0.5
TRAPPC11-204ENST00000505676 Q8IZM0 81 aa11.91□□□□□ -0.5
TRAPPC11-204ENST00000505676 COX6CP09669 75 aa11.91□□□□□ -0.5
TRAPPC11-204ENST00000505676 HTN3P15516 51 aa11.9□□□□□ -0.5
TRAPPC11-204ENST00000505676 CXCL5P42830 114 aa11.9□□□□□ -0.5
TRAPPC11-204ENST00000505676 PRO0461Q9UI25 63 aa11.9□□□□□ -0.5
TRAPPC11-204ENST00000505676 M0QXV9 152 aa11.88□□□□□ -0.51
TRAPPC11-204ENST00000505676 REG3AQ06141 175 aa11.88□□□□□ -0.51
TRAPPC11-204ENST00000505676 TOMM7Q9P0U1 55 aa11.88□□□□□ -0.51
TRAPPC11-204ENST00000505676 TENM1Q9UKZ4 2725 aa11.88□□□□□ -0.51
TRAPPC11-204ENST00000505676 J3QR89 54 aa11.88□□□□□ -0.51
TRAPPC11-204ENST00000505676 ANGP03950 147 aaKnown RBP11.88□□□□□ -0.51
TRAPPC11-204ENST00000505676 C5orf38Q86SI9 138 aa11.88□□□□□ -0.51
TRAPPC11-204ENST00000505676 TCL1BO95988 128 aa11.87□□□□□ -0.51
TRAPPC11-204ENST00000505676 XCL1P47992 114 aa11.87□□□□□ -0.51
TRAPPC11-204ENST00000505676 ATXN8Q156A1 80 aa11.87□□□□□ -0.51
TRAPPC11-204ENST00000505676 LINC00269Q8N2A0 174 aa11.87□□□□□ -0.51
TRAPPC11-204ENST00000505676 VWFP04275 2813 aa11.87□□□□□ -0.51
TRAPPC11-204ENST00000505676 COX7A2LO14548 114 aa11.87□□□□□ -0.51
TRAPPC11-204ENST00000505676 C6orf226Q5I0X4 101 aa11.86□□□□□ -0.51
TRAPPC11-204ENST00000505676 CBY1Q9Y3M2 126 aa11.86□□□□□ -0.51
TRAPPC11-204ENST00000505676 DAND5Q8N907 189 aa11.85□□□□□ -0.51
TRAPPC11-204ENST00000505676 CHCHD10Q8WYQ3 142 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC11-204ENST00000505676 RPL13AP40429 203 aaKnown RBP11.84□□□□□ -0.51
TRAPPC11-204ENST00000505676 NPC2P61916 151 aa11.84□□□□□ -0.51
TRAPPC11-204ENST00000505676 WFDC2Q14508 124 aa11.84□□□□□ -0.51
TRAPPC11-204ENST00000505676 LYPD5Q6UWN5 251 aa11.84□□□□□ -0.51
TRAPPC11-204ENST00000505676 PRR34Q9NV39 138 aa11.84□□□□□ -0.51
TRAPPC11-204ENST00000505676 G3V4G9 280 aa11.84□□□□□ -0.51
TRAPPC11-204ENST00000505676 H7C2G1 150 aa11.84□□□□□ -0.51
TRAPPC11-204ENST00000505676 TRAV13-2A0A0B4J235 113 aa11.83□□□□□ -0.52
TRAPPC11-204ENST00000505676 TRIAP1O43715 76 aa11.83□□□□□ -0.52
TRAPPC11-204ENST00000505676 MUC7Q8TAX7 377 aa11.83□□□□□ -0.52
TRAPPC11-204ENST00000505676 RETNQ9HD89 108 aa11.83□□□□□ -0.52
TRAPPC11-204ENST00000505676 TRAV8-4A0A0B4J246 113 aa11.82□□□□□ -0.52
TRAPPC11-204ENST00000505676 LINC00158P58513 81 aa11.82□□□□□ -0.52
TRAPPC11-204ENST00000505676 COX17Q14061 63 aa11.82□□□□□ -0.52
TRAPPC11-204ENST00000505676 KPRPQ5T749 579 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC11-204ENST00000505676 SOSTDC1Q6X4U4 206 aa11.82□□□□□ -0.52
TRAPPC11-204ENST00000505676 MIR7-3HGQ8N6C7 128 aa11.82□□□□□ -0.52
TRAPPC11-204ENST00000505676 LINC01600Q96MT4 127 aa11.82□□□□□ -0.52
TRAPPC11-204ENST00000505676 MALP21145 153 aa11.82□□□□□ -0.52
TRAPPC11-204ENST00000505676 CFAP161Q6P656 301 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms