RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 SPATA25Q9BR10 227 aa10.16□□□□□ -0.78
TCOF1-207ENST00000504761 UBE2D4Q9Y2X8 147 aa10.16□□□□□ -0.78
TCOF1-207ENST00000504761 TMEM223A0PJW6 202 aa10.15□□□□□ -0.78
TCOF1-207ENST00000504761 CLUHP3Q96NS8 147 aa10.15□□□□□ -0.78
TCOF1-207ENST00000504761 SIGMAR1Q99720 223 aa10.15□□□□□ -0.78
TCOF1-207ENST00000504761 STAB1Q9NY15 2570 aa10.15□□□□□ -0.78
TCOF1-207ENST00000504761 F8W1H4 67 aa10.15□□□□□ -0.78
TCOF1-207ENST00000504761 RPL32P62910 135 aaKnown RBP10.15□□□□□ -0.78
TCOF1-207ENST00000504761 KPRPQ5T749 579 aaPredicted RBP10.15□□□□□ -0.78
TCOF1-207ENST00000504761 IGIPA6NJ69 53 aa10.15□□□□□ -0.79
TCOF1-207ENST00000504761 NANOS2P60321 138 aaKnown RBP10.15□□□□□ -0.79
TCOF1-207ENST00000504761 NTN5Q8WTR8 489 aaPredicted RBP10.15□□□□□ -0.79
TCOF1-207ENST00000504761 NDUFA1O15239 70 aa10.14□□□□□ -0.79
TCOF1-207ENST00000504761 UBE2D3P61077 147 aa10.14□□□□□ -0.79
TCOF1-207ENST00000504761 UBE2D2P62837 147 aa10.14□□□□□ -0.79
TCOF1-207ENST00000504761 PYGO1Q9Y3Y4 419 aa10.14□□□□□ -0.79
TCOF1-207ENST00000504761 A0A0J9YWU9 116 aa10.13□□□□□ -0.79
TCOF1-207ENST00000504761 GAGE2BQ13066 116 aa10.13□□□□□ -0.79
TCOF1-207ENST00000504761 OVOL2Q9BRP0 275 aa10.13□□□□□ -0.79
TCOF1-207ENST00000504761 NCR3O14931 201 aa10.13□□□□□ -0.79
TCOF1-207ENST00000504761 WFDC2Q14508 124 aa10.13□□□□□ -0.79
TCOF1-207ENST00000504761 LINC00694P0DN24 101 aa10.12□□□□□ -0.79
TCOF1-207ENST00000504761 COL6A5A8TX70 2615 aa10.12□□□□□ -0.79
TCOF1-207ENST00000504761 PIK3CD-AS1Q5SR53 167 aa10.12□□□□□ -0.79
TCOF1-207ENST00000504761 C2orf91Q6ZV80 131 aa10.11□□□□□ -0.79
TCOF1-207ENST00000504761 CLEC2BQ92478 149 aa10.11□□□□□ -0.79
TCOF1-207ENST00000504761 FHL3Q13643 280 aa10.11□□□□□ -0.79
TCOF1-207ENST00000504761 IGLV2-18A0A075B6J9 118 aa10.1□□□□□ -0.79
TCOF1-207ENST00000504761 PPDPFLQ8WWR9 84 aa10.1□□□□□ -0.79
TCOF1-207ENST00000504761 UBE2BP63146 152 aa10.1□□□□□ -0.79
TCOF1-207ENST00000504761 Q9UF83 564 aa10.1□□□□□ -0.79
TCOF1-207ENST00000504761 UBR5O95071 2799 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-207ENST00000504761 MIAQ16674 131 aa10.1□□□□□ -0.79
TCOF1-207ENST00000504761 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
TCOF1-207ENST00000504761 CRYBA4P53673 196 aa10.09□□□□□ -0.79
TCOF1-207ENST00000504761 DEFB105AQ8NG35 78 aa10.09□□□□□ -0.79
TCOF1-207ENST00000504761 BAALC-AS2P0C853 105 aa10.09□□□□□ -0.79
TCOF1-207ENST00000504761 TIRAPP58753 221 aa10.09□□□□□ -0.79
TCOF1-207ENST00000504761 HIST1H4AP62805 103 aaKnown RBP10.09□□□□□ -0.79
TCOF1-207ENST00000504761 FHL2Q14192 279 aa10.09□□□□□ -0.79
TCOF1-207ENST00000504761 LECT2O14960 151 aa10.08□□□□□ -0.8
TCOF1-207ENST00000504761 XAGE1AQ9HD64 81 aa10.08□□□□□ -0.8
TCOF1-207ENST00000504761 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
TCOF1-207ENST00000504761 BEAN1Q3B7T3 259 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 Q6ZTC4 211 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 PTH2Q96A98 100 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 FAM19A4Q96LR4 140 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 IGLV4-60A0A075B6I1 120 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 LINC00959A0A1B0GUT2 108 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 H7C423 109 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 C11orf72Q8NBR9 251 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 KLK5Q9Y337 293 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-207ENST00000504761 ITPR1Q14643 2758 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 IGKV2-24A0A0C4DH68 120 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 UBE2D1P51668 147 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 TM2D2Q9BX73 214 aa10.07□□□□□ -0.8
TCOF1-207ENST00000504761 F8WEM9 126 aa10.06□□□□□ -0.8
TCOF1-207ENST00000504761 CXCL5P42830 114 aa10.06□□□□□ -0.8
TCOF1-207ENST00000504761 G3V4G9 280 aa10.06□□□□□ -0.8
TCOF1-207ENST00000504761 KRTAP24-1Q3LI83 254 aa10.06□□□□□ -0.8
TCOF1-207ENST00000504761 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
TCOF1-207ENST00000504761 LINC01620Q4KN68 170 aa10.06□□□□□ -0.8
TCOF1-207ENST00000504761 LINC00315P59091 139 aa10.05□□□□□ -0.8
TCOF1-207ENST00000504761 KLK9Q2XQG4 91 aa10.05□□□□□ -0.8
TCOF1-207ENST00000504761 KRTAP1-3Q8IUG1 177 aa10.05□□□□□ -0.8
TCOF1-207ENST00000504761 NOTCH1P46531 2555 aa10.05□□□□□ -0.8
TCOF1-207ENST00000504761 TRAV10A0A0B4J240 114 aa10.05□□□□□ -0.8
TCOF1-207ENST00000504761 ANKRD29Q8N6D5 301 aa10.05□□□□□ -0.8
TCOF1-207ENST00000504761 INAFM2P0DMQ5 153 aa10.04□□□□□ -0.8
TCOF1-207ENST00000504761 LELP1Q5T871 98 aa10.04□□□□□ -0.8
TCOF1-207ENST00000504761 LINC00308Q8TCZ7 52 aa10.04□□□□□ -0.8
TCOF1-207ENST00000504761 ITPR2Q14571 2701 aa10.04□□□□□ -0.8
TCOF1-207ENST00000504761 MRPS36P82909 103 aaKnown RBP10.04□□□□□ -0.8
TCOF1-207ENST00000504761 TMEM126AQ9H061 195 aa10.04□□□□□ -0.8
TCOF1-207ENST00000504761 POM121L12Q8N7R1 296 aa10.04□□□□□ -0.8
TCOF1-207ENST00000504761 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
TCOF1-207ENST00000504761 ZFAND6Q6FIF0 208 aa10.03□□□□□ -0.8
TCOF1-207ENST00000504761 COX6A2Q02221 97 aa10.03□□□□□ -0.8
TCOF1-207ENST00000504761 RNF183Q96D59 192 aa10.03□□□□□ -0.8
TCOF1-207ENST00000504761 SPANXCQ9NY87 97 aa10.02□□□□□ -0.81
TCOF1-207ENST00000504761 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-207ENST00000504761 TCL1BO95988 128 aa10.02□□□□□ -0.81
TCOF1-207ENST00000504761 ETDCA0A1B0GVM5 59 aa10.01□□□□□ -0.81
TCOF1-207ENST00000504761 TSPEAR-AS2P59090 65 aa10.01□□□□□ -0.81
TCOF1-207ENST00000504761 CD164L2Q6UWJ8 174 aa10.01□□□□□ -0.81
TCOF1-207ENST00000504761 WDFY3Q8IZQ1 3526 aa10.01□□□□□ -0.81
TCOF1-207ENST00000504761 ORMDL1Q9P0S3 153 aa10.01□□□□□ -0.81
TCOF1-207ENST00000504761 C15orf53Q8NAA6 179 aa10□□□□□ -0.81
TCOF1-207ENST00000504761 H0YGX0 51 aa10□□□□□ -0.81
TCOF1-207ENST00000504761 CELA1Q9UNI1 258 aa10□□□□□ -0.81
TCOF1-207ENST00000504761 HAMPP81172 84 aa10□□□□□ -0.81
TCOF1-207ENST00000504761 M0R2N4 97 aa9.99□□□□□ -0.81
TCOF1-207ENST00000504761 ANAPC13Q9BS18 74 aa9.99□□□□□ -0.81
TCOF1-207ENST00000504761 IBA57-AS1B1ANH7 110 aa9.99□□□□□ -0.81
TCOF1-207ENST00000504761 UFSP1Q6NVU6 142 aa9.99□□□□□ -0.81
TCOF1-207ENST00000504761 SPANXB1Q9NS25 103 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-207ENST00000504761 DSCR8Q96T75 97 aa9.98□□□□□ -0.81
TCOF1-207ENST00000504761 DMDP11532 3685 aa9.97□□□□□ -0.81
TCOF1-207ENST00000504761 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms