RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 SPANXB1Q9NS25 103 aaPredicted RBP9.12□□□□□ -0.95
LMNA-220ENST00000504687 TMEM262E9PQX1 116 aa9.11□□□□□ -0.95
LMNA-220ENST00000504687 NHLRC4P0CG21 123 aaPredicted RBP9.11□□□□□ -0.95
LMNA-220ENST00000504687 HINT1P49773 126 aaPredicted RBP9.11□□□□□ -0.95
LMNA-220ENST00000504687 MRAPQ8TCY5 172 aa9.11□□□□□ -0.95
LMNA-220ENST00000504687 SMIM1B2RUZ4 78 aa9.1□□□□□ -0.95
LMNA-220ENST00000504687 SS18Q15532 418 aa9.1□□□□□ -0.95
LMNA-220ENST00000504687 ORAOV1Q8WV07 137 aa9.1□□□□□ -0.95
LMNA-220ENST00000504687 PRR34Q9NV39 138 aa9.1□□□□□ -0.95
LMNA-220ENST00000504687 A0A087WZ39 114 aa9.09□□□□□ -0.95
LMNA-220ENST00000504687 TRAV8-3A0A0A6YYJ7 113 aa9.09□□□□□ -0.95
LMNA-220ENST00000504687 SPINK8P0C7L1 97 aa9.09□□□□□ -0.95
LMNA-220ENST00000504687 NDUFA1O15239 70 aa9.08□□□□□ -0.96
LMNA-220ENST00000504687 TIMM17BO60830 172 aa9.08□□□□□ -0.96
LMNA-220ENST00000504687 SCGB1D4Q6XE38 83 aa9.08□□□□□ -0.96
LMNA-220ENST00000504687 CEND1Q8N111 149 aa9.08□□□□□ -0.96
LMNA-220ENST00000504687 REG3AQ06141 175 aa9.07□□□□□ -0.96
LMNA-220ENST00000504687 NDUFA12Q9UI09 145 aa9.07□□□□□ -0.96
LMNA-220ENST00000504687 TENM3Q9P273 2699 aa9.07□□□□□ -0.96
LMNA-220ENST00000504687 A0A0J9YXY3 114 aa9.06□□□□□ -0.96
LMNA-220ENST00000504687 A6NDN8 102 aa9.06□□□□□ -0.96
LMNA-220ENST00000504687 BATFQ16520 125 aa9.06□□□□□ -0.96
LMNA-220ENST00000504687 ESRGQ1W209 222 aa9.06□□□□□ -0.96
LMNA-220ENST00000504687 SFTA2Q6UW10 78 aa9.06□□□□□ -0.96
LMNA-220ENST00000504687 CD164L2Q6UWJ8 174 aa9.06□□□□□ -0.96
LMNA-220ENST00000504687 Q6ZVH6 145 aa9.06□□□□□ -0.96
LMNA-220ENST00000504687 C10orf126Q8N4M7 172 aa9.06□□□□□ -0.96
LMNA-220ENST00000504687 IGHV3-64A0A075B6Q5 118 aa9.05□□□□□ -0.96
LMNA-220ENST00000504687 TMEM238C9JI98 176 aa9.05□□□□□ -0.96
LMNA-220ENST00000504687 ANGP03950 147 aaKnown RBP9.05□□□□□ -0.96
LMNA-220ENST00000504687 HERV-K104P63124 156 aa9.05□□□□□ -0.96
LMNA-220ENST00000504687 LINC00269Q8N2A0 174 aa9.05□□□□□ -0.96
LMNA-220ENST00000504687 HIST1H4GQ99525 98 aa9.05□□□□□ -0.96
LMNA-220ENST00000504687 PPDPFQ9H3Y8 114 aa9.05□□□□□ -0.96
LMNA-220ENST00000504687 HUWE1Q7Z6Z7 4374 aaKnown RBP9.05□□□□□ -0.96
LMNA-220ENST00000504687 TRAV8-4A0A0B4J246 113 aa9.04□□□□□ -0.96
LMNA-220ENST00000504687 A0A1B0GWB2 263 aa9.04□□□□□ -0.96
LMNA-220ENST00000504687 LINC01556Q5JQF7 62 aa9.04□□□□□ -0.96
LMNA-220ENST00000504687 ZNF625Q96I27 306 aaPredicted RBP9.04□□□□□ -0.96
LMNA-220ENST00000504687 SPANXDQ9BXN6 97 aa9.04□□□□□ -0.96
LMNA-220ENST00000504687 SPANXCQ9NY87 97 aa9.04□□□□□ -0.96
LMNA-220ENST00000504687 LITAFQ99732 161 aa9.03□□□□□ -0.96
LMNA-220ENST00000504687 FBN3Q75N90 2809 aa9.03□□□□□ -0.96
LMNA-220ENST00000504687 TMEM238LA0A1B0GVL6 79 aa9.02□□□□□ -0.97
LMNA-220ENST00000504687 A6NJY4 79 aa9.02□□□□□ -0.97
LMNA-220ENST00000504687 IGHV3-30P01768 117 aa9.02□□□□□ -0.97
LMNA-220ENST00000504687 DNAH10OSP0CZ25 163 aa9.02□□□□□ -0.97
LMNA-220ENST00000504687 IGHV3-30-5P0DP03 117 aa9.02□□□□□ -0.97
LMNA-220ENST00000504687 GCSHP23434 173 aa9.02□□□□□ -0.97
LMNA-220ENST00000504687 PTTG1IPP53801 180 aa9.02□□□□□ -0.97
LMNA-220ENST00000504687 FXYD2P54710 66 aa9.02□□□□□ -0.97
LMNA-220ENST00000504687 COX7B2Q8TF08 81 aa9.02□□□□□ -0.97
LMNA-220ENST00000504687 CHCHD10Q8WYQ3 142 aaPredicted RBP9.02□□□□□ -0.97
LMNA-220ENST00000504687 UPK3BQ9BT76 320 aa9.02□□□□□ -0.97
LMNA-220ENST00000504687 TAX1BP3O14907 124 aa9.01□□□□□ -0.97
LMNA-220ENST00000504687 SRSF9Q13242 221 aaKnown RBP eCLIP9.01□□□□□ -0.97
LMNA-220ENST00000504687 MIAQ16674 131 aa9.01□□□□□ -0.97
LMNA-220ENST00000504687 ENHOQ6UWT2 76 aa9.01□□□□□ -0.97
LMNA-220ENST00000504687 WFDC10BQ8IUB3 73 aa9.01□□□□□ -0.97
LMNA-220ENST00000504687 Q8IZM0 81 aa9.01□□□□□ -0.97
LMNA-220ENST00000504687 PRKDCP78527 4128 aaKnown RBP9.01□□□□□ -0.97
LMNA-220ENST00000504687 IGKV3OR2-268A0A0C4DH90 116 aa9□□□□□ -0.97
LMNA-220ENST00000504687 IFITM1P13164 125 aa9□□□□□ -0.97
LMNA-220ENST00000504687 FOXI1Q12951 378 aa9□□□□□ -0.97
LMNA-220ENST00000504687 Q8N3U1 123 aa9□□□□□ -0.97
LMNA-220ENST00000504687 Q9H8V8 135 aa9□□□□□ -0.97
LMNA-220ENST00000504687 KLK12Q9UKR0 248 aa9□□□□□ -0.97
LMNA-220ENST00000504687 A0A1B0GV90 55 aa8.99□□□□□ -0.97
LMNA-220ENST00000504687 COX7A2LO14548 114 aa8.99□□□□□ -0.97
LMNA-220ENST00000504687 SMIM13P0DJ93 91 aa8.99□□□□□ -0.97
LMNA-220ENST00000504687 XCL1P47992 114 aa8.99□□□□□ -0.97
LMNA-220ENST00000504687 CIRBPQ14011 172 aaKnown RBP8.99□□□□□ -0.97
LMNA-220ENST00000504687 COX11Q9Y6N1 276 aa8.99□□□□□ -0.97
LMNA-220ENST00000504687 K7EP13 123 aa8.98□□□□□ -0.97
LMNA-220ENST00000504687 CXCL5P42830 114 aa8.98□□□□□ -0.97
LMNA-220ENST00000504687 CCL18P55774 89 aa8.98□□□□□ -0.97
LMNA-220ENST00000504687 C5orf38Q86SI9 138 aa8.98□□□□□ -0.97
LMNA-220ENST00000504687 COPS9Q8WXC6 57 aa8.98□□□□□ -0.97
LMNA-220ENST00000504687 KLK5Q9Y337 293 aaPredicted RBP8.98□□□□□ -0.97
LMNA-220ENST00000504687 DNAH9Q9NYC9 4486 aa8.98□□□□□ -0.97
LMNA-220ENST00000504687 CRPP02741 224 aa8.97□□□□□ -0.97
LMNA-220ENST00000504687 RPL24P83731 157 aaKnown RBP8.97□□□□□ -0.97
LMNA-220ENST00000504687 CLPSL2Q6UWE3 100 aa8.97□□□□□ -0.97
LMNA-220ENST00000504687 MEGF8Q7Z7M0 2845 aa8.96□□□□□ -0.97
LMNA-220ENST00000504687 APOMO95445 188 aa8.96□□□□□ -0.98
LMNA-220ENST00000504687 IGHV3-33P01772 117 aa8.96□□□□□ -0.98
LMNA-220ENST00000504687 KIAA0087Q14695 138 aa8.96□□□□□ -0.98
LMNA-220ENST00000504687 KRTAP26-1Q6PEX3 210 aa8.96□□□□□ -0.98
LMNA-220ENST00000504687 LINC00588Q9Y4M8 146 aa8.96□□□□□ -0.98
LMNA-220ENST00000504687 C9orf118A6NHY6 69 aa8.95□□□□□ -0.98
LMNA-220ENST00000504687 IBA57-AS1B1ANH7 110 aa8.95□□□□□ -0.98
LMNA-220ENST00000504687 IGLL5B9A064 214 aa8.95□□□□□ -0.98
LMNA-220ENST00000504687 ADAMTSL4-AS1Q5T5F5 129 aa8.95□□□□□ -0.98
LMNA-220ENST00000504687 NHP2Q9NX24 153 aaKnown RBP8.95□□□□□ -0.98
LMNA-220ENST00000504687 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.94□□□□□ -0.98
LMNA-220ENST00000504687 GAGE12HA6NDE8 117 aa8.94□□□□□ -0.98
LMNA-220ENST00000504687 MUSTN1Q8IVN3 82 aa8.94□□□□□ -0.98
LMNA-220ENST00000504687 UBE2WQ96B02 151 aa8.94□□□□□ -0.98
LMNA-220ENST00000504687 A0A0B4J2C4 111 aa8.93□□□□□ -0.98
LMNA-220ENST00000504687 NUPR2A6NF83 97 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms