RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 XCL1P47992 114 aa6.98□□□□□ -1.29
UBE2D3-212ENST00000502563 TEX43Q6ZNM6 134 aa6.98□□□□□ -1.29
UBE2D3-212ENST00000502563 CBLN2Q8IUK8 224 aa6.98□□□□□ -1.29
UBE2D3-212ENST00000502563 LINC01561Q8N1V8 128 aa6.98□□□□□ -1.29
UBE2D3-212ENST00000502563 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.97□□□□□ -1.29
UBE2D3-212ENST00000502563 IGKV3OR2-268A0A0C4DH90 116 aa6.97□□□□□ -1.29
UBE2D3-212ENST00000502563 F8WDY8 70 aa6.97□□□□□ -1.29
UBE2D3-212ENST00000502563 KRTAP10-1P60331 282 aa6.97□□□□□ -1.29
UBE2D3-212ENST00000502563 SEC11AP67812 179 aa6.97□□□□□ -1.29
UBE2D3-212ENST00000502563 KIAA1109Q2LD37 5005 aa6.97□□□□□ -1.29
UBE2D3-212ENST00000502563 FA2HQ7L5A8 372 aa6.97□□□□□ -1.29
UBE2D3-212ENST00000502563 C2orf88Q9BSF0 95 aa6.97□□□□□ -1.29
UBE2D3-212ENST00000502563 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.96□□□□□ -1.3
UBE2D3-212ENST00000502563 TRAV13-1A0A0B4J241 112 aa6.96□□□□□ -1.3
UBE2D3-212ENST00000502563 IFITM10A6NMD0 228 aa6.96□□□□□ -1.3
UBE2D3-212ENST00000502563 COX7A2LO14548 114 aa6.96□□□□□ -1.3
UBE2D3-212ENST00000502563 APOMO95445 188 aa6.96□□□□□ -1.3
UBE2D3-212ENST00000502563 UBE2D1P51668 147 aa6.96□□□□□ -1.3
UBE2D3-212ENST00000502563 LINC00173Q6ZV60 143 aa6.96□□□□□ -1.3
UBE2D3-212ENST00000502563 OR10D4PQ8NGN7 298 aa6.96□□□□□ -1.3
UBE2D3-212ENST00000502563 CHCHD1Q96BP2 118 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-212ENST00000502563 VCX2Q9H322 139 aa6.96□□□□□ -1.3
UBE2D3-212ENST00000502563 PKIGQ9Y2B9 76 aa6.96□□□□□ -1.3
UBE2D3-212ENST00000502563 A0A087WZ39 114 aa6.95□□□□□ -1.3
UBE2D3-212ENST00000502563 hDV102S1A0JD36 115 aa6.95□□□□□ -1.3
UBE2D3-212ENST00000502563 COLCA2A8K830 154 aa6.95□□□□□ -1.3
UBE2D3-212ENST00000502563 LINC00242Q5T6M2 205 aa6.95□□□□□ -1.3
UBE2D3-212ENST00000502563 URB1-AS1Q96HZ7 61 aa6.95□□□□□ -1.3
UBE2D3-212ENST00000502563 OPRPNQ99935 248 aaPredicted RBP6.95□□□□□ -1.3
UBE2D3-212ENST00000502563 A0A096LNJ9 63 aa6.94□□□□□ -1.3
UBE2D3-212ENST00000502563 XGP55808 180 aa6.94□□□□□ -1.3
UBE2D3-212ENST00000502563 HERVK_113P63121 156 aa6.94□□□□□ -1.3
UBE2D3-212ENST00000502563 CIRBPQ14011 172 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-212ENST00000502563 RNASE13Q5GAN3 156 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-212ENST00000502563 C2orf48Q96LS8 159 aa6.94□□□□□ -1.3
UBE2D3-212ENST00000502563 SCGB3A1Q96QR1 104 aa6.94□□□□□ -1.3
UBE2D3-212ENST00000502563 HBDP02042 147 aa6.93□□□□□ -1.3
UBE2D3-212ENST00000502563 SLPIP03973 132 aa6.93□□□□□ -1.3
UBE2D3-212ENST00000502563 MALP21145 153 aa6.93□□□□□ -1.3
UBE2D3-212ENST00000502563 APOBP04114 4563 aaKnown RBP6.93□□□□□ -1.3
UBE2D3-212ENST00000502563 HSPG2P98160 4391 aa6.92□□□□□ -1.3
UBE2D3-212ENST00000502563 IGHV3-64A0A075B6Q5 118 aa6.92□□□□□ -1.3
UBE2D3-212ENST00000502563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-212ENST00000502563 ZNF561-AS1K7EIQ3 104 aa6.92□□□□□ -1.3
UBE2D3-212ENST00000502563 ATP5LO75964 103 aa6.92□□□□□ -1.3
UBE2D3-212ENST00000502563 TRGC2P03986 189 aa6.92□□□□□ -1.3
UBE2D3-212ENST00000502563 RNF151Q2KHN1 245 aa6.92□□□□□ -1.3
UBE2D3-212ENST00000502563 PDZD11Q5EBL8 140 aa6.92□□□□□ -1.3
UBE2D3-212ENST00000502563 SDIM1Q6ZPB5 146 aa6.92□□□□□ -1.3
UBE2D3-212ENST00000502563 IGLV5-45A0A087WSX0 123 aa6.91□□□□□ -1.3
UBE2D3-212ENST00000502563 TINCRA0A1B0GVN0 87 aa6.91□□□□□ -1.3
UBE2D3-212ENST00000502563 FUSP35637 526 aaKnown RBP eCLIP6.91□□□□□ -1.3
UBE2D3-212ENST00000502563 PMVKQ15126 192 aa6.91□□□□□ -1.3
UBE2D3-212ENST00000502563 RYR1P21817 5038 aa6.91□□□□□ -1.3
UBE2D3-212ENST00000502563 S100A1P23297 94 aa6.9□□□□□ -1.3
UBE2D3-212ENST00000502563 Q8N1X5 172 aa6.9□□□□□ -1.3
UBE2D3-212ENST00000502563 CHAC1Q9BUX1 264 aa6.9□□□□□ -1.3
UBE2D3-212ENST00000502563 CST9LQ9H4G1 147 aa6.9□□□□□ -1.3
UBE2D3-212ENST00000502563 LINC00474Q9P2X8 69 aa6.9□□□□□ -1.3
UBE2D3-212ENST00000502563 HERC2O95714 4834 aa6.9□□□□□ -1.31
UBE2D3-212ENST00000502563 DNAH8Q96JB1 4490 aa6.89□□□□□ -1.31
UBE2D3-212ENST00000502563 IGLV4-69A0A075B6H9 119 aa6.89□□□□□ -1.31
UBE2D3-212ENST00000502563 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
UBE2D3-212ENST00000502563 HIGD2BQ4VC39 106 aa6.89□□□□□ -1.31
UBE2D3-212ENST00000502563 C5orf38Q86SI9 138 aa6.89□□□□□ -1.31
UBE2D3-212ENST00000502563 CARD19Q96LW7 228 aa6.89□□□□□ -1.31
UBE2D3-212ENST00000502563 MRPL35Q9NZE8 188 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-212ENST00000502563 FAM30AQ9NZY2 134 aa6.89□□□□□ -1.31
UBE2D3-212ENST00000502563 IGLC3P0DOY3 106 aa6.88□□□□□ -1.31
UBE2D3-212ENST00000502563 COX6A2Q02221 97 aa6.88□□□□□ -1.31
UBE2D3-212ENST00000502563 SPAG11BQ08648 103 aa6.88□□□□□ -1.31
UBE2D3-212ENST00000502563 KIAA0087Q14695 138 aa6.88□□□□□ -1.31
UBE2D3-212ENST00000502563 GEMIN7Q9H840 131 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-212ENST00000502563 TRAV12-1A0A0B4J245 112 aa6.87□□□□□ -1.31
UBE2D3-212ENST00000502563 HSBP1O75506 76 aa6.87□□□□□ -1.31
UBE2D3-212ENST00000502563 TLX1NBP0CAT3 122 aa6.87□□□□□ -1.31
UBE2D3-212ENST00000502563 SCXQ7RTU7 201 aa6.87□□□□□ -1.31
UBE2D3-212ENST00000502563 BAGE3Q86Y29 109 aa6.87□□□□□ -1.31
UBE2D3-212ENST00000502563 Q8IZM0 81 aa6.87□□□□□ -1.31
UBE2D3-212ENST00000502563 ORAOV1Q8WV07 137 aa6.87□□□□□ -1.31
UBE2D3-212ENST00000502563 CAMK2N2Q96S95 79 aa6.87□□□□□ -1.31
UBE2D3-212ENST00000502563 TRBV30A0A0K0K1B3 111 aa6.86□□□□□ -1.31
UBE2D3-212ENST00000502563 EPM2AB3EWF7 344 aa6.86□□□□□ -1.31
UBE2D3-212ENST00000502563 NDUFA1O15239 70 aa6.86□□□□□ -1.31
UBE2D3-212ENST00000502563 CXCL5P42830 114 aa6.86□□□□□ -1.31
UBE2D3-212ENST00000502563 ODF1Q14990 250 aa6.86□□□□□ -1.31
UBE2D3-212ENST00000502563 LINC01620Q4KN68 170 aa6.86□□□□□ -1.31
UBE2D3-212ENST00000502563 SPACA4Q8TDM5 124 aa6.86□□□□□ -1.31
UBE2D3-212ENST00000502563 PACRGQ96M98 296 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-212ENST00000502563 CDKN2A-AS1Q9UH64 79 aa6.86□□□□□ -1.31
UBE2D3-212ENST00000502563 A0A0J9YXV3 536 aa6.85□□□□□ -1.31
UBE2D3-212ENST00000502563 LINC00310P59036 64 aa6.85□□□□□ -1.31
UBE2D3-212ENST00000502563 ZC2HC1BQ5TFG8 222 aa6.85□□□□□ -1.31
UBE2D3-212ENST00000502563 Q6ZRU5 148 aa6.85□□□□□ -1.31
UBE2D3-212ENST00000502563 CIRBP-AS1Q8TBR5 109 aa6.85□□□□□ -1.31
UBE2D3-212ENST00000502563 LOC107984640A0A0U1RRK4 108 aa6.84□□□□□ -1.31
UBE2D3-212ENST00000502563 SMIM1B2RUZ4 78 aa6.84□□□□□ -1.31
UBE2D3-212ENST00000502563 H3BRM9 83 aa6.84□□□□□ -1.31
UBE2D3-212ENST00000502563 SCO1O75880 301 aa6.84□□□□□ -1.31
UBE2D3-212ENST00000502563 PMCHL1Q16048 86 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms